Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00803 ATAGATCCGTTTGCTGATGCAAATGCTGAGGACTCTGGTGCTGGGGCAAAAGAGTATGTGCACATTCGAATTCAACAGCGGAATGGTAGGAAGAGTCTCACAACTGTGCAGGGACTGAAGAAAGAATTCAGCTACAACAAGATATTGAAGGACCTTAAGAAGGAGTTTTGCTGCAATGGTACAGTTGTTCAGGACCCAGAGCTAGGACAGGTTATTCAACTTCAAGGCGACCAACGGAAAAATGTGTCTACATTCCTTATCCAGGCTAATATTGTGAAAAAGGACAATATCAAGATTCATGGTTTC 306 42.81 IDPFADANAEDSGAGAKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLIQANIVKKDNIKIHGF 102
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 27968641 27969288 - Bpe025393 Bpe03g00803 101308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00803 102 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 2 102 - -
Bpe03g00803 102 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 2 102 - -
Bpe03g00803 102 PIRSF Transl_init_SUI1_Euk 1 102 IPR005874 GO:0003743
Bpe03g00803 102 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 2 102 IPR005874 GO:0003743
Bpe03g00803 102 Gene3D - 1 102 - -
Bpe03g00803 102 CDD eIF1_SUI1 18 101 IPR005874 GO:0003743
Bpe03g00803 102 Pfam Translation initiation factor SUI1 17 89 IPR001950 GO:0003743|GO:0006413
Bpe03g00803 102 SUPERFAMILY eIF1-like 4 102 IPR036877 GO:0003743|GO:0006413
Bpe03g00803 102 ProSiteProfiles Translation initiation factor SUI1 family profile. 20 90 IPR001950 GO:0003743|GO:0006413
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00803 Bpe08g01137 CCT
Bpe03g00803 Bpe09g00189 CCT
Bpe03g00803 Bpe08g01137 ECH
Bpe03g00803 Bpe09g00189 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00803 Bpe-Chr3:27968641 Bpe11g00551 Bpe-Chr11:4222231 7.48E-55 dispersed
Bpe12g00226 Bpe-Chr12:1898632 Bpe03g00803 Bpe-Chr3:27968641 4.75E-66 wgd
Bpe03g00803 Bpe-Chr3:27968641 Bpe08g01137 Bpe-Chr8:13247120 1.72E-69 wgd
Bpe03g00803 Bpe-Chr3:27968641 Bpe09g00189 Bpe-Chr9:1319288 1.03E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00803 K03113 - tcc:18593645 201.445