Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00777 ATGAGGAAAGGAAGAGGATCGGCCGTTGCTCGGCCGGTGGCTTCTCCACTCGCTGTAGCGGGAGAATCGGCTGTGCCTCTTGGAAAATCGGTGGCCGCGGGATCGATTTCGAGGAATATTCTGGGGAAAGAGCCCAGATACAGAGGTGTGAGGAAAAGGCCGTGGGGGAGATTCGCCGCTGAGATCAGAGACCCCTGGAAAAAGACTAGAGTGTGGCTTGGGACTTTCGATTCGGCCGAGGATGCGGCCCGTGCCTACGATGCTGCCGCTCGGACGCTCCGTGGTCCGAAGGCGAAAACTAATTTTTCTCTTTCGAATCCTAATTTTCTTGATTTTCCTTATCACCATAACGCGATCGTTCCGAATAACGTTCCTGGCCTCGATCCGTTCATTGATCGTCGGTTTTACGGTGGAAATGGCTTCCAAGATCACCAGATTAATCCGCATAGACCGACCTCTAGCAGTTTGAGCTCCACCGTTGAGTCTTTCAGTGGGCCTAGACCTCGATCGGCGACCTTGACAGCTCCAACGACAGCTTCTGCCTCAGCCTTGCGGCGGCACCCTCGTACACCGCCTGTGTCGCCGGAGGACTGCCATAGTGACTGCGACTCGTCGTCATCAGTGATTGACGACGGGGATATCACCTCATCGTCCATGTTCCGAAAACCGATTCAAATCGACCTCAATTTCCCTCCTCTCGAAGACGGAGACTTTCCCGGTGACGATCTCCAATGTACTGCTTTATGCCTTTGA 753 54.05 MRKGRGSAVARPVASPLAVAGESAVPLGKSVAAGSISRNILGKEPRYRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARTLRGPKAKTNFSLSNPNFLDFPYHHNAIVPNNVPGLDPFIDRRFYGGNGFQDHQINPHRPTSSSLSSTVESFSGPRPRSATLTAPTTASASALRRHPRTPPVSPEDCHSDCDSSSSVIDDGDITSSSMFRKPIQIDLNFPPLEDGDFPGDDLQCTALCL 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27747543 27748295 - Bpe012687.1 Bpe03g00777 101282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00777 250 Pfam AP2 domain 45 95 IPR001471 GO:0003700|GO:0006355
Bpe03g00777 250 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Bpe03g00777 250 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Bpe03g00777 250 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 31 230 - -
Bpe03g00777 250 Gene3D AP2/ERF domain 46 105 IPR036955 GO:0003700|GO:0006355
Bpe03g00777 250 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Bpe03g00777 250 MobiDBLite consensus disorder prediction 145 184 - -
Bpe03g00777 250 MobiDBLite consensus disorder prediction 199 216 - -
Bpe03g00777 250 CDD AP2 45 102 IPR001471 GO:0003700|GO:0006355
Bpe03g00777 250 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 3-RELATED 31 230 - -
Bpe03g00777 250 MobiDBLite consensus disorder prediction 141 216 - -
Bpe03g00777 250 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Bpe03g00777 250 SUPERFAMILY DNA-binding domain 46 105 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00777 Bpe09g00157 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00777 Bpe-Chr3:27747543 Bpe14g00619 Bpe-Chr14:5122835 2.08E-42 dispersed
Bpe03g00777 Bpe-Chr3:27747543 Bpe09g00157 Bpe-Chr9:1059463 1.74E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21122 PF00847 AP2 9.30E-15 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00777 K09286 - pvy:116145234 251.521