Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00760 ATGGGCTCTACTGTTGCTGGGTCCGAGCAGAATCGAATCACCGATGGAGATGTTCCCGGCGATCCGAATGGGACTGAGTTTCCGGATTGCGTAGAAGCTCGCACTACTCTTACAGGCGGCGCTAGGTACAAGCTGATGACTCCGGCGAAGCTTCCGATCTCTAGGGCTACTTGCATTACGATCCCACCGGGGATCAGCCCTTCTTCATTTTTGGAGTCTCCCGTTCTGCTCACTAACATGAAGGTTGAGCCTTCTCCTACCACTGGCTCCTTTATAAAGTCTCATATGGTTCATGGCTATTCCAGTTCAGGAACATATCCTACTACTACATCGGTTTTCTCCAATTTGGGCTTCTCCGAGGAAGGGAAATCCAGCAACTTTGACTTAAAGCCACATATAAAAGCGAATATGGTTTCTGCAGATCTAAATGGCCATAGAAGTGAACAATCTGTCCAAGTCCAGGTTCATGGAGTGAGTTCTCCGGCTGAGTTGAATGCCGATGAAATTAATCAGAGAATCCTTGAAAATACTGAAGTTCAACCCACATCGTTCGATCATAAAGGAACTGGGGATTCAATTGTTGTCGATAAGTCATCTGACGATGGATACAACTGGAGAAAATATGGACAGAAACATGTTAAAGGGAGTGAATTTCCTCGTAGCTATTACAAATGTACTCATCCTAACTGTGAAGTGAAAAAGTTGTTTGAACGCTCTCTCAATGGACAAATAACTGAGATTATCTACAAGGGTACCCATGATCATCCCAAACCTCAGCCAAGTCGACGATATATGTCTGCTAACGTAATGTCCATGCAAGAAGGAAGATTTGATAAGCCCGCATCCTTAACAGAACAAGATGCTAACAGGTATGGTCATATTTCACATTCTGCCGAGCCAAATGATTCTTCCGAGCAATCTCTTGTTGTAGCTAATGATGACGGTATCGAAGGCTCCGGTTCTTTCCCAAACAGAAACCTTGATGAAGCCAACGATGATGATCCTTTCTCCAAGCGGAGGAGAATGGAAGCTGGTGGATTTGACGTCACTCCAGTTATTAAACCTGTAAGAGAACCACGTGTAGTTGTTCAAACTTTGAGTGAGGTTGATATACTCGATGATGGCTACCGCTGGCGCAAATATGGGCAGAAAGTAGTGAGAGGAAATCCGAATCCAAGGAGTTATTACAAGTGCACAAATTTGGGATGCCATGTGAGAAAACACGTGGAAAGAGCATCCCATGATTTTAAGGCTGTGATAACCACATATGAAGGGAAACACAACCATGATGTTCCGGCTGCAAAATCTAGTAGCCACGACACTGCTGGTCCGGCCTTGATGGGAGGAGGACCATCCAAGTTCAGATCAGAAGAAGCTGATGCTATTAGCCTCGATCTTGTGGTCCGATCAAATGACTACGGCCAAACGGCGCGATACGAGCCTTCCCATTGTCAACCTCTGAGCAGCACCTCCAATTTTCGGGTAGTTCAAGCAAAGCCTGTCTCTATGCATTTTGGTGTTATAAATGGTGGCATAAATCAATATGGATCGAGAGAAAATGAGGGTACTCCGTTGTTGAACCATTCGGCGTACTCTTATCCTCAGAATATCGAAAGAATATTAACTGGTCCTTGA 1635 44.89 MGSTVAGSEQNRITDGDVPGDPNGTEFPDCVEARTTLTGGARYKLMTPAKLPISRATCITIPPGISPSSFLESPVLLTNMKVEPSPTTGSFIKSHMVHGYSSSGTYPTTTSVFSNLGFSEEGKSSNFDLKPHIKANMVSADLNGHRSEQSVQVQVHGVSSPAELNADEINQRILENTEVQPTSFDHKGTGDSIVVDKSSDDGYNWRKYGQKHVKGSEFPRSYYKCTHPNCEVKKLFERSLNGQITEIIYKGTHDHPKPQPSRRYMSANVMSMQEGRFDKPASLTEQDANRYGHISHSAEPNDSSEQSLVVANDDGIEGSGSFPNRNLDEANDDDPFSKRRRMEAGGFDVTPVIKPVREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNLGCHVRKHVERASHDFKAVITTYEGKHNHDVPAAKSSSHDTAGPALMGGGPSKFRSEEADAISLDLVVRSNDYGQTARYEPSHCQPLSSTSNFRVVQAKPVSMHFGVINGGINQYGSRENEGTPLLNHSAYSYPQNIERILTGP 544
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 27637758 27641037 - Bpe012670.1 Bpe03g00760 101265
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00760 544 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 33 155 IPR044810 GO:0003700
Bpe03g00760 544 PANTHER WRKY TRANSCRIPTION FACTOR 20 ISOFORM X1-RELATED 33 155 - -
Bpe03g00760 544 SUPERFAMILY WRKY DNA-binding domain 198 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00760 544 ProSiteProfiles WRKY domain profile. 367 432 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00760 544 SUPERFAMILY WRKY DNA-binding domain 364 432 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00760 544 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 159 518 IPR044810 GO:0003700
Bpe03g00760 544 SMART WRKY_cls 372 431 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00760 544 SMART WRKY_cls 199 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00760 544 MobiDBLite consensus disorder prediction 313 340 - -
Bpe03g00760 544 Gene3D WRKY domain 357 433 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00760 544 Gene3D WRKY domain 191 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bpe03g00760 544 Pfam WRKY DNA -binding domain 200 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00760 544 Pfam WRKY DNA -binding domain 373 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00760 544 MobiDBLite consensus disorder prediction 1 27 - -
Bpe03g00760 544 ProSiteProfiles WRKY domain profile. 200 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bpe03g00760 544 PANTHER WRKY TRANSCRIPTION FACTOR 20 ISOFORM X1-RELATED 159 518 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bpe03g00760 Bpe09g00135 CCT
Bpe03g00760 Bpe09g00135 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00760 Bpe-Chr3:27637758 Bpe09g00095 Bpe-Chr9:657603 2.11E-90 dispersed
Bpe08g00052 Bpe-Chr8:278046 Bpe03g00760 Bpe-Chr3:27637758 1.92E-98 transposed
Bpe03g00760 Bpe-Chr3:27637758 Bpe09g00135 Bpe-Chr9:910747 0 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21120 PF03106 WRKY 2.20E-23 CL0274 Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00760 - - qsu:112006109 642.499