Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00819 ATGATGTTATCCGCATCCCCCTCCATGGTAGTGCGGAGCTCGCTAGAGGAAATGCTGGATTCTTTGCGACAGAGAGATGAAAATGAGAAGCCTAAAGACTTGCCGCCCGCACTACCATCACGCCCTATTTCAATAGGTCGGCTTCCCCCTGCAAGACGATCTTTGCCGAGTAACTTCCGTGTTAGCAATGTCGGTGAATCACAGTGCTCTGTTTGTGTGTTCAATGAAAAGGAAGATTCAAATAGGAAAGAGAAAGATGTACGATATGACAGAGGTAGATTTGGATGCAAAAAAATGAGGAAAGATCAAAATGATGAGTCGCCTTATATGTGGAAATATGGATCCGATAAACTTGATCAAGCTAATTTTGATGGTGGTTCTGGTATGTCTTCTGCTTCACGGTTAAATGTGCGGGGGTCAGACTGGGATGACACCATTGATTATTACATTAAGAAGAGGCTTCATGTTTGGTGTCAACTTCCAAGTGGCCAGTGGGCTGCTGGAACAATTAAATCAGCATCAGGAGATGAAGTGTTTATCATGCTTTTCAACAAAGACGTTGTAAAAGTACCTGCGGAAAGCCTTTTACCTGCCAACCCTAGTATTCTAGATGAAGTCGATAACCTTGTACAGCTTAGTTTCCTAAATGAGCCTTCTGTACTTCACAATCTACGGAAGAGATACTCCCTCACTAAGATTTATAGTAAAGCAGGGCCTGTTTTGATTGCACTGAATCCCTTCAAAGATGTCAAAATTTATGGAAATGATTTTGTCGTAGCTTACAGTGAGAAGCTTACAGATAGTCCTCATGTGTTTTCTGTGGCAGAATGTGCTTATAGTAATATGAGGAGAGAAGAAGTCGATCAATCCATCATTTTAAGTGGGCAAAGTGGATCTGGAAAAACTGAGACCGCAAAAATTGCAATGCAATACTTGGTTGCAGTTGCTGGAGATAGTTATGGGATGGGTAACAGAATATTGCAATCAAATAGTATATTAGAAGCATTTGGGAATGCTAAAACATTTCATAATGACAATTCCAGTCGTTTTGGAAAGGTGATTCAAGTTCAATTTGGCTCCATGGGAAAGATATGTGGAGCTAAATTCCAAACCTGTAAGAATTTTTCTGAGATCATTGTCTGTTCTGAGCAGTCGAGGGTAGTTCAGTTTGCCAATGGAGAGAGATCATTCCACATCTTTTATCAACTTTGTGCTGGTGCTCCGTCCCTACTTCGAGAAAAACTAAACCTTAATATGGCTAGCGAGTACAAGTATCTTAATCAGAGTGAGTGCTTGAGAATTGACGGTGTGGATGACTCATGGAAGTTTCAAAATCTCCAGGAAGCCCTTGACATTATTCAAATTTGCAAGGAAGATAAAGAGCATATATACTCAATGCTTGCCGTGGTGTTATGGTTAGGAAACATATCATTTCGAGCGAATGATGGGGAAAATCATGTTGAGGTGGTTGCTGACGAAGCATTTACGAATGTGACCAAGCTTCTAGGCTGCAAATCTGAAGACCTTATGTTAGTTTTATCAAGACATAAAAGCCTAGCTGACGAAAATAGTATGGGAAGAAAGCTAACATTACAACAGGCAATCAATTCAAGAGATGCATTTGCCAGATTCATCTACGCAAGCTTGTTTGACTGGCTTGTGGAGCAAGTTAATATGTCACTGGAAGTGCAAAAGAAGCATTCTGGAAAATCCATTAGCATATTTGATATTTCTGGGTTTGAGTCATTTAAGAAAAATAGTTTTGAACAATTTTGCGTAAATTATGCAAACGAGAGACTGCAACAGCATTTCAACAGGCATCTATTAAAACTGGAGCAAGAGGACTGTGAACGGGATGGAATTGGTTGGAATAGAATTATGTTTAAAGACAACCAAGAGTGCTTGAATCTTATTGAGCAGAAACCTCTTGGACTACTAGCTTTACTGGATGAGGAATCAAATCTCCCCAAGGCTACCGATCTGACATTTGCCAACAAACTAAAGCATCACTTGAATGGAAATCTCTGCTTTAAAGGAGAAAGAGGAAGAGCTTTTGGAATTTTTCATAATGCTGGAGAGGTAATATATGATACAAATGGATTTTTGGAAAAGAACAAAGATTTGTTACCCTATGCGTGCATCGAACTCTTGTCATCAAGTAATTGCAAAGCACTAAAATCATTTGGATCCTCAGTGCCTAACCATTCTGAGATACCAACCATTGGTATGTGTCAGAGAGGTGTATTTGAGTTTTCAAAGCCAACCGTTGGTGCAAGTTTTAAGGAACAATTGTTCGAAGTATTCCATAGTTTGGAGAGTACTAGTCCTCACTTTATCCACTGCATAAAGCCAAATGTCAAACGGGTCCACGATTCATTTGAGGAGGAACTTGTTATACAACAGCTCAAGTGCTGTAATGCTTTTGAGGTCGTCCAGATATCGAAATATGGATATCCGACTAGATTGACACATCAAAAGTTTGCAGAAAGGTACGGTTTCTTATTGAAGGAGTCCAACACTTCTGACGATCCATTGAACAGATCGGTTGCTATCTTCCAACAATTTAATTTTCTCCCTGAAATGTATCAAGTTGGTTATACGAAATTGTTTTTCCAGACTGGGCAGATAGAGATATTAGAGGAAAAGAGACAACAGGTACTACATGGCATTCTAAGGGTGCAAAACTCCTTTCGTAGTCGTCAGGCTCGCAATTATTTTCGAGAACTCAAGAATGGAGCCACAATGTTACAATCATTTGTTCGCGGTGAAATAGCAAGAAGGAAAATTACAGTTGTAATAAAGTGGTGCACATCTACTGTTCCCGATAAAACTGATGAGTTGCAGGCTGTTATACACTTACAATCAGCAATCCGTGGTTTACTAGTACGGAAACGATATAAAATCGTGCATTACTTGAAGAAATTGTATCCAGAGATTCAAGAATCTAAACAAAAGTCAGGCAGGAAAAATTTTGAAGATAAAAGACAAAAGCAAGTTCAAGTTACTCCTTCTGTTTTGGCAGAGCTTCAAATACGAATTCTTAAAGCAGAAGCAAATTTGCAGACAAAGGAAGAGGAAGCGGCTAGACTGCAAGAGCAAGTACAACAATACGAGGCTAGGTGGTCAGAATATACAGCAAAGATGAAATCAATGGAGGAAATTTGGCGAAAGCAGATGTCATCTTTGCAAATGACTCTTGCTGGAGGACGAAGAAGCCTTGGTGCAGAATTTAATGCCAATCCACCTGGAAGAGTCGATGCCCCATCACCCCAATATTATGACTCTGAAGATACCATGTCGATGGGATCAAGAACTCCTGGTTGCAGCACGCCCCTCAAATTTTCAACTGCCATTTCCGAAACTGGAACAGGACGTGATACTAATGGAGCTGTGTGTGCAGTCGCGAAACTGGTAAAGGAATTTGAGCGAAAAAAACAGAGTTTTGACGATGATGTTAAAGCTCTAGTTGAAGCAAAATCAGGGCAATCGGGTTCAGTAATGAATCCTGAGAAAGAAATTAGTAATCTCAGACATAGATTCGACTCGTGGAAGAAAGAGTACAAAGTTAGGCTACGAGAGGCGAAAGCAAATATACGAAAGCTCGGGAATTCAGATGAAAGGAGTAGGAGAAAGTGGTGGGGAAAATTAAGCTCAAGAGCATCATAA 3666 40.07 MMLSASPSMVVRSSLEEMLDSLRQRDENEKPKDLPPALPSRPISIGRLPPARRSLPSNFRVSNVGESQCSVCVFNEKEDSNRKEKDVRYDRGRFGCKKMRKDQNDESPYMWKYGSDKLDQANFDGGSGMSSASRLNVRGSDWDDTIDYYIKKRLHVWCQLPSGQWAAGTIKSASGDEVFIMLFNKDVVKVPAESLLPANPSILDEVDNLVQLSFLNEPSVLHNLRKRYSLTKIYSKAGPVLIALNPFKDVKIYGNDFVVAYSEKLTDSPHVFSVAECAYSNMRREEVDQSIILSGQSGSGKTETAKIAMQYLVAVAGDSYGMGNRILQSNSILEAFGNAKTFHNDNSSRFGKVIQVQFGSMGKICGAKFQTCKNFSEIIVCSEQSRVVQFANGERSFHIFYQLCAGAPSLLREKLNLNMASEYKYLNQSECLRIDGVDDSWKFQNLQEALDIIQICKEDKEHIYSMLAVVLWLGNISFRANDGENHVEVVADEAFTNVTKLLGCKSEDLMLVLSRHKSLADENSMGRKLTLQQAINSRDAFARFIYASLFDWLVEQVNMSLEVQKKHSGKSISIFDISGFESFKKNSFEQFCVNYANERLQQHFNRHLLKLEQEDCERDGIGWNRIMFKDNQECLNLIEQKPLGLLALLDEESNLPKATDLTFANKLKHHLNGNLCFKGERGRAFGIFHNAGEVIYDTNGFLEKNKDLLPYACIELLSSSNCKALKSFGSSVPNHSEIPTIGMCQRGVFEFSKPTVGASFKEQLFEVFHSLESTSPHFIHCIKPNVKRVHDSFEEELVIQQLKCCNAFEVVQISKYGYPTRLTHQKFAERYGFLLKESNTSDDPLNRSVAIFQQFNFLPEMYQVGYTKLFFQTGQIEILEEKRQQVLHGILRVQNSFRSRQARNYFRELKNGATMLQSFVRGEIARRKITVVIKWCTSTVPDKTDELQAVIHLQSAIRGLLVRKRYKIVHYLKKLYPEIQESKQKSGRKNFEDKRQKQVQVTPSVLAELQIRILKAEANLQTKEEEAARLQEQVQQYEARWSEYTAKMKSMEEIWRKQMSSLQMTLAGGRRSLGAEFNANPPGRVDAPSPQYYDSEDTMSMGSRTPGCSTPLKFSTAISETGTGRDTNGAVCAVAKLVKEFERKKQSFDDDVKALVEAKSGQSGSVMNPEKEISNLRHRFDSWKKEYKVRLREAKANIRKLGNSDERSRRKWWGKLSSRAS 1221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28148861 28157872 - Bpe012730.1 Bpe03g00819 101324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00819 1221 Gene3D Myosin VI head, motor domain, U50 subdomain 456 752 - -
Bpe03g00819 1221 Gene3D - 581 774 - -
Bpe03g00819 1221 Pfam IQ calmodulin-binding motif 912 928 IPR000048 GO:0005515
Bpe03g00819 1221 Pfam IQ calmodulin-binding motif 948 967 IPR000048 GO:0005515
Bpe03g00819 1221 CDD MYSc_Myo8 218 871 IPR036022 -
Bpe03g00819 1221 PRINTS Myosin heavy chain signature 234 253 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe03g00819 1221 PRINTS Myosin heavy chain signature 571 599 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe03g00819 1221 PRINTS Myosin heavy chain signature 624 652 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe03g00819 1221 PRINTS Myosin heavy chain signature 288 313 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe03g00819 1221 PRINTS Myosin heavy chain signature 331 358 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe03g00819 1221 Coils Coil 1184 1204 - -
Bpe03g00819 1221 ProSiteProfiles IQ motif profile. 909 938 IPR000048 GO:0005515
Bpe03g00819 1221 Gene3D - 395 454 - -
Bpe03g00819 1221 SMART iq_5 908 930 IPR000048 GO:0005515
Bpe03g00819 1221 SMART iq_5 885 907 IPR000048 GO:0005515
Bpe03g00819 1221 SMART iq_5 945 967 IPR000048 GO:0005515
Bpe03g00819 1221 MobiDBLite consensus disorder prediction 1201 1221 - -
Bpe03g00819 1221 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 970 IPR027417 -
Bpe03g00819 1221 ProSiteProfiles IQ motif profile. 888 914 IPR000048 GO:0005515
Bpe03g00819 1221 Gene3D - 888 932 - -
Bpe03g00819 1221 Gene3D - 817 885 - -
Bpe03g00819 1221 ProSiteProfiles IQ motif profile. 946 974 IPR000048 GO:0005515
Bpe03g00819 1221 Coils Coil 1138 1158 - -
Bpe03g00819 1221 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 151 200 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bpe03g00819 1221 PANTHER MYOSIN 35 1219 - -
Bpe03g00819 1221 Coils Coil 1006 1047 - -
Bpe03g00819 1221 MobiDBLite consensus disorder prediction 18 34 - -
Bpe03g00819 1221 Gene3D Kinesin motor domain 207 813 IPR036961 -
Bpe03g00819 1221 SMART MYSc_2a 198 885 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe03g00819 1221 ProSiteProfiles Myosin motor domain profile. 204 884 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bpe03g00819 1221 PANTHER MYOSIN-2 ISOFORM X1 35 1219 - -
Bpe03g00819 1221 MobiDBLite consensus disorder prediction 1 54 - -
Bpe03g00819 1221 Pfam Myosin head (motor domain) 206 872 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00819 Bpe-Chr3:28148861 Bpe15g01399 Bpe-Chr15:21882194 0 dispersed
Bpe11g00503 Bpe-Chr11:3891843 Bpe03g00819 Bpe-Chr3:28148861 3.34E-88 wgd
Bpe03g00819 Bpe-Chr3:28148861 Bpe08g01157 Bpe-Chr8:13348779 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00819 K10357 - qsu:112007399 1463.36