Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00858 CTCATGAAAGCAAGCAGTAATTTGGGGCTTAATGGTTTTTTCACTTTAGCCCATTACAACTTGCCTCGTCTAGGGATGAAGAATGAAGGACTGCTAAATCTCCACTCATTCTCCACAACTTTTCCATTTTCTATGCGAAAAATTGTCAGATCATCCTCTGTCAATATCACCCATGGTTATACTGTTCAAATTAACAAGTTGAACCCGTGCACTAGAAGTTGCCTCAACAATTCATTCATTGTTGCCAGAGATATCAAATACGGCAATAAGCAAATCATAAGTGTTACTCCATCACTTTATGAGTACATCCTTGCCAATGTTCAAGAACCTGAGATTCTACGGCGACTTAGAGAGGAGACTGCATTAATACGTGGGAGTCAGATGCAGGTGGTCTCTCCTGATCAAGCACAGCTTCTCGCTACTTTGGTTCAGATTATGGGAGCTGAACGGTGTATTGAAGTTGGTGTTTACACTGGATATTCATCGTTAGCTGTTGCATTAGTCCTGCCTGAATCTGGTCGTTTAGTCGCATGTGAAAGAGACGCCAGAGCCCTTGAGATTGCAAAAAGATATTATGAGCACGCAGGTGTATTACACAAGGTGGATGTGAGACATGGCCTTGCAGCAGATGAACTGAGATCACTAATTAGGAATGGCGAAACTTGCAGCTATGATTTTGCATTCATCGATGCTGACAAGAGGAAGAATGAGGAGTATTTTGAACTGTTACTACAACTAGTGAGGGTTGGAGGGGTTATTGTGGTCGATAATGTCTTCTGGCACGGGAAAGTTGCAGATCCGACAGTAGACGATGCCAAGACGGTTAGCATTCGGAACTTCAACAAAAAGCTCTTGGCAGACGAGCGCGTAAGCACCAGCATGGTACCCATTGGAGACGGAATTACAATCTGCCGAAAAAGATAA 924 43.18 LMKASSNLGLNGFFTLAHYNLPRLGMKNEGLLNLHSFSTTFPFSMRKIVRSSSVNITHGYTVQINKLNPCTRSCLNNSFIVARDIKYGNKQIISVTPSLYEYILANVQEPEILRRLREETALIRGSQMQVVSPDQAQLLATLVQIMGAERCIEVGVYTGYSSLAVALVLPESGRLVACERDARALEIAKRYYEHAGVLHKVDVRHGLAADELRSLIRNGETCSYDFAFIDADKRKNEEYFELLLQLVRVGGVIVVDNVFWHGKVADPTVDDAKTVSIRNFNKKLLADERVSTSMVPIGDGITICRKR 307
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28389251 28393677 + Bpe012766.1 Bpe03g00858 101363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00858 307 PANTHER O-METHYLTRANSFERASE-RELATED 78 307 - -
Bpe03g00858 307 Gene3D Vaccinia Virus protein VP39 89 307 IPR029063 -
Bpe03g00858 307 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 78 307 - -
Bpe03g00858 307 Pfam O-methyltransferase 107 306 IPR002935 GO:0008171
Bpe03g00858 307 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 89 307 IPR002935 GO:0008171
Bpe03g00858 307 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 106 307 IPR029063 -
Bpe03g00858 307 CDD AdoMet_MTases 150 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00858 Bpe-Chr3:28389251 Bpe07g00372 Bpe-Chr7:3129263 7.35E-39 dispersed
Bpe03g00858 Bpe-Chr3:28389251 Bpe15g00900 Bpe-Chr15:18884480 1.76E-42 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00858 - - jre:108994419 372.089