Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00861 ACCATGGCGGACGGGGTTCTTCTTCTGGATTGCTGGGCCAGCCCTTTTGGGATGAGGGTGAGGATTGCGTTGGCGGAGAAGGGTATCGACTATGAGTATAAAGAAGAGGATTTGAAGAACAAGAGCCCACTTCTTCTTCAGGTGAACCCGGTTCATAAGAAGATTCCGGTTCTCATTCACAATGGGAAGCCTGTTTGTGAGTCCCTGATTGCTGTGGAATATCTTGAGGATGTTTTTCCGGAGAAATCTCCATTGCTTCCGGCCGATCCTTTTCTCAGATCTCAGGTCAGGTTCTGGGCTGACTTTTTGGACAAGAAGATAAATGAGATGGGGAGGAATTTGTGGCTGACAAAAGGAGAAGAACTAGAAACCTCAAAGATTGAATTCATAGAGTCCTTAAAGATAATGGAAGCAGAGCTTGGAGACAAAACCTTCTTTGGAGGTGAGAGTTTTGGGTTCCTCGACGTGGCTTTCATCCCGTTCTACACGTGGTTTTCAGTCTACGAGAAGTTCGGAAATTTGAGCATCGAGGGGGAATGTCCTAAACTCATTGCATGGGTCAAAAGATGCTTGAAGAAAGAGAGTGTTTCTAAGTCTCTTGCTGATCAGGAGAAGGTTTATGGCTTTGTTTTGCAGATGAGAAAGGCATTTGGGTTAGAGTAG 663 45.4 TMADGVLLLDCWASPFGMRVRIALAEKGIDYEYKEEDLKNKSPLLLQVNPVHKKIPVLIHNGKPVCESLIAVEYLEDVFPEKSPLLPADPFLRSQVRFWADFLDKKINEMGRNLWLTKGEELETSKIEFIESLKIMEAELGDKTFFGGESFGFLDVAFIPFYTWFSVYEKFGNLSIEGECPKLIAWVKRCLKKESVSKSLADQEKVYGFVLQMRKAFGLE 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28407574 28408411 + Bpe012769.1 Bpe03g00861 101366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00861 220 CDD GST_C_Tau 90 213 IPR045074 GO:0004364|GO:0006749
Bpe03g00861 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Bpe03g00861 220 Gene3D - 89 220 - -
Bpe03g00861 220 Gene3D Glutaredoxin 2 88 - -
Bpe03g00861 220 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 5 214 - -
Bpe03g00861 220 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Bpe03g00861 220 Pfam Glutathione S-transferase, N-terminal domain 8 76 IPR004045 -
Bpe03g00861 220 SFLD Main.3: Omega- and Tau-like 4 218 IPR045073 -
Bpe03g00861 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 214 IPR045073 -
Bpe03g00861 220 CDD GST_N_Tau 6 79 - -
Bpe03g00861 220 Pfam Glutathione S-transferase, C-terminal domain 125 189 - -
Bpe03g00861 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Bpe03g00861 220 SUPERFAMILY Thioredoxin-like 8 106 IPR036249 -
Bpe03g00861 220 SFLD Main (cytGST) 4 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00874 Bpe-Chr2:6728495 Bpe03g00861 Bpe-Chr3:28407574 4.43E-51 dispersed
Bpe03g00861 Bpe-Chr3:28407574 Bpe09g00278 Bpe-Chr9:2101810 1.77E-122 dispersed
Bpe03g00861 Bpe-Chr3:28407574 Bpe09g00277 Bpe-Chr9:2088881 7.00E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00861 K00799 - cpap:110812529 345.51