Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00762 ATCATGAGGACGAACACTACTGAGGCGACGGACAATCGGTTTTTAGGAAGCATATCAGCTTCATCGATCCGTAATCTCCTACCTAAATCAATGTCCACTAAGAGGAAACTCAATTCAAGCTTTTCAGTTCTCAAACCTATCTCTGAAAACACTCCACCTGTCGATCCAAACATTCAGATCAACAATGATGATGCCTCAACTTTGGTTTCAAAACGATTCCCCCCAAAAATGTTGATTTCTCAGCAGGATCCAGCCACAATAACTTCGCCCCGTAAACTATCTGTTCCTCCGGATACACAATTAAAGGTTGTTGTGAGAATCAGATCTCCAAATAATGGGAAGAGGGAGGAAGATCTGAAAGTGAGAAAGTTCTCTTCTGATACTTTATTGGTTGGGGAACGAGAATTCGTGTTTGACCAAGTTTTCGACTGGAAATCGAAACAGGAAGATATTTTCCAGCAGGTGGGCGTTCCATTGGTTAAAAATGCATTGGCCGGTTACAACTCGTCGATCTTGTCTTACGGGCAGACTGGAACTGGCAAGACATACACAATGTGGGGTCCGCCTAACGCCATGGTTGAGGGTATATCAGCGGCTAGTGACCAAGGGATTGTTCCTCGCATTTTCAAAATGCTATTTTTGGAGATTCAGAAAGAACATGAAAACTCTGAAACAAAACAGATAAATTATCAGTGTCGATGTTCTTTTCTCGAGGTTTACAATGAGGAAATTATTGATCTACTTGATCCAACTCAGAAGAACCTTGAGGATGATGCCAAAAGTGGATCGTCCTTTGAGAACTTATCTGAAGAATATTTGACAAGCTATGATGATGTGATACAAGTTCTTATCAAGGGACTTTCAAGTAGAAAAGCAGGGGCAACCAGAGTAAATTCTAAGAGTTCAAGGTCTCATATTGTATTTAATTTCATCATCGAATCATGGCGCAAGGGCAATTCTTCAAGTTTTGGTAGCTCAAAAACAAGCCGAATCAGCTTCATTGATCTTGCAGGTCTGGATAGAAACCTATATGATGATGCGGATAGACAGTGCACGAGGGAAGCCAAGAATTTGAGAAAGTCTCTATCACGACTCGGGCACTTGGTGAACTTACTTTCAAATGAAGCTCATCCTGGTAAAGCTGAAGATGTTTTGTATACAAATTCTTGTTTGACGCATCTACTGCGAGACTCACTTGGTGGCAATGCTAAGCTCACAGTTATCTGCGTCATTTCTCAAGATAACAACCACATTGTCGAAACACTGAAGACTCTAAGATTTGGACAGCAATTAAAATGCGTAAAGAATAAACCTGTAATAAATGAAATAACAGAAAATGGTGTGAATGATCTCAGTGATCAAATTCATCAATTGAAGGAAGAACTTATAAGAGACAAGTCACCTGAATGCAGCAGTTCAATGGCAAGTGTAAATGGATATTTTCAAGGCCGAAATGTAGGAGAAAGCTCGAATCAGTTAACACTTGGCCTTAACCGCTCACTTATTCTTCCAAAGATGGACAATGAGTCTGATAAATATGTTAATTTGGATGAGCAAGACATTAAGCAATTACGTCAACAGCTAGATAAGTTGAATAGTTCAAGTGAATCAATTGAGACAAGTCGACCTGCCAGAAGAGATTCCCTTAACTTTTCATCAGCTGGAGAAAGTTTTGAAACGGACTCAATGAGTGATGATGATGTAAATAGTCCAGAGGATGAAACTGAAGCTGTAGATATGAATTTAGACAAACCTCAGAATGACAAAATTGAGTCATTACATCGCGTCCCTATCCATCTCACCTCAAAGGCTATTGAGACTATGATCAGAAGGAGCCTTTCAATCAACTCAAGCCGTCAGTCCCCTATTCTGGAAGACCCCCCATTATCAGAATCTCCAAAAATTGGAAAATCTCAGAGGAAGAGCATGGCTATATCTTCGAGTTCGTCACTTTGTAACGACACTAAGTCAGAGAATTCCAAGTTCAAAAACAATGAATCAACGGAGTTGCCATGTGAGAGTGAATGTGAATCCACATTGCAGAGAAGTAAGGTACTTCAAGGTCCAACTGAATCATTGGCTGCTAGTCTACAAAGAGGCTTGAATGTCATTGACTATCACCAGAGAAATTCGGCATCGATCAAATCTTCAGTGTCCTTCTCCTTTGAGCATCTAGCACTGAAAACTATCCCAGCAGCCCCAAAAGCAGACCCATTGACTTTTAAAGAAGTGAACAAGGGACCATCCTCTCATCTTTGTGCATCTTGCCAACAAAGACTACACAGAAATGAAATAAATGACGGTCACAATAACTCGAAACTACCTTTGGCGGTGGTTAATGAAACTGCTGATTCCATCCTACTCAATCACTTGAATGAGCTTCAAAGGTGCAATCTTGTAGAGTTCCATCAAAATGGATTCTCAAATTTGAATGAGAAGGAAGAACTTTCAAAGGAATTTCAAAGCTTGAAGGCAAAGCTTCAATCATTTGCAGCTTGCCCGTCTGGTATGTCCGTTCAAAAGTCCTCAGACAAATTAAGAACCTCATTGTTGGCACGGTCCATTCAGCTAAGAAAAGGTGGACTGGATTTCAAACAAATCGGCGAGGAGGAACTGGAGAAAGAAAGACAGAGATGGATGGAAATGGAGAGCGAATGGATATCTTTAACCGACGAATTGAGAATCGATCTTGAAGGGAGTCGACGACATGCGGAGAAGGTGGAGATGGAGTTGAGGTTGGAAAAAATGTGCAAAGAGGAGTTGGATGATGCCATTGAGAGAGCTGTTCTTGGCCACGCCAGAATTATCGAGCAGTACTCCGAGTTACAAGAAAACTACAATGAATTGGTCGGAAAGCATAGGGTTGTAATGGAGGGTATATCAGAAATTAAGCGAGCAGCAGAAAAGGCGGGATCTAAAGGTCACGGATCTCAGTTTGCTAAATCCCTTACAGCAGAGCTTTCGGCAGCAAGAAGAGAGAGGGAGAGGGAGAGAGAATTCTTGAAAAAGGAGAACACGAGGCTGAGAATTCAACTCAGAGACACCGCAGAAGCCGTTCAGGCCGCCGGAGAACTCCTTGCAAGGCTAAGAGAAGCAGAGCAATCAGCTTCAATTGCAGAGGAAAACTCTACGAGGGCCGAGCACGAAAACGAGAAGTTGAAGAAGCAAATGGAGAAACTGAAAGAGAAACACAAGGCGGAGATGGAGACGATGAAACAGTATCTTGCAGATAGCAGATTGCCTTCATCTGCATTGAAGCCACTGTACAGAGAAGAATCAGAGATAGTAAGTGAAGCAGTGGATGAAGATCATCAGGCGTGGAGAGCAGAGTTTGGAGCTATATATCAAGCTCATTACTGA 3360 41.76 IMRTNTTEATDNRFLGSISASSIRNLLPKSMSTKRKLNSSFSVLKPISENTPPVDPNIQINNDDASTLVSKRFPPKMLISQQDPATITSPRKLSVPPDTQLKVVVRIRSPNNGKREEDLKVRKFSSDTLLVGEREFVFDQVFDWKSKQEDIFQQVGVPLVKNALAGYNSSILSYGQTGTGKTYTMWGPPNAMVEGISAASDQGIVPRIFKMLFLEIQKEHENSETKQINYQCRCSFLEVYNEEIIDLLDPTQKNLEDDAKSGSSFENLSEEYLTSYDDVIQVLIKGLSSRKAGATRVNSKSSRSHIVFNFIIESWRKGNSSSFGSSKTSRISFIDLAGLDRNLYDDADRQCTREAKNLRKSLSRLGHLVNLLSNEAHPGKAEDVLYTNSCLTHLLRDSLGGNAKLTVICVISQDNNHIVETLKTLRFGQQLKCVKNKPVINEITENGVNDLSDQIHQLKEELIRDKSPECSSSMASVNGYFQGRNVGESSNQLTLGLNRSLILPKMDNESDKYVNLDEQDIKQLRQQLDKLNSSSESIETSRPARRDSLNFSSAGESFETDSMSDDDVNSPEDETEAVDMNLDKPQNDKIESLHRVPIHLTSKAIETMIRRSLSINSSRQSPILEDPPLSESPKIGKSQRKSMAISSSSSLCNDTKSENSKFKNNESTELPCESECESTLQRSKVLQGPTESLAASLQRGLNVIDYHQRNSASIKSSVSFSFEHLALKTIPAAPKADPLTFKEVNKGPSSHLCASCQQRLHRNEINDGHNNSKLPLAVVNETADSILLNHLNELQRCNLVEFHQNGFSNLNEKEELSKEFQSLKAKLQSFAACPSGMSVQKSSDKLRTSLLARSIQLRKGGLDFKQIGEEELEKERQRWMEMESEWISLTDELRIDLEGSRRHAEKVEMELRLEKMCKEELDDAIERAVLGHARIIEQYSELQENYNELVGKHRVVMEGISEIKRAAEKAGSKGHGSQFAKSLTAELSAARREREREREFLKKENTRLRIQLRDTAEAVQAAGELLARLREAEQSASIAEENSTRAEHENEKLKKQMEKLKEKHKAEMETMKQYLADSRLPSSALKPLYREESEIVSEAVDEDHQAWRAEFGAIYQAHY 1119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27651940 27667092 + Bpe012672.2 Bpe03g00762 101267

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00762 1119 MobiDBLite consensus disorder prediction 529 559 - -
Bpe03g00762 1119 MobiDBLite consensus disorder prediction 618 670 - -
Bpe03g00762 1119 Coils Coil 984 1018 - -
Bpe03g00762 1119 MobiDBLite consensus disorder prediction 560 576 - -
Bpe03g00762 1119 PANTHER CENTROMERE PROTEIN E 795 1119 - -
Bpe03g00762 1119 MobiDBLite consensus disorder prediction 635 670 - -
Bpe03g00762 1119 Coils Coil 441 461 - -
Bpe03g00762 1119 Coils Coil 932 952 - -
Bpe03g00762 1119 SMART kinesin_4 98 442 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe03g00762 1119 PANTHER KINESIN-LIKE PROTEIN KIN-12F 795 1119 - -
Bpe03g00762 1119 PANTHER KINESIN-LIKE PROTEIN KIN-12F 78 774 - -
Bpe03g00762 1119 Coils Coil 1022 1077 - -
Bpe03g00762 1119 PRINTS Kinesin heavy chain signature 166 187 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe03g00762 1119 PRINTS Kinesin heavy chain signature 295 312 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe03g00762 1119 PRINTS Kinesin heavy chain signature 384 405 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe03g00762 1119 PRINTS Kinesin heavy chain signature 330 348 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe03g00762 1119 Coils Coil 514 541 - -
Bpe03g00762 1119 ProSiteProfiles Kinesin motor domain profile. 100 434 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe03g00762 1119 Gene3D Kinesin motor domain 98 474 IPR036961 -
Bpe03g00762 1119 PANTHER CENTROMERE PROTEIN E 78 774 - -
Bpe03g00762 1119 Pfam Kinesin motor domain 126 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bpe03g00762 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 101 464 IPR027417 -
Bpe03g00762 1119 MobiDBLite consensus disorder prediction 529 576 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00762 K10400 KIF15; kinesin family member 15 - csv:101203593 1125.54
       

WGDs- Genes

Select Gene_1 Gene_2 Event_name
Bpe03g00762 Bpe09g00138 CCT
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00762 Bpe-Chr3:27651940 Bpe13g00757 Bpe-Chr13:14095909 2.07E-63 dispersed
Bpe03g00762 Bpe-Chr3:27651940 Bpe09g00138 Bpe-Chr9:935337 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi19g604 . . . . Bpe09g00138 . Bma10g00586 Bma13g01105 Cmo16g00977 . . . . . . . . . . . . . . . Cla10g00437 Cam10g0436 Cec10g0458 Cco10g0447 Clacu10g0444 Cmu10g1275 Cre10g0691 . . Cone14ag1198 Cone15ag1218 . Csa03g00446 . Cme06g02803 Blo07g00875 . Bda05g00688 . . Bpe03g00762 . . . . . . Cma16g00939 . Car16g00903 Cpe14g00763 . Bhi11g00510 . . . . . . . . . . . . . Lsi05g00529 . Chy06g01871 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0004807 2 1 1 2 2 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 1 0 4 1 1 40
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe03g00762 Bpe_Chr03 FPKM 10.711813 10.753244 17.249046 18.272326 7.794041 8.485988 8.529606 5.857674 6.325953 5.55056