Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00849 ATGAGTCCTGGAGGCTGGTTTCGGATAATAATTAAGCGACGGAAAGCTAAGAAAGACAAAACCTGTGGAGAAAAGGTAGATTTAACGACAGGAAAGTATAATGGTTCTAAAGATAGGAAGAATCACATTCAAATAGAATCAAGCATTTCCAATGGTGATTTGAGTCAAAATGCATTGAGTCCTAGAAGATCCCTCAAAGATCTCGCCGCAACACAGATTCAGGCTGCATTTCGAGCATTTATGGCAAGAAAAGTTTTTAAATTTTCCAAAGGGACAGAGAGATTTCACGGGATACTTCGAGCTGACATGTCAAGAAAGCAAGCATCAGATGCATTAAGATACATACATTCATGGAGCAGGATGCAGAATGAAGTTAGAACTCGTCGACTATGCATGGTCACAGACCATACAACTCAACGAAAGAAACTGGAAAACCAGTTAAAACTCGATGCTAAGCTTCATGAACTTGAGGTGGAGTGGTGTGGTGGGTCTGAAACAATGGAGGAAATTCTTTCTAGAATTCACTATAGAGAAGAAGCAGCAGTTAGACGAGAGAGAGCCATGGCTTATGCATTCTCTCATCAGTGGAGAGCAAACTCAATATTGCATGTGAGCCCAGCATGTTACAGCATAGACAAAGAAAACTGGGGATGGAGCTGGAAACAGAGGTGGATAGCTGCTAGGCCATGGGAGATCAAAGCTCATGCTCACCCCACCATTCCTAAGAAACTACAAACCAAAATCTCCCCTAAATCTCCTCTCTCCGATGGAAAACACTCTCAAACCCATTAA 792 42.05 MSPGGWFRIIIKRRKAKKDKTCGEKVDLTTGKYNGSKDRKNHIQIESSISNGDLSQNALSPRRSLKDLAATQIQAAFRAFMARKVFKFSKGTERFHGILRADMSRKQASDALRYIHSWSRMQNEVRTRRLCMVTDHTTQRKKLENQLKLDAKLHELEVEWCGGSETMEEILSRIHYREEAAVRRERAMAYAFSHQWRANSILHVSPACYSIDKENWGWSWKQRWIAARPWEIKAHAHPTIPKKLQTKISPKSPLSDGKHSQTH 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28308222 28309732 + Bpe012757.2 Bpe03g00849 101354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00849 263 PANTHER IQ-DOMAIN 5-RELATED 3 247 - -
Bpe03g00849 263 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 3 247 - -
Bpe03g00849 263 MobiDBLite consensus disorder prediction 245 263 - -
Bpe03g00849 263 MobiDBLite consensus disorder prediction 241 263 - -
Bpe03g00849 263 Pfam IQ calmodulin-binding motif 69 87 IPR000048 GO:0005515
Bpe03g00849 263 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00879 Bpe-Chr1:19093348 Bpe03g00849 Bpe-Chr3:28308222 3.46E-67 dispersed
Bpe03g00849 Bpe-Chr3:28308222 Bpe11g00883 Bpe-Chr11:6512334 1.16E-43 dispersed
Bpe03g00849 Bpe-Chr3:28308222 Bpe02g00495 Bpe-Chr2:3201970 1.09E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00849 - - qlo:115954652 279.256