Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00910 ATTCTCAAACACCCACGAATGGATTTCGAATTCCCATCTGAATCATCGTTTGGCTGGCCGGAATCGTTTTCCTGGAAAGAGCTCTTCGACTACCAGACCTCTCTCCCGTTCAACTTCAACGACTCGGAGGAAATGCTGCTGTTCGAAGCAGTTGCAGAGGGAATAAATCTTGAAGTTTCAGAGAGCAGCTCTTTCGGAGCGGTCAAGGAAGAAGAAGTGAGCTCCTGCAATAATAACCAAAAGCAGCCATTGAAGGAGAAGTCGTACAGAGGGGTGAGAAGGCGGCCATGGGGAAAGTACGCAGCAGAAATCAGGGATTCCACCAGGCATGGGATAAGGGTCTGGCTGGGGACTTTCGACAGCGCAGAGGCCGCTGCTCTGGCCTACGATCAAGCTGCATTTTCAATCAGAGGGTCAACGGCGGTTCTTAATTTTCCGGCGGAAATGGTTCGACAGTCTCTTCAGGAAATCAAGCACGGATTCGAAGAAGGCTGTTCCCCTGTTATTGCCCTCAAGAGGAACCACTCCATGGGAAGAAAGGGGTTTTCAAACAAAAGTAAAGGAGGAGAGAAGAGGAAGAAGAAAGTAGTGGTTTTGGAGGATTTGGGTGCAGATTATTTGGACCAACTTTTGAGTTTAAGCTCCTCTTAA 651 48.54 ILKHPRMDFEFPSESSFGWPESFSWKELFDYQTSLPFNFNDSEEMLLFEAVAEGINLEVSESSSFGAVKEEEVSSCNNNQKQPLKEKSYRGVRRRPWGKYAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSIRGSTAVLNFPAEMVRQSLQEIKHGFEEGCSPVIALKRNHSMGRKGFSNKSKGGEKRKKKVVVLEDLGADYLDQLLSLSSS 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28830105 28830755 + Bpe012814.1 Bpe03g00910 101415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00910 216 CDD AP2 87 147 IPR001471 GO:0003700|GO:0006355
Bpe03g00910 216 Pfam AP2 domain 88 138 IPR001471 GO:0003700|GO:0006355
Bpe03g00910 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 28 213 - -
Bpe03g00910 216 PANTHER DNA-BINDING DOMAIN 28 213 IPR044808 GO:0003700|GO:0009873
Bpe03g00910 216 SUPERFAMILY DNA-binding domain 88 148 IPR016177 GO:0003677
Bpe03g00910 216 PRINTS Ethylene responsive element binding protein signature 89 100 IPR001471 GO:0003700|GO:0006355
Bpe03g00910 216 PRINTS Ethylene responsive element binding protein signature 128 148 IPR001471 GO:0003700|GO:0006355
Bpe03g00910 216 SMART rav1_2 88 152 IPR001471 GO:0003700|GO:0006355
Bpe03g00910 216 Gene3D AP2/ERF domain 87 148 IPR036955 GO:0003700|GO:0006355
Bpe03g00910 216 ProSiteProfiles AP2/ERF domain profile. 88 146 IPR001471 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00910 Bpe10g00373 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00910 Bpe-Chr3:28830105 Bpe10g00373 Bpe-Chr10:11289704 1.00E-61 dispersed
Bpe14g01246 Bpe-Chr14:9398041 Bpe03g00910 Bpe-Chr3:28830105 1.12E-28 wgd
Bpe03g00910 Bpe-Chr3:28830105 Bpe09g00332 Bpe-Chr9:3195004 5.77E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21135 PF00847 AP2 2.20E-14 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00910 K14516 - pop:7454341 246.899