Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00881 ATGACTTGTTTCCCATTCTTATTCGGGAAAAAACACCATTCATCTGGAGGAAGATTTGATGAAGACGAAGTGTCGGGCATTCATGGCGTTAATTTGTACACGTACAAAGAGCTAAGAACAGCAACAGAAGATTTTAGTCCAGTAAATAAAATCGGAGAGGGTGGTTTTGGTTCTGTCTATAAGGCCAAGTTAAAACATGGGAAGATTGCTGCCGTAAAGGTTCTTTCAGCTGAATCGAAGCAAGGGTTGAGAGAATTTTTGACAGAGATTACCGTCATCACAGAGATACAGCACGAGAACTTGGTCGAGCTCTATGGCTGTTGTGTGGAGGGAAATCACAGAATCTTAGTCTACAACTACCTCGAAAATAACAGCCTTGCCCGAACTCTCCTAGGAAAAGGCGACAATAACATCAACTTCAACTGGCGAACAAGGACTAATATTTGCATTGGAATTGCCCGAGGGCTGGCCTTTCTTCACGAGGAAGTTCGACCACATATCATTCATAGAGACATCAAAGCAAGTAACATTTTGCTTGATGGAAATTTAATGCCTAAGATTTCAGATTTCGGTCTCGCAAAACTTATCCCTCCGAGCATTTCTCATGTCAGCACCCGCGTTGCAGGAACGATTGGATATCTAGCTCCAGAATATGCAATACGAGGACAAGTAACAAGGAAATCCGATATCTACAGTTTTGGTGTCCTCCTCGTGGAAATAGTCAGCGGAAGGTGTAACACTAATACACATCTCCCGGTAGGCGATCAATATCTTCTAGAAAGGACATGGGATCTTTTTGAGCAGAAAGATCTAGTCAGATTGGTTGATACATCACTAAACGGAAACTTCGACGTTGAGGAGGCTTGTAGATATCTAAAGATTGGTCTTCTATGTACCCAAGACAGTCCACGGCTCCGACCGGCAATGTCGATCGTCGTAAAGATGCTGAGAGGAGATATCAAGATCGACGACAACAAGATAACAAAACCTGGGTTGATTTCTGATTTTATGGACCTTAAAGTTACGCATCAGACTAAAAAGCAGCCGAAAAAATCAAATCTTTCCTCCTACAAAGAAGCTTCTTCTGGGTCTGATTATCAAGACAACTCTACCTTGTCATCTGGAACTTCTACTCCTCCAAATTCCACTTTTACTGTAAAATATGATCCCAGTTTTTGA 1179 41.98 MTCFPFLFGKKHHSSGGRFDEDEVSGIHGVNLYTYKELRTATEDFSPVNKIGEGGFGSVYKAKLKHGKIAAVKVLSAESKQGLREFLTEITVITEIQHENLVELYGCCVEGNHRILVYNYLENNSLARTLLGKGDNNINFNWRTRTNICIGIARGLAFLHEEVRPHIIHRDIKASNILLDGNLMPKISDFGLAKLIPPSISHVSTRVAGTIGYLAPEYAIRGQVTRKSDIYSFGVLLVEIVSGRCNTNTHLPVGDQYLLERTWDLFEQKDLVRLVDTSLNGNFDVEEACRYLKIGLLCTQDSPRLRPAMSIVVKMLRGDIKIDDNKITKPGLISDFMDLKVTHQTKKQPKKSNLSSYKEASSGSDYQDNSTLSSGTSTPPNSTFTVKYDPSF 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28580832 28583144 + Bpe012786.1 Bpe03g00881 101386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00881 392 SUPERFAMILY Protein kinase-like (PK-like) 27 316 IPR011009 -
Bpe03g00881 392 Gene3D Phosphorylase Kinase; domain 1 18 120 - -
Bpe03g00881 392 MobiDBLite consensus disorder prediction 344 392 - -
Bpe03g00881 392 SMART serkin_6 45 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00881 392 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 378 - -
Bpe03g00881 392 Gene3D Transferase(Phosphotransferase) domain 1 121 329 - -
Bpe03g00881 392 MobiDBLite consensus disorder prediction 348 392 - -
Bpe03g00881 392 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 2 378 - -
Bpe03g00881 392 CDD STKc_IRAK 51 316 - -
Bpe03g00881 392 ProSitePatterns Protein kinases ATP-binding region signature. 51 73 IPR017441 GO:0005524
Bpe03g00881 392 ProSiteProfiles Protein kinase domain profile. 45 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00881 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Bpe03g00881 392 Pfam Protein kinase domain 48 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00881 Bpe09g00294 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00896 Bpe-Chr2:7190863 Bpe03g00881 Bpe-Chr3:28580832 1.47E-114 dispersed
Bpe03g00881 Bpe-Chr3:28580832 Bpe04g01581 Bpe-Chr4:22099642 4.72E-127 dispersed
Bpe03g00873 Bpe-Chr3:28496208 Bpe03g00881 Bpe-Chr3:28580832 3.95E-106 proximal
Bpe03g00881 Bpe-Chr3:28580832 Bpe09g00294 Bpe-Chr9:2347478 0 wgd
Bpe03g00881 Bpe-Chr3:28580832 Bpe09g00255 Bpe-Chr9:1868286 8.05E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63254 PF00069 Pkinase 2.00E-47 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00881 - - qsu:112027444 573.548