Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00927 ATGAAATCACAGGAGATGAAGTTGAAAACTCACCAACTGTTGTTCATCTTCTTCTGTTCCATTGGTTTTTTGTCTTCTGGTTCAGCTGTTGTGGATGACGATGAAGCTTTGACTCTCCTTTCAGTAAAAGCAAGTTTAGTTGATTCGTTAAACGTTCTTAAGGATTGGAAGTTGCCAGAAAGCGCCACCGAAAAAGATGGAGTTCACTGCAACTGGACTGGAGTATGGTGCGGCTCAGAAGGAGCCGTTGTGGAGCTTAATCTCTCTCTCATGAACTTAAGCGGAATTATTTCTGATGATTTTCAGAAGCTCAAGAGTTTGACTTCTCTGAACTTGAGTTGTAATGGGTTTTCAACTGCATTGCCCAGCTCGATTTCCAACATCATATCTTTGCAGAGAATTGATCTTAGTCAAAACTCATTTTCCGGCAACTTTCCAGAAGGGTTCGGAAGATTATCATCATTGATTACCTTAAACACTTCGAGCAATGATTTCTCGGGTTTACTTCCGGGAGATCTTGGAAGTGCAACCATGTTAGAGAGTCTTGATCTCAGAGGCAGTTTCTTTGAAGGTTCAGTTCCAACATCTTTCAACAAATTGCAGAAGTTAAAGTTTCTCGGCCTTTCGGGGAATAATTTGACAGGGAAAATCCCGCCGGAGATTGGTCAGATTTCATCACTGGAGAGCATAATTCTTGGTTACAATGAATTTGTAGGTGGGATTCCAGCAGAATTTGGAAATCTCACTAATCTAAAGTACCTTGATTTAGCTGTTGGCAATCTTGGTGGTGAAATTCCAGCTCAACTTGGAAATCTAAAAATGTTAGAGACAATCTTCTTGTATAAGAACAATTTTGAAGGGAAAATTCCTCCGCAAATCGGCAACATTTCCTCGCTAATATATCTAGATCTCTCCGATAATATGCTTTCAGGGGAAATTCCGGCTGAAATTTCGGAGTTGCAGAACTTAAAGCTTTTGAATCTCATGTGCAATCAGCTATCTGGTTCAGTTCCTTCAGCACTTGGAGAATTGACTCAATTGGAGGTTCTTGAGCTGTGGAACAATTCACTTTCAGGCCAACTGCCAATCAACCTTGGAAAGAACTCTAATTTGGTATGGCTGGACGTGTCATCCAATTCGTTTTCAGGCAAAATTCCAGAGACTTTGTGCAATGGAGGCAATCTCACCAAGCTCATCCTCTTCAACAATGCTTTTTCGAGCCATATTCCAATGAGTTTATCGACTTGTTCATCACTCGTACGAGTTAGAATTCAGAACAACCTTCTATCCGGGACAATTCCTCTTGGTCTTGGCAAACTTGGGAAGCTTCAAAGGCTTGAATTAGCTAATAACAGTCTCAACGGAGGAATTCCAGGCGACATTTCATTTTCGACATCCCTTTCTTTCATCGATTTTTCCCAAAACCGTCTCAGTTCTTCGCTTCCTTCAACAATTCTTCTGATTCCAAACCTCCAAACTTTTACAGTGTCAAATAATGATTTCGAAGGTGAAATCCCAGACCAATTCCAGGACTGTCCTTCTCTTTCTGTTCTTAATCTTTCATCAAATCGTCTCTCTGGAAGAATCCCAGAAAGTATTGCTTCTTGTGAGAGATTAGTGAACTTGAATCTGAGAAACAACCAGCTAACAGGAGAAATTCCAAGATCACTAGCTAACATGCTCTCTTTGTCTGTTCTTGATCTATCAAACAACTCTCTAACAGGAGGAATCCCTGAAAATTTTGGGATCTCTCCTGCCCTCGAATCGCTTAATGTCTCCTACAACAAGCTGGAGGGGCCTGTACCTTCAAATGGAATCCTCGGGACGATAAACCCAAGCGATCTAGCAGGAAATGCAGGTCTCTGTGGGGCCATTCTACCTCCATGTTCATCCAATTCTACATTTCCATCTAACCACACGAGCTCGCATAGAAAGCATGTCATGGCTTTTCTAATCATTGGATTTTCAACGATTTTAACAATTGTGATTGCCCTTTTTGCCGGAAGACACTTTTACAAACTATGGTATTCAGATGGAGGTTGCTTCGAAGAGAGATATGAAATGAGCAGTGGAGACTGGCCATGGAGATTAATGGCATATCAGAGACTCAGATTCACAAGCTCTGATATTCTGGCCTGCATTAAGGAATCAAATGTTCTAGGAATGGGAGCGACGGGCATCGTTTACAAGGCGGAGATGCCTCATCTTAACACCACTGTAGCAGTCAAGAAGCTATGGAGCTCAGAAATGGACATCGAAAATGCTAACAGAGATGATCTGGCGGGAGAGGTGAATCTGCTAGGGAAACTACGCCATAGAAACATCGTTCGATTGCTAGGGCTTATGCATAACGACTCGAAAATCATGATAGTTTACGAATTCATGGAAAATGGCAGCCTCGGAGAAGCTTTACACGGAAAACAAGCGGGGAGATTGCTTCTAGACTGGGTTTCCAGGTATAACATAGCAGTAGGAGTTGCGCAAGGGCTTGCTTACCTCCACCATGATTGTCATCCTCCGATCATCCACAGAGATATAAAATCCAATAACATACTTCTAGATTCAAATCTAGAAGCTCGAATTGCCGATTTCGGACTGGCGAGGACGATGGCTCGGAAGAACGAAACTGTATCAATGGTGGCCGGATCATACGGCTACCTTGCTCCAGAATATGGATATACTTTGAAGGTAGACGAGAAGATTGACACATACAGCTATGGAGTAGTTCTATTAGAGCTGGTGACGGGGAAGAGGCCATTGGAGGCTGAGTTCGGAGAAAACACAGAGATTGTTGAATGGGTAAGAAGGAAAATAAGAGAAAAGAGAAGCTTGGAAGAAGCACTAGACCCCATGATAGGGAATTGCAAGCACGTTCAAGAGGAAATGCTGCTAGTGCTAAGACTAGCTCTGCTATGCACAGCGAAGCTACCGAGAGACAGACCCACCATGAGAGACATCCTAACAATGCTCGCAGAAGCAAAACCCCGAAGAAAAAGCAACACAGCTGGGGATGGGTACGGATCATTTAGCAAGGAGAGGCCTGTTTTCAGCGCCTCCCCTGTCCATGGCTTCCCCTAG 3078 43.01 MKSQEMKLKTHQLLFIFFCSIGFLSSGSAVVDDDEALTLLSVKASLVDSLNVLKDWKLPESATEKDGVHCNWTGVWCGSEGAVVELNLSLMNLSGIISDDFQKLKSLTSLNLSCNGFSTALPSSISNIISLQRIDLSQNSFSGNFPEGFGRLSSLITLNTSSNDFSGLLPGDLGSATMLESLDLRGSFFEGSVPTSFNKLQKLKFLGLSGNNLTGKIPPEIGQISSLESIILGYNEFVGGIPAEFGNLTNLKYLDLAVGNLGGEIPAQLGNLKMLETIFLYKNNFEGKIPPQIGNISSLIYLDLSDNMLSGEIPAEISELQNLKLLNLMCNQLSGSVPSALGELTQLEVLELWNNSLSGQLPINLGKNSNLVWLDVSSNSFSGKIPETLCNGGNLTKLILFNNAFSSHIPMSLSTCSSLVRVRIQNNLLSGTIPLGLGKLGKLQRLELANNSLNGGIPGDISFSTSLSFIDFSQNRLSSSLPSTILLIPNLQTFTVSNNDFEGEIPDQFQDCPSLSVLNLSSNRLSGRIPESIASCERLVNLNLRNNQLTGEIPRSLANMLSLSVLDLSNNSLTGGIPENFGISPALESLNVSYNKLEGPVPSNGILGTINPSDLAGNAGLCGAILPPCSSNSTFPSNHTSSHRKHVMAFLIIGFSTILTIVIALFAGRHFYKLWYSDGGCFEERYEMSSGDWPWRLMAYQRLRFTSSDILACIKESNVLGMGATGIVYKAEMPHLNTTVAVKKLWSSEMDIENANRDDLAGEVNLLGKLRHRNIVRLLGLMHNDSKIMIVYEFMENGSLGEALHGKQAGRLLLDWVSRYNIAVGVAQGLAYLHHDCHPPIIHRDIKSNNILLDSNLEARIADFGLARTMARKNETVSMVAGSYGYLAPEYGYTLKVDEKIDTYSYGVVLLELVTGKRPLEAEFGENTEIVEWVRRKIREKRSLEEALDPMIGNCKHVQEEMLLVLRLALLCTAKLPRDRPTMRDILTMLAEAKPRRKSNTAGDGYGSFSKERPVFSASPVHGFP 1025
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 28950384 28953544 - Bpe012832.1 Bpe03g00927 101432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00927 1025 Gene3D Ribonuclease Inhibitor 186 292 IPR032675 -
Bpe03g00927 1025 Pfam Leucine rich repeat 489 549 IPR001611 GO:0005515
Bpe03g00927 1025 ProSitePatterns Protein kinases ATP-binding region signature. 720 744 IPR017441 GO:0005524
Bpe03g00927 1025 SUPERFAMILY L domain-like 370 623 - -
Bpe03g00927 1025 Gene3D Phosphorylase Kinase; domain 1 714 798 - -
Bpe03g00927 1025 Gene3D Transferase(Phosphotransferase) domain 1 799 1006 - -
Bpe03g00927 1025 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 1004 - -
Bpe03g00927 1025 PANTHER UNNAMED PRODUCT 13 1004 - -
Bpe03g00927 1025 Gene3D Ribonuclease Inhibitor 304 387 IPR032675 -
Bpe03g00927 1025 Gene3D Ribonuclease Inhibitor 31 185 IPR032675 -
Bpe03g00927 1025 SMART serkin_6 714 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00927 1025 Gene3D Ribonuclease Inhibitor 388 633 IPR032675 -
Bpe03g00927 1025 Pfam Leucine rich repeat N-terminal domain 33 77 IPR013210 -
Bpe03g00927 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672|GO:0006468
Bpe03g00927 1025 SUPERFAMILY RNI-like 85 406 - -
Bpe03g00927 1025 Pfam Leucine Rich Repeat 563 581 IPR001611 GO:0005515
Bpe03g00927 1025 SMART LRR_typ_2 104 128 IPR003591 -
Bpe03g00927 1025 SMART LRR_typ_2 512 536 IPR003591 -
Bpe03g00927 1025 SMART LRR_typ_2 200 224 IPR003591 -
Bpe03g00927 1025 SMART LRR_typ_2 560 584 IPR003591 -
Bpe03g00927 1025 SMART LRR_typ_2 440 464 IPR003591 -
Bpe03g00927 1025 SMART LRR_typ_2 296 320 IPR003591 -
Bpe03g00927 1025 SMART LRR_typ_2 344 368 IPR003591 -
Bpe03g00927 1025 SMART LRR_typ_2 152 175 IPR003591 -
Bpe03g00927 1025 Pfam Protein kinase domain 716 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00927 1025 ProSiteProfiles Protein kinase domain profile. 714 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00927 1025 SUPERFAMILY Protein kinase-like (PK-like) 710 990 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00927 Bpe-Chr3:28950384 Bpe06g00118 Bpe-Chr6:1906214 0 dispersed
Bpe03g00985 Bpe-Chr3:29399732 Bpe03g00927 Bpe-Chr3:28950384 1.02E-30 dispersed
Bpe14g01022 Bpe-Chr14:7598346 Bpe03g00927 Bpe-Chr3:28950384 2.80E-06 dispersed
Bpe02g00165 Bpe-Chr2:1141970 Bpe03g00927 Bpe-Chr3:28950384 2.13E-159 transposed
Bpe02g02150 Bpe-Chr2:22802576 Bpe03g00927 Bpe-Chr3:28950384 0 transposed
Bpe03g00359 Bpe-Chr3:8525689 Bpe03g00927 Bpe-Chr3:28950384 0 transposed
Bpe07g00858 Bpe-Chr7:14725572 Bpe03g00927 Bpe-Chr3:28950384 1.47E-06 transposed
Bpe08g00850 Bpe-Chr8:10839878 Bpe03g00927 Bpe-Chr3:28950384 8.57E-10 transposed
Bpe10g00143 Bpe-Chr10:2948407 Bpe03g00927 Bpe-Chr3:28950384 3.29E-11 transposed
Bpe12g00298 Bpe-Chr12:4029204 Bpe03g00927 Bpe-Chr3:28950384 1.36E-14 transposed
Bpe12g00532 Bpe-Chr12:11216312 Bpe03g00927 Bpe-Chr3:28950384 3.50E-15 transposed
Bpe15g00947 Bpe-Chr15:19194777 Bpe03g00927 Bpe-Chr3:28950384 3.31E-65 transposed
Bpe03g00927 Bpe-Chr3:28950384 Bpe08g00463 Bpe-Chr8:2974154 4.29E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63256 PF00069 Pkinase 4.20E-49 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00927 - - zju:112489211 1470.68