Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00745 CCTTCTGCGATCTTCATCATGGCGGAGCAAGAGACGTTCGCTTTCCAGGCCGAGATCAACCAGCTTCTGAGTTTGATCATTAACACTTTCTACAGCAACAAGGAGATCTTTCTCCGTGAACTTATTAGCAATTCTTCCGATGCCCTGGACAAGATTAGGTTTGAGAGTCTGACAGATAAGAGTAAGCTGGATGCTCAAAAAGAACTCTTCATTCACATTGTACCTGACAAGACAAATAACACATTATCTATCATAGACAGTGGTATTGGCATGACAAAAGCTGGTAAGTGCGCAGCAAGAGTTTGTGTGTTTACTGACTCTGGTATTTCTTTCAAATGTTTTTTAATATTGTTGATGTTGGTTACAGATTTGGTGAACAATTTGGGTACAATTGCAAGGTCTGGTACCAAGGAATTCATGGAAGCTATTGCTGCTGGGGCTGATGTGAGTATGATTGGACAATTTGGTGTTGGTTTCTATTCAGCTTACCTGGTGGCTGAGAAGGTCATCGTTACCACAAAGCACAATGATGACGAACAATATGTGTGGGAATCCCAAGCTGGAGGATCATTCACTGTTACCAGGGACACTTCTGGTGAGAATCTTGGTAGGGGTACAAAGATAACCTTATATTTGAAGGAAGATCAACTTGAATATCTTGAGGAGCGTCGTGTTAAGGATTTAATTAAGAAGCACTCTGAGTTTATTAGTTACCCCATCTCTCTCTGGACGGAGAAGACCACTGAGAAAGAGATCTCTGATGATGAAGATGAGGAAGAGAAGAAGGCAGCGGAAGGAGAGGTTGAGGAGGTAGATGAAGAAAAGGAAAAGGAAGAGAAGAAAAAGAAGAAGATCAAGGAGGTATCATATGAGTGGTCTTTGGTGAACAAGCAGAAGCCTATTTGGATGAGAAAACCTGAAGAAATCACTAAAGAGGAGTATGCTGCATTCTACAAGAGCCTCACCAATGATTGGGAGGAGCACCTAGCGGTTAAGCATTTTTCAGTTGAAGGCCAACTTGAATTTAAGGCTGTCCTCTTTGTTCCCAAGAGGGCTCCTTTTGACCTGTTCGACACAAAGAAGAAGCCCAACAACATCAAACTGTATGTTCGTCGAGTGTTCATCATGGACAACTGTGAGGAATTGATTCCGGAGTATCTTAGCTTTGTAAAGGGCATAGTTGATTCTGAGGATTTGCCTTTGAACATCTCCAGAGAAATGCTTCAACAGAATAAGATTTTGAAGGTCATTAGGAAGAATTTGGTCAAAAAGTGCATTGAGCTCTTCTTTGAAATTGCAGAAAACAAGGAAGACTACAATAAGTTCTATGAAGCTTTCTCTAAAAACCTGAAGCTCGGCATCCATGAAGACTCCACCAATAAGACAAAGATTGCTGAGCTGCTCCGATACCATTCCACCAAGAGCGGTGATGAAATGACCAGCCTGAAGGATTACGTAACCAGAATGAAGGAGGGCCAGAATGACATCTACTACATCACTGGTGAAAGCAAGAAGGCTGTTGAAAATTCTCCCTTCCTCGAGAAGCTGAAGAAAAAGGGATATGAAGTTCTCTACATGGTGGATGCTATTGACGAGTACGCAATTGGACAACTCAAGGAGTTTGAGGGAAAGAAGTTGGTCTCTGCAACAAAAGAGGGTCTGAAACTGGAGGAGACTGAGGATGAGAAGAAAAAGAAGGAAACCTTGAAGGAGAAGTTTGAAGGACTGTGCGGTGTGATCAAGGAAGTGTTGGGTGACAAAGTAGAGAAGGTAGTGGTCTCTGACCGAGTTGTTGACTCTCCCTGCTGTCTGGTGACGGGTGAGTATGGATGGACGGCAAACATGGAGAGGATCATGAAAGCGCAGGCATTGAGAGACAACAACATGGCTGGCTATATGTCAAGCAAGAAAACAATGGAGATAAACCCGGAGAATCCTATCATGGAGGAGCTGAGGAAGAGAGCTGATGCAGACAAGAACGACAAGTCAGTGAAGGACCTGGTTCTACTCCTCTTCGAGACCTCCCTTCTCACCTCTGGGTTTAGCCTTGATGACCCCAACACCTTCGGCAACAGGATCCATAGGATGTTGAAGCTTGGCCTCAGCATCGACGATGATGGTGCTGATGGAGATGCTGATGCGGACATGCCACCCTTGGAGGATGCGGATGTGGATGCCGAGGGCAGCAAGATGGAAGAAGTTGACTGA 2208 44.16 PSAIFIMAEQETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQKELFIHIVPDKTNNTLSIIDSGIGMTKAGKCAARVCVFTDSGISFKCFLILLMLVTDLVNNLGTIARSGTKEFMEAIAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKITLYLKEDQLEYLEERRVKDLIKKHSEFISYPISLWTEKTTEKEISDDEDEEEKKAAEGEVEEVDEEKEKEEKKKKKIKEVSYEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEELIPEYLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCIELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSTNKTKIAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAIGQLKEFEGKKLVSATKEGLKLEETEDEKKKKETLKEKFEGLCGVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDNNMAGYMSSKKTMEINPENPIMEELRKRADADKNDKSVKDLVLLLFETSLLTSGFSLDDPNTFGNRIHRMLKLGLSIDDDGADGDADADMPPLEDADVDAEGSKMEEVD 735
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27533125 27536052 + Bpe012654.1 Bpe03g00745 101250

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00745 735 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 215 IPR003594 -
Bpe03g00745 735 Coils Coil 556 576 - -
Bpe03g00745 735 Gene3D - 465 551 - -
Bpe03g00745 735 MobiDBLite consensus disorder prediction 251 273 - -
Bpe03g00745 735 MobiDBLite consensus disorder prediction 248 278 - -
Bpe03g00745 735 PANTHER HEAT SHOCK PROTEIN 81-2 7 96 - -
Bpe03g00745 735 PANTHER HEAT SHOCK PROTEIN 81-2 119 733 - -
Bpe03g00745 735 Hamap Chaperone protein HtpG [htpG]. 8 698 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bpe03g00745 735 PIRSF HSP90_HTPG 119 735 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bpe03g00745 735 PIRSF HSP90_HTPG 3 95 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bpe03g00745 735 CDD HATPase_Hsp90-like 20 236 - -
Bpe03g00745 735 SUPERFAMILY HSP90 C-terminal domain 576 697 IPR037196 -
Bpe03g00745 735 Coils Coil 254 291 - -
Bpe03g00745 735 Gene3D - 117 262 IPR036890 -
Bpe03g00745 735 ProSitePatterns Heat shock hsp90 proteins family signature. 31 40 IPR019805 GO:0005524|GO:0006457|GO:0051082
Bpe03g00745 735 Gene3D - 6 96 IPR036890 -
Bpe03g00745 735 Gene3D - 552 701 IPR037196 -
Bpe03g00745 735 MobiDBLite consensus disorder prediction 706 735 - -
Bpe03g00745 735 Pfam Hsp90 protein 218 714 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bpe03g00745 735 Gene3D - 296 464 - -
Bpe03g00745 735 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 10 247 IPR036890 -
Bpe03g00745 735 SUPERFAMILY Ribosomal protein S5 domain 2-like 297 552 IPR020568 -
Bpe03g00745 735 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 7 96 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bpe03g00745 735 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 119 733 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Bpe03g00745 735 PRINTS 90kDa heat shock protein signature 11 31 IPR020575 -
Bpe03g00745 735 PRINTS 90kDa heat shock protein signature 32 54 IPR020575 -
Bpe03g00745 735 PRINTS 90kDa heat shock protein signature 204 221 IPR020575 -
Bpe03g00745 735 PRINTS 90kDa heat shock protein signature 222 240 IPR020575 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00745 K04079 HSP90A, htpG; molecular chaperone HtpG - zju:107416736 1169.84
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe03g00745 Bpe08g01086 CCT
Bpe03g00745 Bpe09g00109 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00745 Bpe-Chr3:27533125 Bpe12g00442 Bpe-Chr12:10196057 0 dispersed
Bpe03g00745 Bpe-Chr3:27533125 Bpe08g01086 Bpe-Chr8:12965762 0 wgd
Bpe03g00745 Bpe-Chr3:27533125 Bpe09g00109 Bpe-Chr9:738247 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g722 . . . . Bpe09g00109 Bpe08g01086 . . Cmo16g01031 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Blo10g00880 Bda05g00671 Bda12g00984 . Bpe03g00745 Bma07g01240 . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000587 3 3 3 2 4 2 5 5 4 3 3 3 4 4 3 4 3 7 3 3 3 4 5 0 4 3 1 4 4 3 102
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe03g00745 Bpe_Chr03 FPKM 3.43239 4.137558 0.433207 1.657207 1.667269 1.673242 1.301784 3.573283 2.989533 2.412993