Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00961 ATGATTTTATTGACATCCTTGACTGTTGCGAAGGTCTTGAAGAGAGACATTCCATGGGAGACATACATGACAACTAAACTAATCAGTGGAACAAGCCTTCAGCTTTTAAGACGTTATGATAACAAGCCAGAAAGTTACAGAGCACAATTGCTGGAAGATGATGGTCCAGCTTATGTTCGAGTTTTTGTTAGCATTTTACGTGATATATATAAGGAGGAAACAGTGGAATATGTTCTGGCATTACTAGATGAAATGCTGACTGCAAATCCAAAAAGAGCAAGATTGTTCCATGACAAGTCTCTTGCCATGGAAGATACTTATGAACCATTCCTTAGGTTGCTTTGGAAAGGTAATTTGTTCATACAGGAGAAAAGCTGCAAAATACTTGCTCTGATAGTGAGCACAAGGCCAAAAGCCCATGATGGTGGAGGTGCCTCGTTTTCAAAGAAATCGTTCACCACTATTGATGATGTGTTGAAAGGACTGGTAGAATGGCTTTGTGCACAGCTGAAGAAGGCATCCTATCCAAGCCGTGGCATCCCAGTGGCTGTCAACTGCCTTGCAACTTTACTCAAAGAACCTGTGATCCGAACTTCTTTTCTTCAAGCAGACGGAGTGACTTTGCTTGTTCCTTTAATTACTCCGGCGTCCACTCAACAGTCTATTCAGCTTCTCTACGAAACATGTCTTTGTATTTGGCTCTTGTCCTACCACGAGCCTGCCATTGAATTCTTAGCCACTTCTAGAACTCTTCCAAGACTAGTGGAAGTTGCCAAGAGTTCCACAAAGGAGAAGGTTGTTCGGGTGGTTGTTTTGACTCTAAAGAACTTGCTCTCGAAAGGGACATTTGGTGCTGAAATGGTTGATCTTGGTCTACCGCTGATTGTGCAGAGCTTGAAAACACAAGCTTGGAGTGATGAGGATCTGTTGGAGGCTTTGAACCAACTGGACGAGGGACTAAAGGACAATATCAAGAGACTTAGTTCTTTTGATAAATACAAGCAAGAAGTCCTCCGTGGTCATCTTGATTGGTCTCCTATGCACAAGGATCCTACATTCTGGCGTGAGAATATAATGAACTTTGAAGAGAACGATTTTCAGATTCTAAGAGTCCTCCTAACTATTTTGAACACATCAAACGATCCTAGAACTCTGGCAGTGGCTTGCTATGATCTTTCGCAGTTCATCCAACACCATCCAGCTGGGAGAGTGATAGTAAATGACCTAAAGGCTAAGGAAAGGGTAATGAGATTGATGAGCCACGAAAATGCTGAGGTCACCAAAAATGCTCTCCTCTGCATCCAGAGGCTTTTCCTGGGTGCTAAGTATGCTAGCTTTTTGCAGGTTTAG 1350 42.67 MILLTSLTVAKVLKRDIPWETYMTTKLISGTSLQLLRRYDNKPESYRAQLLEDDGPAYVRVFVSILRDIYKEETVEYVLALLDEMLTANPKRARLFHDKSLAMEDTYEPFLRLLWKGNLFIQEKSCKILALIVSTRPKAHDGGGASFSKKSFTTIDDVLKGLVEWLCAQLKKASYPSRGIPVAVNCLATLLKEPVIRTSFLQADGVTLLVPLITPASTQQSIQLLYETCLCIWLLSYHEPAIEFLATSRTLPRLVEVAKSSTKEKVVRVVVLTLKNLLSKGTFGAEMVDLGLPLIVQSLKTQAWSDEDLLEALNQLDEGLKDNIKRLSSFDKYKQEVLRGHLDWSPMHKDPTFWRENIMNFEENDFQILRVLLTILNTSNDPRTLAVACYDLSQFIQHHPAGRVIVNDLKAKERVMRLMSHENAEVTKNALLCIQRLFLGAKYASFLQV 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29182262 29186398 + Bpe012863.1 Bpe03g00961 101466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00961 449 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 6 449 - -
Bpe03g00961 449 Pfam V-ATPase subunit H 327 438 IPR011987 GO:0000221|GO:1902600
Bpe03g00961 449 Pfam V-ATPase subunit H 9 320 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bpe03g00961 449 Gene3D - 340 441 IPR038497 -
Bpe03g00961 449 SMART arm_5 192 237 IPR000225 GO:0005515
Bpe03g00961 449 SMART arm_5 238 279 IPR000225 GO:0005515
Bpe03g00961 449 SMART arm_5 399 439 IPR000225 GO:0005515
Bpe03g00961 449 SUPERFAMILY ARM repeat 9 439 IPR016024 -
Bpe03g00961 449 Gene3D - 3 328 IPR011989 -
Bpe03g00961 449 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 6 449 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bpe03g00961 449 PIRSF V-ATP_synth_H 4 448 IPR004908 GO:0000221|GO:0046961|GO:1902600
Bpe03g00961 449 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 395 402 IPR018506 GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00961 K02144 - tcc:18599585 765.763