Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe03g00862 | ATGGAAGACGATACAGATCTAGATTTCAGCTTCACCAGCTGCACCTCCGCTTCCACCTCCACCGCCACCGACCGGACCTTCCACTCTTCCAGCGCCAGAAGCAGCCTTACTCTCAGCTTTAATGAATCTCGCCTCTCCACCACCTCCACAACCGCCTCCACATCTCTCCCCTTCCGCCCCCACAGGAGCTCCGACCCTAATTGGTCCGCCGTAAAGGCAGCTACTACTCTCTCCTCAGATGGGAAGCTCCACCTCCGCCACCTGAAGCTCATCCACCATATAGGTACTGGAAATCTTGGCCGAGTTTTCCTCTGTCGGCTGCGGGACAACGACCACGGCAGCTTCGCTCTTAAAGTGGTAGATAAAGAGTCTCTGAACAGCAAAAAGCTTTCTCACGTTTTAATGGAGGGTCAGATCCTCTCTATGCTCGATCATCCTTTTCTCCCCACGCTCTACGCTCGCTTCGATGTTTCTCACTATACTTGTTTCTTGATCGATTATTGCTCCGGCGGAGATCTTCATTCACTCCTTCGGAAACAGCCGGGAAACCGGTTTTCTCTTTCCGCAGTCAGATTCTTCGCCGCTGAGGTCCTGGTGGCGCTGGAATATCTGCATTCGCTCGGAATAGTTTATCGCGATCTGAAACCGGAAAACATTCTCTTACGCTCCGACGGCCACATCATGCTCTCTGATTTCGATTTATGTTTCAGAGCCGTTGTAGTCCCTGCCTTTCATACCAGGTTTCAATCTAGAAGCCTCCATTCTAGCTGCTTCACCTCCCCGATTGAGAGGACGGAAATATCGGCGGAGTTTATCGCAGAGCCTACGGCAGCGTTTTCGAACTCCTGCGTCGGAACACACGAGTATCTCGCACCGGAGCTGGCCTCCGGATGTGGACATGGCAACGGCGTAGACTGGTGGGCATTCGGAGTTTTGATATATGAATTGCTGTACGGGATGACGCCGTTCAAAGGGGAAAGCAAAGAGAGAACGCTGAGAAACATTACTTCGGGGAAGAGGGTGAGGTTTCCAGCGGCGCAGACGGAGGAGCATGGGGCGGCGGAGGCTAGAGATTTGATAACAAGATTGTTAACGCAGGATCCGAGAAGGAGGCTTGGGTGTGAAGGTGGTGCAACAGAAATCAAACGGCACCCCTTCTTCGCCGGGATAAAGTGGCCGCTGATCAGAACGTACCGGCCTCCGGAGGTGAGGGGAGGAGTGAGGAAGAGAAAGGAGGCGAGTGTCGGGCAGAAGAGACGGCGGTGGCTCAGCAACTGGAAGAGAGTTGGTGATTTTGTGAAGAGTAGGAAAGCTTCCATGGAAAACAACAACGGAAATTATTATCATTACGTCACCAAACATTACAAGCCCACAACAAACACTTGA | 1386 | 52.38 | MEDDTDLDFSFTSCTSASTSTATDRTFHSSSARSSLTLSFNESRLSTTSTTASTSLPFRPHRSSDPNWSAVKAATTLSSDGKLHLRHLKLIHHIGTGNLGRVFLCRLRDNDHGSFALKVVDKESLNSKKLSHVLMEGQILSMLDHPFLPTLYARFDVSHYTCFLIDYCSGGDLHSLLRKQPGNRFSLSAVRFFAAEVLVALEYLHSLGIVYRDLKPENILLRSDGHIMLSDFDLCFRAVVVPAFHTRFQSRSLHSSCFTSPIERTEISAEFIAEPTAAFSNSCVGTHEYLAPELASGCGHGNGVDWWAFGVLIYELLYGMTPFKGESKERTLRNITSGKRVRFPAAQTEEHGAAEARDLITRLLTQDPRRRLGCEGGATEIKRHPFFAGIKWPLIRTYRPPEVRGGVRKRKEASVGQKRRRWLSNWKRVGDFVKSRKASMENNNGNYYHYVTKHYKPTTNT | 461 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 28409099 | 28410484 | - | Bpe012770.1 | Bpe03g00862 | 101367 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe03g00862 | 461 | Gene3D | Transferase(Phosphotransferase) domain 1 | 172 | 401 | - | - | |
Bpe03g00862 | 461 | SMART | serkin_6 | 88 | 387 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe03g00862 | 461 | Gene3D | Phosphorylase Kinase; domain 1 | 87 | 171 | - | - | |
Bpe03g00862 | 461 | ProSiteProfiles | Protein kinase domain profile. | 88 | 387 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe03g00862 | 461 | PANTHER | FLIPPASE KINASE 1-RELATED | 3 | 430 | - | - | |
Bpe03g00862 | 461 | Pfam | Protein kinase domain | 90 | 387 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe03g00862 | 461 | CDD | STKc_phototropin_like | 86 | 403 | - | - | |
Bpe03g00862 | 461 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 209 | 221 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe03g00862 | 461 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WAG1 | 3 | 430 | - | - | |
Bpe03g00862 | 461 | SUPERFAMILY | Protein kinase-like (PK-like) | 65 | 401 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00862 | Bpe-Chr3:28409099 | Bpe11g01078 | Bpe-Chr11:8096133 | 4.03E-117 | dispersed | |
Bpe03g00862 | Bpe-Chr3:28409099 | Bpe04g00667 | Bpe-Chr4:4224400 | 1.07E-107 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63250 | PF00069 | Pkinase | 9.90E-56 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe03g00862 | - | - | csin:114298747 | 580.096 |