Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00757 ATGCCCATCGCAAACGTCATACGCATTATGCGCCGGATCCTACCCTCGCACGCCAAGATTTCAGACGATGCCAAAGAGACGATCCAAGAGTGCGTGTCGGAGTACATAAGCTTCATCACCGGCGAGGCCAACGAGCGGTGCCAGCGGGAGCAGAGAAAGACTGTGACTGCGGAGGACGTGCTCTGGGCGATGGGGAAGTTGGGGTTCGACGATTACGTGGAGCCGCTCACCGTTTACCTGAGCAGATACCGGGAGACGGAGAACGAAAGGACTCGGGTGGAGCCCCCCCTTTTGAGGCGTGGGTCAGGGGATTATGGGTCTCCGGTTGGGATTGTTAGTGGGTACGGGCCGGGTTATCAAGTTGGGTATTTTGATCCCATGGGTGGGTATTATGGTGGGTCAGGTGGTGGGTCTTCTTCTGCTCCAGGTGGATTTGACCCGTTTCCTCCCTTTAAATGA 459 56.43 MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYVEPLTVYLSRYRETENERTRVEPPLLRRGSGDYGSPVGIVSGYGPGYQVGYFDPMGGYYGGSGGGSSSAPGGFDPFPPFK 152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27614733 27615191 - Bpe012666.1 Bpe03g00757 101262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00757 152 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 1 101 - -
Bpe03g00757 152 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 1 64 IPR003958 -
Bpe03g00757 152 SUPERFAMILY Histone-fold 1 94 IPR009072 GO:0046982
Bpe03g00757 152 Gene3D Histone, subunit A 1 101 IPR009072 GO:0046982
Bpe03g00757 152 PRINTS CCAAT-binding transcription factor subunit A signature 66 84 - -
Bpe03g00757 152 PRINTS CCAAT-binding transcription factor subunit A signature 47 65 - -
Bpe03g00757 152 PRINTS CCAAT-binding transcription factor subunit A signature 28 46 - -
Bpe03g00757 152 ProSitePatterns NF-YB/HAP3 subunit signature. 31 47 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bpe03g00757 152 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 1 101 IPR027113 GO:0001228|GO:0006355|GO:0016602
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00757 Bpe-Chr3:27614733 Bpe07g00646 Bpe-Chr7:13218659 3.23E-46 dispersed
Bpe03g00757 Bpe-Chr3:27614733 Bpe09g00129 Bpe-Chr9:873594 1.10E-43 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21119 PF00808 CBFD_NFYB_HMF 2.70E-25 CL0012 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00757 K08065 - csv:116402762 202.601