Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00862 ATGGAAGACGATACAGATCTAGATTTCAGCTTCACCAGCTGCACCTCCGCTTCCACCTCCACCGCCACCGACCGGACCTTCCACTCTTCCAGCGCCAGAAGCAGCCTTACTCTCAGCTTTAATGAATCTCGCCTCTCCACCACCTCCACAACCGCCTCCACATCTCTCCCCTTCCGCCCCCACAGGAGCTCCGACCCTAATTGGTCCGCCGTAAAGGCAGCTACTACTCTCTCCTCAGATGGGAAGCTCCACCTCCGCCACCTGAAGCTCATCCACCATATAGGTACTGGAAATCTTGGCCGAGTTTTCCTCTGTCGGCTGCGGGACAACGACCACGGCAGCTTCGCTCTTAAAGTGGTAGATAAAGAGTCTCTGAACAGCAAAAAGCTTTCTCACGTTTTAATGGAGGGTCAGATCCTCTCTATGCTCGATCATCCTTTTCTCCCCACGCTCTACGCTCGCTTCGATGTTTCTCACTATACTTGTTTCTTGATCGATTATTGCTCCGGCGGAGATCTTCATTCACTCCTTCGGAAACAGCCGGGAAACCGGTTTTCTCTTTCCGCAGTCAGATTCTTCGCCGCTGAGGTCCTGGTGGCGCTGGAATATCTGCATTCGCTCGGAATAGTTTATCGCGATCTGAAACCGGAAAACATTCTCTTACGCTCCGACGGCCACATCATGCTCTCTGATTTCGATTTATGTTTCAGAGCCGTTGTAGTCCCTGCCTTTCATACCAGGTTTCAATCTAGAAGCCTCCATTCTAGCTGCTTCACCTCCCCGATTGAGAGGACGGAAATATCGGCGGAGTTTATCGCAGAGCCTACGGCAGCGTTTTCGAACTCCTGCGTCGGAACACACGAGTATCTCGCACCGGAGCTGGCCTCCGGATGTGGACATGGCAACGGCGTAGACTGGTGGGCATTCGGAGTTTTGATATATGAATTGCTGTACGGGATGACGCCGTTCAAAGGGGAAAGCAAAGAGAGAACGCTGAGAAACATTACTTCGGGGAAGAGGGTGAGGTTTCCAGCGGCGCAGACGGAGGAGCATGGGGCGGCGGAGGCTAGAGATTTGATAACAAGATTGTTAACGCAGGATCCGAGAAGGAGGCTTGGGTGTGAAGGTGGTGCAACAGAAATCAAACGGCACCCCTTCTTCGCCGGGATAAAGTGGCCGCTGATCAGAACGTACCGGCCTCCGGAGGTGAGGGGAGGAGTGAGGAAGAGAAAGGAGGCGAGTGTCGGGCAGAAGAGACGGCGGTGGCTCAGCAACTGGAAGAGAGTTGGTGATTTTGTGAAGAGTAGGAAAGCTTCCATGGAAAACAACAACGGAAATTATTATCATTACGTCACCAAACATTACAAGCCCACAACAAACACTTGA 1386 52.38 MEDDTDLDFSFTSCTSASTSTATDRTFHSSSARSSLTLSFNESRLSTTSTTASTSLPFRPHRSSDPNWSAVKAATTLSSDGKLHLRHLKLIHHIGTGNLGRVFLCRLRDNDHGSFALKVVDKESLNSKKLSHVLMEGQILSMLDHPFLPTLYARFDVSHYTCFLIDYCSGGDLHSLLRKQPGNRFSLSAVRFFAAEVLVALEYLHSLGIVYRDLKPENILLRSDGHIMLSDFDLCFRAVVVPAFHTRFQSRSLHSSCFTSPIERTEISAEFIAEPTAAFSNSCVGTHEYLAPELASGCGHGNGVDWWAFGVLIYELLYGMTPFKGESKERTLRNITSGKRVRFPAAQTEEHGAAEARDLITRLLTQDPRRRLGCEGGATEIKRHPFFAGIKWPLIRTYRPPEVRGGVRKRKEASVGQKRRRWLSNWKRVGDFVKSRKASMENNNGNYYHYVTKHYKPTTNT 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28409099 28410484 - Bpe012770.1 Bpe03g00862 101367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00862 461 Gene3D Transferase(Phosphotransferase) domain 1 172 401 - -
Bpe03g00862 461 SMART serkin_6 88 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00862 461 Gene3D Phosphorylase Kinase; domain 1 87 171 - -
Bpe03g00862 461 ProSiteProfiles Protein kinase domain profile. 88 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00862 461 PANTHER FLIPPASE KINASE 1-RELATED 3 430 - -
Bpe03g00862 461 Pfam Protein kinase domain 90 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00862 461 CDD STKc_phototropin_like 86 403 - -
Bpe03g00862 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Bpe03g00862 461 PANTHER SERINE/THREONINE-PROTEIN KINASE WAG1 3 430 - -
Bpe03g00862 461 SUPERFAMILY Protein kinase-like (PK-like) 65 401 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00862 Bpe-Chr3:28409099 Bpe11g01078 Bpe-Chr11:8096133 4.03E-117 dispersed
Bpe03g00862 Bpe-Chr3:28409099 Bpe04g00667 Bpe-Chr4:4224400 1.07E-107 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63250 PF00069 Pkinase 9.90E-56 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00862 - - csin:114298747 580.096