Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00947 ATGGGTGGGGAAGGTGGCAAGGTATACCGTTTGAGTGAGGTAGCCTCCCACAACTCTAAAAACGACTGCTGGATTCTCGTCGACGGCAAGGTTTACGATGTGACGAAGTTTTTACACGATCATCCCGGCGGGGAGGAGGTATTGTTGTTAGCCACAGGAAAGGACGCAAGTGATGATTTTGCGGATGTGGGACACGGAAGCACAGCCTATGCGATAATGACTGATTACTACGTCGGAGACATCGACATATCGTCCATTCCAGCAAAGGTTAAGAGCATCCCTTCGGCCTTGCCGCCTCACGAAAAGCAGGGCCCGGCTGAAAGGCAGCATCCCATTTTGAAGCTCCTCCAATATCTACTTCCTCTCATTATTTTGGGACTGGCTTTTGGAGTTGGCTTCTATACTAAGAGTAGAGAATAA 420 49.29 MGGEGGKVYRLSEVASHNSKNDCWILVDGKVYDVTKFLHDHPGGEEVLLLATGKDASDDFADVGHGSTAYAIMTDYYVGDIDISSIPAKVKSIPSALPPHEKQGPAERQHPILKLLQYLLPLIILGLAFGVGFYTKSRE 139
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29081917 29082826 - Bpe012850.1 Bpe03g00947 101452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00947 139 PANTHER - 1 136 - -
Bpe03g00947 139 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 81 IPR001199 -
Bpe03g00947 139 SMART Cyt_b5_2 9 82 IPR001199 -
Bpe03g00947 139 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 7 89 IPR036400 -
Bpe03g00947 139 PRINTS Cytochrome B5 signature 56 63 IPR001199 -
Bpe03g00947 139 PRINTS Cytochrome B5 signature 41 55 IPR001199 -
Bpe03g00947 139 PRINTS Cytochrome B5 signature 31 41 IPR001199 -
Bpe03g00947 139 PRINTS Cytochrome B5 signature 69 81 IPR001199 -
Bpe03g00947 139 PANTHER CYTOCHROME B5 1 136 - -
Bpe03g00947 139 Gene3D - 4 86 IPR036400 -
Bpe03g00947 139 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 37 44 IPR018506 GO:0020037
Bpe03g00947 139 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 6 82 IPR001199 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00947 Bpe-Chr3:29081917 Bpe14g00841 Bpe-Chr14:6314134 6.92E-43 dispersed
Bpe03g00947 Bpe-Chr3:29081917 Bpe13g00852 Bpe-Chr13:14727354 2.35E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00947 K23490 - egr:104456544 163.696