Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00921 AAGAAAATGAGGACCAAAATTAAGAGAATAAGAGGAGCAGCAAGTGAAAATATCAGCAAGATAATGAAGTTTCTATGCTCAGGAGAGCAATTAAGAAAAGTAGACGAGGTGCTTTCTTTGTCTGGCCCTCTTGAAAAAAAGAGTTATTCAGCAAGTGGGAAGGGTTTAGCCACCAGAGAAGGTGGGAAGAAGCTGGACACAGGCAATATCGAAGAAGCCGAGTCATCGCTGCGTGAGAGTGGATGTTTGAACTATGAGGAAGCAAGAGCATTATTGGGTCGATACGAGTATCAGAAAGGAAATATTGAATCTGCGCTACATGTATTCGAAGGAATCGATATTGCTGCAGTGACTCCCAAGATAAAGATTGCCATTGCTAGAAGAATGGAGAGAATGAGGAGAAGCTCACAAAATTTTTCCACCCCACCAATGTCTATACATGCTGTAAGTTTACTATTGGAAGCCATCTTTCTCAAAGCAAAATCATTGCAAAGCCTTGGGAGGCATAAAGAAGCAGCTCAATGTTGCGAGGTTATTCTCGACACAGTGGAATCTTCACTGCCAAATGGCCTTCCTGAACACTTTGGCACTGACTGTAAATTGCAGGAGACTCTTAACAATGCCGTCGAGTTGCTTCCGGAGCTATGGAAACTGTCTGATTCCCCCTGCAAAGCAATCCTGTCGTACCGACGTGCACTTCTCTACAACTGGAACCTCGATGCAGAAACTACTGCAAGGATTCAAAAGGAGTTTTCTATTTTTCTTCTTTACAGTGACGGCGAAGCAAGCCCTCCAAATCTCAGGTCACAAATGGAGAGTTCCTTTGTACCCAAAAACAATATAGAAGAGGCTATACTCCTACTTATGATTTTGTTAAGAAAAGTTACTCGTAAAAGGATTGATTGGGATCCATCAATCTTGGATCATCTCTCATTTGCTTTATCAATATCAGGAGATACTATAGCTTTGGCTAATCTGGTGGAGGAGTTGCTTCCTGGTACTCTCAATCGAAAAGAAATGCATTACACGCTAGCTCTCTGCTATTACGGAGCGGCCGATAACTCAACCGCTTTGAATTTACTGAGGATATTGTTGAGTACACGTGAGGATCCAATTTGTCTTCCAGCTTTACTAATGGCATCAAAGATTTGTACAGAGAGTCAGAATCATGCAGAAGAAGCGCTAAGGTTTTCGCGTCGAGCAGTTCAAAACTCAGTAGGTGGATGTGATCAGCTGGGAGGGGTTGCCAATTGTTTATTAGGAATTTCACTATCATCTCGCTCAAAATCAGCCTCTTCAGATTCCGAAAGGGTTCTCAAACAAGCCGAGGCCCTTCAAGTTCTAGAAACTGCGGGGAAGATGACAAGAATGATCGACCCTCATGTTCTTTACGAGCTGAGTGTTCAAAATGCAGAACAGAGGAAATTAGATTCTGCCCTTTTTTATTCAAAACACTTGCTTAAATTGGAAGGCGGCTCGAACATGAAGTCATGGCTCTTACTTGCCAGAATTTTGTCGGCTCAGAAACAATATGTCGAAGGAGAAACTGTGATAAGTGCTGCTTTGGATCAGACCGGGAAATGGGATCAAGGAGAACTACTTCGGACGAAAGCTAAGCTTTTTGTCGTGCAGGGCGAGTTAAAGAGTGCGGTCGAGACTTATTCTGAATTGCTTGCTCTTCTTCAAGTTCAGAGTAAAAGCCTTGGATTGGGAAAGACGTTTCTTAAGAGCAGTAGAACTTTAGATAGAAGATTGGAGATGGAAGTTTGGCATGATTTAGCTTATCTCTACATAAGTTTGTCCAGATGGGACGATGCTGAGATTTGTCTCGCCAAATCGAGCGCAATCGACTTGTGTTCTGCAAGTCAATGTCACGCCACATTTACAGGTATTCTTTATGAAGCAAAAGGCGCCTATAAAGAGGCTCTCAAGTCATTTGCTGATGCTTTGATCATCGATCCTGCCCATGTTCCGAGTCTCGTTTCTACGGCTTCCGTTTTGAGGTGGCTTGGTCGACATTCACATGCAACAGCCAGAAGCTTTTTGATGGAAGCGCTGCGACTTGATCCGACAAATCATTCTGCATGGCACAACCTAGGCATCAACAAATCTGAGAGCTCCTCGTTTCAAGAGGCAGCTGAATGTTTTGAAGCTGCCATTTTTCTTGAAGAAACTGCTTCCGTAGAGCCCTTCAGAATTTAG 2202 43.19 KKMRTKIKRIRGAASENISKIMKFLCSGEQLRKVDEVLSLSGPLEKKSYSASGKGLATREGGKKLDTGNIEEAESSLRESGCLNYEEARALLGRYEYQKGNIESALHVFEGIDIAAVTPKIKIAIARRMERMRRSSQNFSTPPMSIHAVSLLLEAIFLKAKSLQSLGRHKEAAQCCEVILDTVESSLPNGLPEHFGTDCKLQETLNNAVELLPELWKLSDSPCKAILSYRRALLYNWNLDAETTARIQKEFSIFLLYSDGEASPPNLRSQMESSFVPKNNIEEAILLLMILLRKVTRKRIDWDPSILDHLSFALSISGDTIALANLVEELLPGTLNRKEMHYTLALCYYGAADNSTALNLLRILLSTREDPICLPALLMASKICTESQNHAEEALRFSRRAVQNSVGGCDQLGGVANCLLGISLSSRSKSASSDSERVLKQAEALQVLETAGKMTRMIDPHVLYELSVQNAEQRKLDSALFYSKHLLKLEGGSNMKSWLLLARILSAQKQYVEGETVISAALDQTGKWDQGELLRTKAKLFVVQGELKSAVETYSELLALLQVQSKSLGLGKTFLKSSRTLDRRLEMEVWHDLAYLYISLSRWDDAEICLAKSSAIDLCSASQCHATFTGILYEAKGAYKEALKSFADALIIDPAHVPSLVSTASVLRWLGRHSHATARSFLMEALRLDPTNHSAWHNLGINKSESSSFQEAAECFEAAIFLEETASVEPFRI 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28917003 28919603 + Bpe012826.1 Bpe03g00921 101426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00921 733 PANTHER PROTEIN NPGR2 12 732 - -
Bpe03g00921 733 SUPERFAMILY TPR-like 464 725 IPR011990 GO:0005515
Bpe03g00921 733 Gene3D Tetratricopeptide repeat domain 560 727 IPR011990 GO:0005515
Bpe03g00921 733 ProSiteProfiles TPR repeat profile. 623 656 IPR019734 GO:0005515
Bpe03g00921 733 PANTHER PROTEIN NPG1 12 732 IPR043376 -
Bpe03g00921 733 Gene3D Tetratricopeptide repeat domain 61 559 IPR011990 GO:0005515
Bpe03g00921 733 ProSiteProfiles TPR repeat profile. 693 726 IPR019734 GO:0005515
Bpe03g00921 733 SMART tpr_5 153 186 IPR019734 GO:0005515
Bpe03g00921 733 SMART tpr_5 495 528 IPR019734 GO:0005515
Bpe03g00921 733 SMART tpr_5 531 564 IPR019734 GO:0005515
Bpe03g00921 733 SMART tpr_5 693 726 IPR019734 GO:0005515
Bpe03g00921 733 SMART tpr_5 622 656 IPR019734 GO:0005515
Bpe03g00921 733 SMART tpr_5 587 620 IPR019734 GO:0005515
Bpe03g00921 733 SUPERFAMILY TPR-like 153 404 IPR011990 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00921 Bpe-Chr3:28917003 Bpe08g00941 Bpe-Chr8:11834045 0 dispersed
Bpe13g00544 Bpe-Chr13:12723507 Bpe03g00921 Bpe-Chr3:28917003 0 wgd
Bpe14g01270 Bpe-Chr14:9612794 Bpe03g00921 Bpe-Chr3:28917003 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00921 K21843 - jre:108995987 931.784