Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00743 ATGGTGGCTTCATTGTTGGGAAGTCAAGAGAAAGCAGAGGATGCAATTTTCTACTCATATAATCGATACATTAATGGGTTTGCAGCCATGCTTGATGAAGAAGAAGCTGCGATTATTGCAAGGCAGCCAAACGTCGTTTCAGTCTTCTTGAACAGAGGAAGAAAACTGCATACAACCCGGACATGGGATTTTCTCCGACTGGAGTCGAATGGAGAAATTCATGAAGCCTCAGCTTGGAAGAAGGCTAGATTTGGCGAAGATACCATTATTGGAAACCTTGATACTGGCGTTTGGCCGGAATCAAAGAGCTTCAGTGACGAAGGTCTTGGTCCAGTCCCTTCAAGGTGGAAAGGCATATGCCAAACACAGTCCAATGTCCGCTGTAACAGGAAGCTGATCGGAGCTCGGTTTTTCATCAAAGGGTTTGAATCCTACGCCGGAAAACTTAACGCCACTTACCATACAGTTCGAGACAGTGAGGGCCATGGCTCCCATACTCTGTCGACTGCAGGTGGAAGCTTTGTTTCTAAAGCTAGTGTCTTTGGAAATGGCAATGGGACTGCTAAAGGAGGCTCCCCGAAAGCCAGAGTCGCCGCGTACAAAGTATGCTGGCCACCCATCGACGGAAACCAGTGCTTCGACTCCGATATTCTCGCTGGATTTGAGGCTGCGATCGGCGACGGCGTCGACGTTCTCTCCGTGTCGTTAGGAGGTGGTGCTTCGGAGTTTTTCGAAGACGGGATTGCGATTGGTTCTTTTCATGCTATGAAGAACGGAATTGTCGTGGTTAGTTCCGCCGGGAACTCTGGACCAACTCCCGGCACTGTTTCTAATGTGGCGCCATGGATGTTGACAGTCGGAGCTAGCACAATCGACAGAGATTTCGCCAGCTATGTCGGCCTAGGAAATAAAAAGCATCTCCGGGGAGCAAGTATTTCAGATAAGAACTTACCTGCTCGGAAATTCTACCCTTTGATCGCTGCCGCTGATGCCAAAGCTGCAAATCAATCGACAGCAGATGCAATATTGTGCTCTAAAGATTCTCTTGACCCTAAGAAGGCCAAGGGGAAAATTGTGCTCTGCCTTCGAGGCGGCAATGGAAGAGTTGAGAAGGGCTACAATGCAGCCGCCGCCGGCGCCGTCGGAATGATTTTGGCAAATGACGTAGCCAATGGCAATGAAATTATTGCAGATACTCACCTTATCCCTGCTACCCATTTATCTTTCAACGATGGCCAAGCTGTATTTGCATACATCAACTCCACCAAGAGTCCCAAGGCATACATTACTAATGCAAGAACAGAGGTGGAAACGGAGCCAGCTCCGTTTATGGCCTCGTTCTCGTCGAGAGGTCCTAACACGGTGGAGGAAGCAATTCTCAAGCCTGATATCACAGCTCCTGGCGTGAATGTTATTGCTGCCTATACAGAAGGACAGAGTCCGACCGAATTGGATTTCGACAAGCGTCGAATTCCTTTCAATGTAATGTCCGGCACTTCCATGTCGTGCCCTCATGTTTCCGGCATTGTCGGCCTTCTCAAAACCCTTCATCCCGATTGGAGTCCGGCTGCCATTAAGTCTGCAATCATGACGACAGCTAGAACCAGAGACAACAAAGTTCAGCCGATGTTGGACTCCACCATGGAAAAGGCCACGCCTTTCGCCTACGGCTCCGGCCACGTCAGACCCAACCGGGCAATGGCTCCCGGCCTCATCTACGACCTGACAGTAAAAGACTACCTGAACTTCTTATGCGCTCGTGGCTACGGCGAAACCTACCTCAAATTGTTCGTCAACGAGACCTACACTTGTCCGAAGTCGTTCAGCCTGACGGATTTCAACTACCCTTCCATCTCCATTCCAGTTCAAATCAAAACCTCTGTGACGGTCACTCGAACGGTTAAGAATGTCGGCACTCCGGGCACTTACGTGGCCACAGTCAAAGCTCCCCGCGGGATTTCAGTTTCGGTGAGTCCAAAGACGTTGACTTTTAAGAAAGTAGGGGAGGAGAAAAAGTTCAGTGTTGTGTTGAAGTCCAGAAGCTCGAAGATCGTTCGCCAGGACTACGGCTTTGGATCGTTGACGTGGTCGGATGGTAAGCACTACGTGAGGAGTCCTATCATTGTTAAATTAAGTTAA 2139 49.42 MVASLLGSQEKAEDAIFYSYNRYINGFAAMLDEEEAAIIARQPNVVSVFLNRGRKLHTTRTWDFLRLESNGEIHEASAWKKARFGEDTIIGNLDTGVWPESKSFSDEGLGPVPSRWKGICQTQSNVRCNRKLIGARFFIKGFESYAGKLNATYHTVRDSEGHGSHTLSTAGGSFVSKASVFGNGNGTAKGGSPKARVAAYKVCWPPIDGNQCFDSDILAGFEAAIGDGVDVLSVSLGGGASEFFEDGIAIGSFHAMKNGIVVVSSAGNSGPTPGTVSNVAPWMLTVGASTIDRDFASYVGLGNKKHLRGASISDKNLPARKFYPLIAAADAKAANQSTADAILCSKDSLDPKKAKGKIVLCLRGGNGRVEKGYNAAAAGAVGMILANDVANGNEIIADTHLIPATHLSFNDGQAVFAYINSTKSPKAYITNARTEVETEPAPFMASFSSRGPNTVEEAILKPDITAPGVNVIAAYTEGQSPTELDFDKRRIPFNVMSGTSMSCPHVSGIVGLLKTLHPDWSPAAIKSAIMTTARTRDNKVQPMLDSTMEKATPFAYGSGHVRPNRAMAPGLIYDLTVKDYLNFLCARGYGETYLKLFVNETYTCPKSFSLTDFNYPSISIPVQIKTSVTVTRTVKNVGTPGTYVATVKAPRGISVSVSPKTLTFKKVGEEKKFSVVLKSRSSKIVRQDYGFGSLTWSDGKHYVRSPIIVKLS 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27525668 27528557 - Bpe012652.1 Bpe03g00743 101248

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00743 712 CDD Peptidases_S8_3 55 533 IPR034197 -
Bpe03g00743 712 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 57 IPR037045 -
Bpe03g00743 712 PRINTS Subtilisin serine protease family (S8) signature 158 171 IPR015500 -
Bpe03g00743 712 PRINTS Subtilisin serine protease family (S8) signature 497 513 IPR015500 -
Bpe03g00743 712 PRINTS Subtilisin serine protease family (S8) signature 85 104 IPR015500 -
Bpe03g00743 712 SUPERFAMILY Subtilisin-like 56 571 IPR036852 GO:0004252|GO:0006508
Bpe03g00743 712 CDD PA_subtilisin_like 298 429 - -
Bpe03g00743 712 Gene3D - 584 711 - -
Bpe03g00743 712 Pfam Peptidase inhibitor I9 7 57 IPR010259 -
Bpe03g00743 712 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 2 711 - -
Bpe03g00743 712 SUPERFAMILY PA domain 351 431 IPR046450 -
Bpe03g00743 712 Pfam PA domain 337 414 IPR003137 -
Bpe03g00743 712 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 711 IPR045051 -
Bpe03g00743 712 Pfam Fibronectin type-III domain 612 709 IPR041469 -
Bpe03g00743 712 ProSiteProfiles Serine proteases, subtilase domain profile. 61 567 - -
Bpe03g00743 712 Pfam Subtilase family 85 545 IPR000209 GO:0006508|GO:0008236
Bpe03g00743 712 ProSitePatterns Serine proteases, subtilase family, serine active site. 498 508 IPR023828 -
Bpe03g00743 712 Gene3D - 292 436 - -
Bpe03g00743 712 Gene3D Peptidase S8/S53 domain 87 580 IPR036852 GO:0004252|GO:0006508
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00743 - - - egr:104450399 1009.98
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01937 Bpe-Chr2:21312356 Bpe03g00743 Bpe-Chr3:27525668 0 dispersed
Bpe03g00743 Bpe-Chr3:27525668 Bpe11g00991 Bpe-Chr11:7390326 0 dispersed
Bpe08g01470 Bpe-Chr8:15412701 Bpe03g00743 Bpe-Chr3:27525668 9.15E-49 dispersed
Bpe13g00876 Bpe-Chr13:14890201 Bpe03g00743 Bpe-Chr3:27525668 1.79E-131 dispersed
Bpe02g00336 Bpe-Chr2:2194518 Bpe03g00743 Bpe-Chr3:27525668 3.61E-170 transposed
Bpe15g01385 Bpe-Chr15:21793883 Bpe03g00743 Bpe-Chr3:27525668 2.73E-165 transposed
Bpe12g00166 Bpe-Chr12:1260059 Bpe03g00743 Bpe-Chr3:27525668 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe09g00335 . 1 769 Subtilisin-like Serine Gene Family AT1G04110 67.3 1.2e-308 1055.4
Bpe02g00336 . 1 704 Subtilisin-like Serine Gene Family AT1G20150 54.0 3.8e-209 724.9
Bpe02g00336 . 1 450 Subtilisin-like Serine Gene Family AT1G20160 58.3 1.1e-141 500.4
Bpe15g01385 . 11 465 Subtilisin-like Serine Gene Family AT1G20160 50.4 4.9e-118 421.8
Bpe11g01032 . 13 834 Subtilisin-like Serine Gene Family AT1G30600 64.1 6.6e-308 1053.1
Bpe07g00357 . 52 769 Subtilisin-like Serine Gene Family AT1G32940 54.5 1.6e-222 769.2
Bpe07g00357 . 52 769 Subtilisin-like Serine Gene Family AT1G32950 53.2 4.6e-217 751.1
Bpe07g00357 . 25 769 Subtilisin-like Serine Gene Family AT1G32960 54.9 3.4e-234 808.1
Bpe11g01011 . 77 861 Subtilisin-like Serine Gene Family AT1G62340 57.9 1.6e-250 862.4
Bpe12g00166 . 2 682 Subtilisin-like Serine Gene Family AT2G04160 66.3 6.2e-268 920.2
Bpe11g00991 . 29 765 Subtilisin-like Serine Gene Family AT2G04160 59.5 3.4e-258 887.9
Bpe03g00743 . 2 711 Subtilisin-like Serine Gene Family AT2G04160 60.5 8.1e-252 866.7
Bpe02g01937 . 27 765 Subtilisin-like Serine Gene Family AT2G04160 56.2 8.1e-244 840.1
Bpe01g00619 . 22 762 Subtilisin-like Serine Gene Family AT2G05920 70.5 1.9e-309 1058.1
Bpe15g00311 . 33 766 Subtilisin-like Serine Gene Family AT2G05920 56.6 1.1e-232 803.1
Bpe13g00117 . 26 761 Subtilisin-like Serine Gene Family AT2G05920 56.6 1.7e-230 795.8
Bpe05g00038 . 26 761 Subtilisin-like Serine Gene Family AT2G05920 54.0 2.3e-219 758.8
Bpe03g00102 . 28 778 Subtilisin-like Serine Gene Family AT2G05920 50.3 4.7e-212 734.6
Bpe14g01337 . 31 768 Subtilisin-like Serine Gene Family AT2G05920 50.3 2.5e-205 712.2
Bpe03g00692 . 23 772 Subtilisin-like Serine Gene Family AT2G05920 51.3 9.8e-202 700.3
Bpe02g01781 . 35 764 Subtilisin-like Serine Gene Family AT2G05920 52.5 3.7e-201 698.4
Bpe10g00715 . 9 572 Subtilisin-like Serine Gene Family AT2G05920 55.0 1.1e-163 573.9
Bpe10g00705 . 1 522 Subtilisin-like Serine Gene Family AT2G05920 55.9 7.1e-160 561.2
Bpe13g01102 . 6 819 Subtilisin-like Serine Gene Family AT2G19170 81.3 0.0e+00 1347.4
Bpe02g02068 . 22 817 Subtilisin-like Serine Gene Family AT2G19170 82.3 0.0e+00 1340.9
Bpe13g00117 . 7 761 Subtilisin-like Serine Gene Family AT3G14067 53.1 6.7e-222 767.3
Bpe15g00311 . 18 766 Subtilisin-like Serine Gene Family AT3G14067 53.3 1.1e-221 766.5
Bpe01g00619 . 3 760 Subtilisin-like Serine Gene Family AT3G14067 52.9 2.6e-218 755.4
Bpe10g00705 . 1 529 Subtilisin-like Serine Gene Family AT3G14067 68.5 4.8e-212 734.6
Bpe05g00038 . 9 761 Subtilisin-like Serine Gene Family AT3G14067 50.8 3.8e-209 724.9
Bpe14g01337 . 27 767 Subtilisin-like Serine Gene Family AT3G14067 50.4 3.3e-200 695.3
Bpe03g00692 . 19 778 Subtilisin-like Serine Gene Family AT3G14067 50.8 1.8e-198 689.5
Bpe10g00715 . 6 578 Subtilisin-like Serine Gene Family AT3G14067 52.9 4.5e-149 525.4
Bpe03g00692 . 28 780 Subtilisin-like Serine Gene Family AT3G14240 74.7 0.0e+00 1154.0
Bpe10g00715 . 1 580 Subtilisin-like Serine Gene Family AT3G14240 79.2 4.9e-273 937.2
Bpe14g01337 . 34 768 Subtilisin-like Serine Gene Family AT3G14240 58.6 4.3e-245 844.3
Bpe13g00117 . 28 757 Subtilisin-like Serine Gene Family AT3G14240 54.2 4.4e-221 764.6
Bpe15g00311 . 35 765 Subtilisin-like Serine Gene Family AT3G14240 53.0 4.5e-218 754.6
Bpe01g00619 . 26 756 Subtilisin-like Serine Gene Family AT3G14240 50.3 1.7e-209 726.1
Bpe02g01781 . 38 760 Subtilisin-like Serine Gene Family AT3G14240 51.3 2.7e-207 718.8
Bpe10g00705 . 1 520 Subtilisin-like Serine Gene Family AT3G14240 51.8 4.6e-146 515.4
Bpe04g01539 . 4 563 Subtilisin-like Serine Gene Family AT4G00230 50.9 7.6e-149 524.2
Bpe02g00758 . 2 288 Subtilisin-like Serine Gene Family AT4G00230 51.4 7.5e-72 268.5
Bpe07g00357 . 52 769 Subtilisin-like Serine Gene Family AT4G10510 53.3 6.5e-219 757.3
Bpe07g00357 . 22 764 Subtilisin-like Serine Gene Family AT4G10520 55.0 1.2e-228 789.6
Bpe07g00357 . 22 764 Subtilisin-like Serine Gene Family AT4G10530 52.9 1.8e-216 749.2
Bpe07g00357 . 24 769 Subtilisin-like Serine Gene Family AT4G10540 53.1 3.9e-230 794.7
Bpe07g00357 . 52 769 Subtilisin-like Serine Gene Family AT4G10550 52.3 6.1e-217 750.7
Bpe11g01032 . 10 834 Subtilisin-like Serine Gene Family AT4G20430 66.9 0.0e+00 1123.2
Bpe02g01926 . 1 285 Subtilisin-like Serine Gene Family AT4G21320 75.2 1.4e-129 459.1
Bpe07g00357 . 26 764 Subtilisin-like Serine Gene Family AT4G21630 51.2 4.9e-201 698.0
Bpe07g00357 . 26 764 Subtilisin-like Serine Gene Family AT4G21650 51.0 1.3e-206 716.5
Bpe08g00325 . 60 765 Subtilisin-like Serine Gene Family AT4G26330 57.4 2.6e-247 851.7
Bpe13g01102 . 6 819 Subtilisin-like Serine Gene Family AT4G30020 80.8 0.0e+00 1344.3
Bpe02g02068 . 5 817 Subtilisin-like Serine Gene Family AT4G30020 80.7 0.0e+00 1341.3
Bpe14g01337 . 22 773 Subtilisin-like Serine Gene Family AT4G34980 73.3 0.0e+00 1136.3
Bpe03g00692 . 21 780 Subtilisin-like Serine Gene Family AT4G34980 54.4 2.5e-229 792.0
Bpe13g00117 . 22 757 Subtilisin-like Serine Gene Family AT4G34980 51.5 2.7e-207 718.8
Bpe15g00311 . 29 765 Subtilisin-like Serine Gene Family AT4G34980 50.6 6.9e-203 704.1
Bpe01g00619 . 24 756 Subtilisin-like Serine Gene Family AT4G34980 50.3 2.6e-202 702.2
Bpe10g00715 . 1 580 Subtilisin-like Serine Gene Family AT4G34980 55.5 3.4e-178 622.1
Bpe10g00705 . 1 523 Subtilisin-like Serine Gene Family AT4G34980 53.5 1.4e-150 530.4
Bpe04g01539 . 21 563 Subtilisin-like Serine Gene Family AT5G03620 59.4 2.8e-188 655.2
Bpe08g01470 . 2 453 Subtilisin-like Serine Gene Family AT5G03620 52.2 2.1e-127 453.0
Bpe02g00758 . 1 279 Subtilisin-like Serine Gene Family AT5G03620 60.5 7.5e-93 338.2
Bpe08g00475 . 268 1018 Subtilisin-like Serine Gene Family AT5G19660 75.0 0.0e+00 1169.1
Bpe11g01032 . 34 610 Subtilisin-like Serine Gene Family AT5G44530 68.9 5.7e-240 827.0
Bpe08g00737 . 1 493 Subtilisin-like Serine Gene Family AT5G45640 51.7 1.4e-136 483.8
Bpe08g00737 . 1 495 Subtilisin-like Serine Gene Family AT5G45650 56.8 3.1e-158 555.8
Bpe03g00102 . 23 782 Subtilisin-like Serine Gene Family AT5G51750 70.0 0.0e+00 1107.4
Bpe15g00311 . 33 766 Subtilisin-like Serine Gene Family AT5G51750 52.7 6.5e-225 777.3
Bpe13g00117 . 17 761 Subtilisin-like Serine Gene Family AT5G51750 52.4 1.5e-224 776.2
Bpe05g00038 . 25 761 Subtilisin-like Serine Gene Family AT5G51750 52.3 2.3e-222 768.8
Bpe10g00715 . 1 580 Subtilisin-like Serine Gene Family AT5G51750 50.3 3.0e-161 565.8
Bpe13g00876 . 626 1185 Subtilisin-like Serine Gene Family AT5G58840 50.3 8.5e-147 517.3
Bpe13g00876 . 625 1352 Subtilisin-like Serine Gene Family AT5G59120 50.1 1.7e-190 662.9
Bpe11g00991 . 14 768 Subtilisin-like Serine Gene Family AT5G59810 68.6 4.7e-308 1053.5
Bpe02g01937 . 15 768 Subtilisin-like Serine Gene Family AT5G59810 64.2 9.6e-285 976.1
Bpe03g00743 . 2 712 Subtilisin-like Serine Gene Family AT5G59810 63.5 1.8e-267 918.7
Bpe12g00166 . 1 682 Subtilisin-like Serine Gene Family AT5G59810 63.3 7.9e-247 850.1
Bpe15g00311 . 32 767 Subtilisin-like Serine Gene Family AT5G67360 72.5 0.0e+00 1091.3
Bpe13g00117 . 7 762 Subtilisin-like Serine Gene Family AT5G67360 70.9 0.0e+00 1084.3
Bpe05g00038 . 10 762 Subtilisin-like Serine Gene Family AT5G67360 66.9 1.7e-294 1008.4
Bpe02g01781 . 17 765 Subtilisin-like Serine Gene Family AT5G67360 61.7 6.7e-267 916.8
Bpe01g00619 . 14 761 Subtilisin-like Serine Gene Family AT5G67360 56.4 1.1e-229 793.1
Bpe03g00102 . 25 778 Subtilisin-like Serine Gene Family AT5G67360 54.6 2.1e-228 788.9
Bpe03g00692 . 20 775 Subtilisin-like Serine Gene Family AT5G67360 50.5 4.6e-207 718.0
Bpe14g01337 . 34 768 Subtilisin-like Serine Gene Family AT5G67360 51.2 8.6e-206 713.8
Bpe10g00715 . 1 575 Subtilisin-like Serine Gene Family AT5G67360 53.6 6.5e-161 564.7
Bpe10g00705 . 1 522 Subtilisin-like Serine Gene Family AT5G67360 54.4 4.2e-152 535.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000094 2 9 4 4 4 9 0 9 9 7 6 10 16 7 9 22 9 5 21 9 7 5 6 12 12 10 2 10 10 2 247
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe03g00743 Bpe_Chr03 FPKM 0.0 0.0 0.0 0.0 0.335896 0.0 0.0 0.0 0.0 0.0