Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00904 ATGACCTACATTCACGCTGCTATCTGTGAAAGCATGCGGCTGTACCCACCGGTTCCGGTCGACACTAGGGACGCAGCGGCCGACGACGTTTTGCCGGACGGAACTATGGTAAAGAAGGGGATGAGAGTGGCTTACCATTCTTACGCAATGGGGAGGTTGGAGTCAATATGGGGAAAGGACTGGGCAGAGTTTAAACCAGAGCGATGGTTACAGCGGGAGGATTCGGCGGAGGGAACGCCCGGAAAGTGGAGGTTCGTGGGAAGAGACAATTTCACGTATCCAGTTTTTCATGCAGGACCCAGGATTTGCTTGGGCAGAGATATGGCGTTCTTGCAGATGAAGAGGCTACTGGCGGGGATTGTCAAGCAGTTCAGAGTAGTTCCGGTGGCCAGCGCCGGAGAAGAACCAGTGTTTAACCAACGCCTGACTGCGGAAATGAAAGGCGGGTTTTGGGTGAGAATTGAGGAGAGAGAAAAGAAAGAGTGA 486 53.09 MTYIHAAICESMRLYPPVPVDTRDAAADDVLPDGTMVKKGMRVAYHSYAMGRLESIWGKDWAEFKPERWLQREDSAEGTPGKWRFVGRDNFTYPVFHAGPRICLGRDMAFLQMKRLLAGIVKQFRVVPVASAGEEPVFNQRLTAEMKGGFWVRIEEREKKE 161
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28778543 28779028 - Bpe012808.1 Bpe03g00904 101409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00904 161 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 96 105 IPR017972 GO:0005506|GO:0016705
Bpe03g00904 161 PRINTS E-class P450 group IV signature 103 121 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00904 161 PRINTS E-class P450 group IV signature 1 17 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00904 161 PRINTS E-class P450 group IV signature 52 70 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00904 161 Pfam Cytochrome P450 1 140 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00904 161 PANTHER CYTOCHROME P450 94A2-LIKE 1 156 - -
Bpe03g00904 161 SUPERFAMILY Cytochrome P450 1 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00904 161 Gene3D Cytochrome P450 1 161 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bpe03g00904 161 PANTHER CYTOCHROME P450 1 156 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00904 Bpe-Chr3:28778543 Bpe06g00432 Bpe-Chr6:15706884 1.17E-78 dispersed
Bpe03g00904 Bpe-Chr3:28778543 Bpe09g00310 Bpe-Chr9:2615855 1.44E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00904 K20769 - csv:101221618 242.276