Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00867 ATGTTTTTGTTCGATTCAACACAGACCATTCTCCACCTCCAAAGAAATAAAAGAACAAAAAATTATGAACGAATGAAAATAATGTTTGAGGAATGTTTCCGGATGCAGGACTATGTTGCCACAAGATGGTACAGAGCTCCAGAGCTTTGTGGGTCATTTTTCTCAAAGTATACGCCTGCAATTGATATATGGAGCATCGGATGCATCTTTGCTGAAATATTGACAGGGAAGCCATTGTTTCCTGGGAAAAGCGTAATTCATCAATTAGATTTGATCACTGATCTTCTTGGTCGGCCTTTATCAGAAACCATTTCAGGAGTTCGAAATGAGAAGGCTAGGAAATACTTGAGCGAAATGCGGAAAAAATCTCCTGTATCGTTTTCACAGAGATTTCCTAATGTTGATCCATTAGCACTCCGATTACTAGAAAGGCTGTTAGCTTTTGATCCGAAAGATCGACCAACTGCTGAGGAGGCACTGGCTGATCCTTATTTCAAGGGTCTAGCCAAAGTGGAAAGAGAGCCTTCCTGTCAGCCAATTTCCAAATTGGAATTCGAGTTCGAGAGGCGGAGGGTGACGAAGGAGGATATTAGGGAAATACTGTACAGAGAGATACTCGAATACCATCCTCAGCTTCTCAAAGACTATATGAACGGAATGGATGGCACAAATTTTCTCTATCCGAGCGCCATTGGTCACTTCCAAAAACAGTTTGCTCATTTGGAGGAAAATGGCAGCAAAAGTGCGCCTCTTGAGAGAAAGCATGTTTCCCTCCCAAGGCCTAGTATTTACTCAAGTACGGTTTCTTCAGTCACACACCCAAATTTGTGTTCATCTGACAGCCGACAAGCAAAGGAGGAGACCTCTGATAAAGTTAAAGCAGAGGGTGTTGGAAATCAGTCAAAAGTTTCACGCCCTCCACCCAGAGTGCCAATGGCAAAACCAGGGAGAGTTGTGGGACCCGTTCTACCGTACGAACCGAAAGATCTTTACGACCCAAGAATCATTCACAGAAGTGCCATTCGCTCGCCTCAGGTCGTTTCGCCGCACTGTTTCTTCCGAGCTCGGTCCTCTGTAAATCCAAAGCCTGGATTGGAGGCTGAAAAAGATAGTTCAGTAGCCATACAACCTCAACCATATAATTTGCCATCAAAAGTTGCCATTATTGACTCTAACTCTAACTCATATAATCACTCTAAAGGGGAAGCAGACGAGTTCAACGAGAGAATAATCATTGATGGAAAGCTACTACATGGGCAGTCTCAGTTTGGAGCTGCAGCCATGACCATGGCTGCTCATAGAAGTGCAGGAGCTGTCAAGTATTGA 1326 43.74 MFLFDSTQTILHLQRNKRTKNYERMKIMFEECFRMQDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEILTGKPLFPGKSVIHQLDLITDLLGRPLSETISGVRNEKARKYLSEMRKKSPVSFSQRFPNVDPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKLEFEFERRRVTKEDIREILYREILEYHPQLLKDYMNGMDGTNFLYPSAIGHFQKQFAHLEENGSKSAPLERKHVSLPRPSIYSSTVSSVTHPNLCSSDSRQAKEETSDKVKAEGVGNQSKVSRPPPRVPMAKPGRVVGPVLPYEPKDLYDPRIIHRSAIRSPQVVSPHCFFRARSSVNPKPGLEAEKDSSVAIQPQPYNLPSKVAIIDSNSNSYNHSKGEADEFNERIIIDGKLLHGQSQFGAAAMTMAAHRSAGAVKY 441
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28445672 28448334 + Bpe012775.2 Bpe03g00867 101372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00867 441 Gene3D Phosphorylase Kinase; domain 1 189 211 - -
Bpe03g00867 441 Gene3D Transferase(Phosphotransferase) domain 1 34 188 - -
Bpe03g00867 441 ProSiteProfiles Protein kinase domain profile. 1 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00867 441 Pfam Protein kinase domain 34 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00867 441 SMART serkin_6 4 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00867 441 MobiDBLite consensus disorder prediction 265 282 - -
Bpe03g00867 441 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 36 317 - -
Bpe03g00867 441 SUPERFAMILY Protein kinase-like (PK-like) 34 210 IPR011009 -
Bpe03g00867 441 MobiDBLite consensus disorder prediction 265 315 - -
Bpe03g00867 441 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 36 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00867 Bpe-Chr3:28445672 Bpe07g00510 Bpe-Chr7:10294667 9.61E-146 dispersed
Bpe03g00867 Bpe-Chr3:28445672 Bpe11g01839 Bpe-Chr11:14808273 2.23E-49 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63251 PF00069 Pkinase 5.00E-21 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00867 - K04371 rcu:8258703 559.681