Cucurbitales platform

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bpe03g00797	AAGATGAACTGCTTTCCATGCTGTAAATCACAAGAAAGATTCAACAGGAAGTCATTGAAAAAGAGCATTAAGGAGTATCATGATGCAAAAACTTTAGCCTCATTTGCTAACATCTCCTTCAAATCTGATGGAAGCAGAAAAAGATACATAACTGAAGAGATAAAGAAGATAGGTAAAGGAAACATATCTGCTCAGATATTCTCTTTTCGGGAGCTCTGTGTTGCAACAGACAATTTCAACCCAGAGAATTTGATAGGCGAAGGTGGCTTTGGTAGAGTTTACAAAGGCCAAATTGGAGGAAGTAAACAGGCCGTAGCTGTTAAGCAACTTGACAGAAATGGGTTTCAGGGAAACAGAGAGTTCCTCGTAGAGGTTTTGATGCTGAGTCTTCTTCACCATCCTAATCTTGTGAATTTGGTCGGATATTGCACCGACGGTGAGCAGAGGATTCTTGTTTACGAGTATATGTCTAATGGATCGTTGGAAGATCACCTTCTTGATTTAGCTCCAGACAGAAAGCCTCTGGATTGGAAAACTAGAATGAAAATAGCAGAAGGAGCAGCAAAAGGACTTGAATACTTACACGAAACAGCAAATCCTCCAGTGATATACCGTGATTTCAAAGCATCAAATATACTGTTGGATGAAGAATTCAATCCGAAACTCTCAGATTTTGGCCTTGCAAAATTAGGTCCAACAGGCGATAAAACTCATGTATCGACTAGAGTTATGGGAACCTATGGTTACTGCGCTCCGGAATACGCTCTAACAGGTCAATTAACCTCAAAATCCGATGTTTACAGCTTTGGGGTAGTGTTTCTGGAGATAATCACTGGAAGAAGAGTCATCGACAATGCTAGACCAAGCGAAGAACAAAACCTAGTCACTTGGGCCCAACCGCTGTTTAAAGACAGAAGGAAGTTTACTTTAATGGCAGATCCGTTGCTGGAGGGAAATTATCCAGTGAAGGGGCTTTACCAAGCCCTAGCAGTTGCAGCAATGTGCCTTCAAGAGGAAGCAAGCACTCGGCCATTGATTAGCGATGTGGTAACTGCTCTTGCGTATTTAGCTACAGAAAAGAACGAAGAGGACTAA	1095	41.64	KMNCFPCCKSQERFNRKSLKKSIKEYHDAKTLASFANISFKSDGSRKRYITEEIKKIGKGNISAQIFSFRELCVATDNFNPENLIGEGGFGRVYKGQIGGSKQAVAVKQLDRNGFQGNREFLVEVLMLSLLHHPNLVNLVGYCTDGEQRILVYEYMSNGSLEDHLLDLAPDRKPLDWKTRMKIAEGAAKGLEYLHETANPPVIYRDFKASNILLDEEFNPKLSDFGLAKLGPTGDKTHVSTRVMGTYGYCAPEYALTGQLTSKSDVYSFGVVFLEIITGRRVIDNARPSEEQNLVTWAQPLFKDRRKFTLMADPLLEGNYPVKGLYQALAVAAMCLQEEASTRPLISDVVTALAYLATEKNEED	364

Gff information

Chromosome	Start	End	Strand	Old_gene	Gene	Num
3	27918991	27921190	+	Bpe012709.1	Bpe03g00797	101302

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bpe03g00797	364	ProSitePatterns	Protein kinases ATP-binding region signature.	85	108	IPR017441	GO:0005524
	Bpe03g00797	364	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	202	214	IPR008271	GO:0004672\|GO:0006468
	Bpe03g00797	364	ProSiteProfiles	Protein kinase domain profile.	79	356	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bpe03g00797	364	PANTHER	OS07G0668900 PROTEIN	2	358	-	-
	Bpe03g00797	364	CDD	STKc_IRAK	85	353	-	-
	Bpe03g00797	364	PANTHER	RECEPTOR SERINE/THREONINE KINASE	2	358	-	-
	Bpe03g00797	364	Gene3D	Phosphorylase Kinase; domain 1	50	155	-	-
	Bpe03g00797	364	Pfam	Protein kinase domain	82	349	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bpe03g00797	364	SUPERFAMILY	Protein kinase-like (PK-like)	62	353	IPR011009	-
	Bpe03g00797	364	Gene3D	Transferase(Phosphotransferase) domain 1	156	364	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	Bpe03g00797	Bpe09g00183	CCT

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	Bpe03g00797	Bpe-Chr3:27918991	Bpe04g01126	Bpe-Chr4:9758205	0	dispersed
	Bpe12g00262	Bpe-Chr12:2483157	Bpe03g00797	Bpe-Chr3:27918991	6.03E-112	dispersed
	Bpe06g00684	Bpe-Chr6:17437770	Bpe03g00797	Bpe-Chr3:27918991	2.20E-79	transposed
	Bpe13g01451	Bpe-Chr13:19790872	Bpe03g00797	Bpe-Chr3:27918991	5.00E-89	transposed
	Bpe03g00797	Bpe-Chr3:27918991	Bpe09g00183	Bpe-Chr9:1270733	0	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	63249	PF00069	Pkinase	8.70E-46	CL0016	Bpe	PK

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bpe03g00797	-		-	qsu:111998873	645.966