Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe03g00757 | ATGCCCATCGCAAACGTCATACGCATTATGCGCCGGATCCTACCCTCGCACGCCAAGATTTCAGACGATGCCAAAGAGACGATCCAAGAGTGCGTGTCGGAGTACATAAGCTTCATCACCGGCGAGGCCAACGAGCGGTGCCAGCGGGAGCAGAGAAAGACTGTGACTGCGGAGGACGTGCTCTGGGCGATGGGGAAGTTGGGGTTCGACGATTACGTGGAGCCGCTCACCGTTTACCTGAGCAGATACCGGGAGACGGAGAACGAAAGGACTCGGGTGGAGCCCCCCCTTTTGAGGCGTGGGTCAGGGGATTATGGGTCTCCGGTTGGGATTGTTAGTGGGTACGGGCCGGGTTATCAAGTTGGGTATTTTGATCCCATGGGTGGGTATTATGGTGGGTCAGGTGGTGGGTCTTCTTCTGCTCCAGGTGGATTTGACCCGTTTCCTCCCTTTAAATGA | 459 | 56.43 | MPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYVEPLTVYLSRYRETENERTRVEPPLLRRGSGDYGSPVGIVSGYGPGYQVGYFDPMGGYYGGSGGGSSSAPGGFDPFPPFK | 152 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 27614733 | 27615191 | - | Bpe012666.1 | Bpe03g00757 | 101262 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe03g00757 | 152 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 | 1 | 101 | - | - | |
Bpe03g00757 | 152 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 1 | 64 | IPR003958 | - | |
Bpe03g00757 | 152 | SUPERFAMILY | Histone-fold | 1 | 94 | IPR009072 | GO:0046982 | |
Bpe03g00757 | 152 | Gene3D | Histone, subunit A | 1 | 101 | IPR009072 | GO:0046982 | |
Bpe03g00757 | 152 | PRINTS | CCAAT-binding transcription factor subunit A signature | 66 | 84 | - | - | |
Bpe03g00757 | 152 | PRINTS | CCAAT-binding transcription factor subunit A signature | 47 | 65 | - | - | |
Bpe03g00757 | 152 | PRINTS | CCAAT-binding transcription factor subunit A signature | 28 | 46 | - | - | |
Bpe03g00757 | 152 | ProSitePatterns | NF-YB/HAP3 subunit signature. | 31 | 47 | IPR003956 | GO:0005634|GO:0006355|GO:0043565 | |
Bpe03g00757 | 152 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 1 | 101 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00757 | Bpe-Chr3:27614733 | Bpe07g00646 | Bpe-Chr7:13218659 | 3.23E-46 | dispersed | |
Bpe03g00757 | Bpe-Chr3:27614733 | Bpe09g00129 | Bpe-Chr9:873594 | 1.10E-43 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21119 | PF00808 | CBFD_NFYB_HMF | 2.70E-25 | CL0012 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe03g00757 | K08065 | - | csv:116402762 | 202.601 |