Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe03g00760 | ATGGGCTCTACTGTTGCTGGGTCCGAGCAGAATCGAATCACCGATGGAGATGTTCCCGGCGATCCGAATGGGACTGAGTTTCCGGATTGCGTAGAAGCTCGCACTACTCTTACAGGCGGCGCTAGGTACAAGCTGATGACTCCGGCGAAGCTTCCGATCTCTAGGGCTACTTGCATTACGATCCCACCGGGGATCAGCCCTTCTTCATTTTTGGAGTCTCCCGTTCTGCTCACTAACATGAAGGTTGAGCCTTCTCCTACCACTGGCTCCTTTATAAAGTCTCATATGGTTCATGGCTATTCCAGTTCAGGAACATATCCTACTACTACATCGGTTTTCTCCAATTTGGGCTTCTCCGAGGAAGGGAAATCCAGCAACTTTGACTTAAAGCCACATATAAAAGCGAATATGGTTTCTGCAGATCTAAATGGCCATAGAAGTGAACAATCTGTCCAAGTCCAGGTTCATGGAGTGAGTTCTCCGGCTGAGTTGAATGCCGATGAAATTAATCAGAGAATCCTTGAAAATACTGAAGTTCAACCCACATCGTTCGATCATAAAGGAACTGGGGATTCAATTGTTGTCGATAAGTCATCTGACGATGGATACAACTGGAGAAAATATGGACAGAAACATGTTAAAGGGAGTGAATTTCCTCGTAGCTATTACAAATGTACTCATCCTAACTGTGAAGTGAAAAAGTTGTTTGAACGCTCTCTCAATGGACAAATAACTGAGATTATCTACAAGGGTACCCATGATCATCCCAAACCTCAGCCAAGTCGACGATATATGTCTGCTAACGTAATGTCCATGCAAGAAGGAAGATTTGATAAGCCCGCATCCTTAACAGAACAAGATGCTAACAGGTATGGTCATATTTCACATTCTGCCGAGCCAAATGATTCTTCCGAGCAATCTCTTGTTGTAGCTAATGATGACGGTATCGAAGGCTCCGGTTCTTTCCCAAACAGAAACCTTGATGAAGCCAACGATGATGATCCTTTCTCCAAGCGGAGGAGAATGGAAGCTGGTGGATTTGACGTCACTCCAGTTATTAAACCTGTAAGAGAACCACGTGTAGTTGTTCAAACTTTGAGTGAGGTTGATATACTCGATGATGGCTACCGCTGGCGCAAATATGGGCAGAAAGTAGTGAGAGGAAATCCGAATCCAAGGAGTTATTACAAGTGCACAAATTTGGGATGCCATGTGAGAAAACACGTGGAAAGAGCATCCCATGATTTTAAGGCTGTGATAACCACATATGAAGGGAAACACAACCATGATGTTCCGGCTGCAAAATCTAGTAGCCACGACACTGCTGGTCCGGCCTTGATGGGAGGAGGACCATCCAAGTTCAGATCAGAAGAAGCTGATGCTATTAGCCTCGATCTTGTGGTCCGATCAAATGACTACGGCCAAACGGCGCGATACGAGCCTTCCCATTGTCAACCTCTGAGCAGCACCTCCAATTTTCGGGTAGTTCAAGCAAAGCCTGTCTCTATGCATTTTGGTGTTATAAATGGTGGCATAAATCAATATGGATCGAGAGAAAATGAGGGTACTCCGTTGTTGAACCATTCGGCGTACTCTTATCCTCAGAATATCGAAAGAATATTAACTGGTCCTTGA | 1635 | 44.89 | MGSTVAGSEQNRITDGDVPGDPNGTEFPDCVEARTTLTGGARYKLMTPAKLPISRATCITIPPGISPSSFLESPVLLTNMKVEPSPTTGSFIKSHMVHGYSSSGTYPTTTSVFSNLGFSEEGKSSNFDLKPHIKANMVSADLNGHRSEQSVQVQVHGVSSPAELNADEINQRILENTEVQPTSFDHKGTGDSIVVDKSSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSLNGQITEIIYKGTHDHPKPQPSRRYMSANVMSMQEGRFDKPASLTEQDANRYGHISHSAEPNDSSEQSLVVANDDGIEGSGSFPNRNLDEANDDDPFSKRRRMEAGGFDVTPVIKPVREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNLGCHVRKHVERASHDFKAVITTYEGKHNHDVPAAKSSSHDTAGPALMGGGPSKFRSEEADAISLDLVVRSNDYGQTARYEPSHCQPLSSTSNFRVVQAKPVSMHFGVINGGINQYGSRENEGTPLLNHSAYSYPQNIERILTGP | 544 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 27637758 | 27641037 | - | Bpe012670.1 | Bpe03g00760 | 101265 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe03g00760 | 544 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 33 | 155 | IPR044810 | GO:0003700 | |
Bpe03g00760 | 544 | PANTHER | WRKY TRANSCRIPTION FACTOR 20 ISOFORM X1-RELATED | 33 | 155 | - | - | |
Bpe03g00760 | 544 | SUPERFAMILY | WRKY DNA-binding domain | 198 | 258 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00760 | 544 | ProSiteProfiles | WRKY domain profile. | 367 | 432 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00760 | 544 | SUPERFAMILY | WRKY DNA-binding domain | 364 | 432 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00760 | 544 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 159 | 518 | IPR044810 | GO:0003700 | |
Bpe03g00760 | 544 | SMART | WRKY_cls | 372 | 431 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00760 | 544 | SMART | WRKY_cls | 199 | 257 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00760 | 544 | MobiDBLite | consensus disorder prediction | 313 | 340 | - | - | |
Bpe03g00760 | 544 | Gene3D | WRKY domain | 357 | 433 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00760 | 544 | Gene3D | WRKY domain | 191 | 259 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00760 | 544 | Pfam | WRKY DNA -binding domain | 200 | 256 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00760 | 544 | Pfam | WRKY DNA -binding domain | 373 | 429 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00760 | 544 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Bpe03g00760 | 544 | ProSiteProfiles | WRKY domain profile. | 200 | 258 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bpe03g00760 | 544 | PANTHER | WRKY TRANSCRIPTION FACTOR 20 ISOFORM X1-RELATED | 159 | 518 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe03g00760 | Bpe09g00135 | CCT | |
Bpe03g00760 | Bpe09g00135 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00760 | Bpe-Chr3:27637758 | Bpe09g00095 | Bpe-Chr9:657603 | 2.11E-90 | dispersed | |
Bpe08g00052 | Bpe-Chr8:278046 | Bpe03g00760 | Bpe-Chr3:27637758 | 1.92E-98 | transposed | |
Bpe03g00760 | Bpe-Chr3:27637758 | Bpe09g00135 | Bpe-Chr9:910747 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
21120 | PF03106 | WRKY | 2.20E-23 | CL0274 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe03g00760 | - | - | qsu:112006109 | 642.499 |