Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00818 ATGGCTTCCCAGCAAGAAATTTCTCATGCTTCACACAGTCACTATAACGAGCACGAAGGAACGGACGAAGAAGATGAAGAAGAAGTGGAGGAGGAAGAAGAAGAAAGTTATCAGAGTGGAGAAAGCAAAAAGAGAAATTGTTACAGAAATGGGTGGTCAATAGGAGGTGTTTTGGATCCAAGAGCCAAATGGGTTAAAGACTGGAATAGGGTTTTCCTCCTAGTCTGCGCCACAGGCCTCTTTGTGGACCCACTCTTTTTCTACGCCCTATCAATAAGCGACACCTTTATGTGTCTCTTCGTCGATGGCTGGTTTGCCATCACCGTGACGACTCTCAGGTGCATGACAGACGCCCTGCACGTGTGGAACATTTGGTTGCAACTGAAAATGGCGAAGAGGTTCTCGTTTGGTAATATCGGAGCCGTGGAAGAAGAAGAAAGCGGTGGAATTATGAGGGATTATGGAAGTCCTCGCTCCGTCGCTCTTCGTTACTTGAAGGCTAAAAAGGGTTTCTTCTTTGATCTCTTTGTTATTCTTCCGTTACCCCAGTTGGTATTATGGGTAGCAATTCCATGGCTGTTGAAAAGAGGATCAGTAACAATGGTGATGACAGTGTTTTTGATAATATTTCTGTTCCAATATCTTCCCAAAATCTATCATTCTGTCTGCCTCTTACGTCGCATGCAGAATCTCTCTGGCTACATTTTCGGAACTGTCTGGTGGGGTATTGCTCTAAATATGATAGCCTATTTTGTTGCTGCCCATGCAGCAGGAGCGTGTTGGTATCTGCTGGGAATTCAAAGGGCAGATAAGTGTCTGAAAGAGCAATGCAGAGAAGCAGAAGGGTCCTGTAATCCGAGAGTGTTGGCTTGTAAAGAAGCCATTTTTTATGGGGCAACGAGCATGGTGGAAGACAGGTCAGAGAGATTTGCATGGGCTGTGAACAAGAAAGCAAGGTCTATGTGCTTGGAAAGTGCAGAGAACTATAACTATGGAGCTTATAAATGGACTGTTCAGCTCGTCACCAATGATAGTCGCTTGGAGAAGATTCTTTTCCCAATCTTTTGGGGCTTGATGACTCTTAGTACATTTGGGAACTTGGAAAGCACGACAGAATGGCTAGAAATTGTCTTCAACATCATTGTATTAACCAGTGGGCTAATTTTAGTGACCATGTTGATCGGAAATATTAAGGTGTTTTTACATGCAACTACGTCCAAGAAACAAGCAATGCAGTTAAAGATGAGGAATGTAGAGTGGTGGATGAGGAAGAGGTACTTACCTCAAGGATTCCAGCAACGTGTTCGTAACTATGAGCGGCAAAGATGGGCCGCCATGCGTGGCGTTGACGAGTGTGAGATGATCAAAAACCTGCCGGAGGGACTCCGAAGAGACATCAAGTATCATTTGTGCTTGGATTTGGTCAGACAGGTGCCTTTATTCCAACACATGGATAATCTAGTTCTCGAAAACATTTGCGACCGAGTAAAGTCTCTCATTTTCACCAAGGGTGAAACGATAGCCAGAGAAGGAGACCCAGTTCAAAGAATGCTGTTTGTAGTAAGAGGCCATCTTCAAAGTAGCCAAGTTCTAAGAGACGGAGTCAAAAGCTGTTGTATGTTAGGCCCCGGAAATTTCAGTGGAGATGAGCTGCTCTCATGGTGTCTCCGAAGACCATTTATCGAAAGATTACCTCCGTCGTCCTCGACTCTCGTCACTCTCGAGACCACAGAGGCCTTCGGCTTGGAGGCCGAGGACGTAAAATACGTGACGCAACATTTTCGTTACACGTTCGTGAACGAAAAAGTCAAAAGAAGTGCAAGATATTACTCACCCGGATGGAGGACTTGGGCTGCAGTTGCAATTCAGCTAGCTTGGAGAAGATACAAGCATCGATTGACGCTTTCGTCGTTGTCGTTTATTCGCCCTCGTCGGCCGTTGTCTCGATCTTCGTCGTTAAGTGAAGACAGGCTCAGGCTCTACACTGCTTTGCTCACTTCACCAAAGCCTAATCAAGAAGATAATGATTTTTGA 2034 45.13 MASQQEISHASHSHYNEHEGTDEEDEEEVEEEEEESYQSGESKKRNCYRNGWSIGGVLDPRAKWVKDWNRVFLLVCATGLFVDPLFFYALSISDTFMCLFVDGWFAITVTTLRCMTDALHVWNIWLQLKMAKRFSFGNIGAVEEEESGGIMRDYGSPRSVALRYLKAKKGFFFDLFVILPLPQLVLWVAIPWLLKRGSVTMVMTVFLIIFLFQYLPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGIQRADKCLKEQCREAEGSCNPRVLACKEAIFYGATSMVEDRSERFAWAVNKKARSMCLESAENYNYGAYKWTVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTEWLEIVFNIIVLTSGLILVTMLIGNIKVFLHATTSKKQAMQLKMRNVEWWMRKRYLPQGFQQRVRNYERQRWAAMRGVDECEMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDNLVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLSSLSFIRPRRPLSRSSSLSEDRLRLYTALLTSPKPNQEDNDF 677
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28141727 28145637 - Bpe012729.1 Bpe03g00818 101323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00818 677 Gene3D Helix hairpin bin 405 471 - -
Bpe03g00818 677 MobiDBLite consensus disorder prediction 20 36 - -
Bpe03g00818 677 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 16 674 - -
Bpe03g00818 677 MobiDBLite consensus disorder prediction 1 42 - -
Bpe03g00818 677 SUPERFAMILY Voltage-gated potassium channels 61 401 - -
Bpe03g00818 677 SUPERFAMILY cAMP-binding domain-like 406 594 IPR018490 -
Bpe03g00818 677 Pfam Ion transport protein 68 397 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bpe03g00818 677 Coils Coil 15 35 - -
Bpe03g00818 677 Pfam Cyclic nucleotide-binding domain 501 588 IPR000595 -
Bpe03g00818 677 Gene3D Jelly Rolls 478 596 IPR014710 -
Bpe03g00818 677 ProSiteProfiles cAMP/cGMP binding motif profile. 480 590 IPR000595 -
Bpe03g00818 677 CDD CAP_ED 480 586 IPR000595 -
Bpe03g00818 677 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 16 674 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00818 Bpe-Chr3:28141727 Bpe11g01439 Bpe-Chr11:10686813 0 dispersed
Bpe03g00818 Bpe-Chr3:28141727 Bpe12g00381 Bpe-Chr12:9134036 1.69E-116 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00818 K05391 - zju:107430493 1088.94