Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00767 ATGGCATATTCTCAGGATTCATGGATAAAGGGATATAATGAAGCGTTAAAACTTGCTGATTGCATCAATGGAATGGTTTCCGATCAGGCTTCCCTTCCTGCATCTGGACCAGAAGCTCAGCGTTATGCCTCTGGTGTAAGAAGGAAGATATCAATATTGAGGACAAAAATCGACAGCTTAGAGTCCCTTCTGGGAAAGCTACCTAGAAAGCAACCTCTTTCAGAAAAGGAAATGAATCAACGCAAAGACTCACTCTTGAATTTGCGAACAAAAGTGAAACAGATGACTTCAACGTTAAACACAATGAATTTTGCCAACCGTGACAGCTTGCTTGGCCAAGAGATGAAGGAAGCCAATGCAACAAATGGATTGGACAACCCAGGGCTAATTGGCCTTCAGCGACAAATTATGAAGGCAGGGCAAGATGAAGGCCTTGAGAAGCTCCAGGAGACTGTAATTAGTACAAAACACATTGCATTGGCCGTAAATGAAGAACTCAACCTACATTCTAGGCTAATTGATGATTTGGATCAACATGTGGACGCCACTGATTCCAGACTAATGTTGGCGCAAAAGAAGCTGGCAATTTTGAATAAGCGCATAAAGAGAGGCTGCTTGTGCAAGTGCATGCTATTATCTATCGTCGGGATCATTGCTTTGGTGGTTGCCATGTGGTTACTCATCAAATACTTGTAA 696 42.53 MAYSQDSWIKGYNEALKLADCINGMVSDQASLPASGPEAQRYASGVRRKISILRTKIDSLESLLGKLPRKQPLSEKEMNQRKDSLLNLRTKVKQMTSTLNTMNFANRDSLLGQEMKEANATNGLDNPGLIGLQRQIMKAGQDEGLEKLQETVISTKHIALAVNEELNLHSRLIDDLDQHVDATDSRLMLAQKKLAILNKRIKRGCLCKCMLLSIVGIIALVVAMWLLIKYL 231
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27690393 27691924 + Bpe012677.1 Bpe03g00767 101272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00767 231 Pfam SNARE domain 172 222 IPR000727 -
Bpe03g00767 231 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 4 225 - -
Bpe03g00767 231 CDD SNARE_Qc 141 195 - -
Bpe03g00767 231 Gene3D - 139 199 - -
Bpe03g00767 231 PANTHER SYNTAXIN 4 225 IPR045242 -
Bpe03g00767 231 SUPERFAMILY SNARE fusion complex 132 196 - -
Bpe03g00767 231 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 135 197 IPR000727 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00767 Bpe08g01109 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00767 Bpe-Chr3:27690393 Bpe08g01119 Bpe-Chr8:13172770 1.46E-06 dispersed
Bpe03g00767 Bpe-Chr3:27690393 Bpe08g01109 Bpe-Chr8:13125614 2.57E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00767 K08503 - cit:102608030 328.561