Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00968 ATGTCAACCTCGAGGTTGCTGATTTTTCTGGGTTTCTGCTGTGTTTGGATTCGCATCACCTCCTCTGTTACAGACAACAACGATGCTTCTGTACTTCAGGCTTTGAAAAATCAATGGCAAAATGTACCACCAAGCTGGGGAAACTCAAATGATCCTTGTGGAGCTGGCTGGGAAGGAGTTACCTGCAGTAATTCAAGAGTAACAGCATTGACATTATCAACCATGGGCCTCAAAGGTAAACTTGAAGGTGATATTGGAGGTCTCTCAGAGTTGACATCCTTGGACCTGTCATTCAACTTAAATCTCATAGGTTCTCTTTCTCCACGATTAGGGGATTTAAAAAATTTGAATATCTTAAGTCTTGCCGGCTGTGGCTTTAGCGGTACCATTCCAGCAGAAATAGGCAATCTTACAGAGCTAACCTTCTTGGCTCTGAATACAAATAAATTCACCGGGACGATACCTTCTTCTTTGGGTAAACTTTCCAAACTTAATTGGCTAGACTTAGCAGATAATCAATTGGTCGGAGCTGTTCCAGTTTCACCGGGCTTGGATAGTCTACTAAATGCTAAACACTTCCATTTCAATAAAAACCAGCTGTCAGGTCCCTTACCATCCGAACTATTTAGCGCTGAAATGACATTAATACATGTACTATTTGATGATAATCAACTTTCTGGGGGTATACCATCAACACTAGGACTAGTTCAAACCCTTGAGGTTCTCCGGCTTGATCGAAATGCTTTCATCGGAAGTGTACCATCCAATTTGAGCAACCTTGGAGCTGTCAATGAATTGAATCTTGCTCACAATAACTTGACAGGTCTGCTGCCAAACTTAAGCCAAACGAAGGCTTTGAGTTATTTGGACCTAAGTAACAACTCATTTACTCCATCACCAGCTCCCGATTGGTTCTCTGGCTTATCATCTCTCACGACATTGATTATGGAATACGGATCATTACAAGGAGATGTGCCACAACAAGTCTTCACTTTACCGCAGATACAGCAAGTGAAATTGAGGAACAATTCATTTAATGGGACTCTGGACATGGGAGACAGCGTCAGCACACAACTGCAACTTGTTGATTTACAGAATAATCAGATTTCCAGAATGACTGTTGGTTCAGGATACACTAAAGCATTAATTCTGGTTGGAAATCCCGTCTGCAATGGCGATCTCTCAAATTCTAATTACTGCCAATTTCAACAGACTACTGATTCTTATTCTACTAGCCTATCCAATTGTAATGGTAAAATATGTCCCACTGATCAGAAGTTGAACCCCCAGAGTTGTGAATGTGCTTATCCATATGAAGGGACTCTCTATTTTAGAGGGCCATCATTCAGGGAATTGTCCAATGTGAGTTTGTTTCATTCTCTGGAGAAAAGCTTGTGGGAGGCACTTAGTCTTACCCCCGGATCAGTTTATATCGAAAATCCTTTCTTCAATGCGAATGACTATCTTCAAATGCATCTATCACTCTTTCCTGTCACCGGAGAATCCTTCAATAGATCAGAGATTCAAAGGCTTGGGTTTGCCTTGGTCGTTCAAACTTATAAGCCTCCTTTCCAGTTCGGGCCTTACTTGTTTATTGCCTCTCCTTACGGGGTTCCGGTCCCCGACAAAGGAACCCGTATTAGCCTTGGAATGATAGTGGGTGTAACAATTGGCTGCGCGTTTCTCATTATTGGTCTTGTTGGAATTGGATTCTACGCCTTTCGGCAAAAGAAACGTGCAGAAAAAGCCATTGGATTGAGCAAACCATTTGCTTCATGGGCACCGAGCGGCAAAGACAGTGGAGGTGCACCACAGTTAAAGGGAGCAAGATGGTTCTCCTATGACGAGCTCAAAAAATGTACAAATAATTTCTCCGAGAGCAATGAGATAGGATCCGGAGGCTACGGCAAGGTTTATAGAGGAACCTTACCAGATGGAATAATAGTTGCCGTTAAACGAGCCCAGCAAGGATCAATGCAGGGGCAATCTGAGTTCAAGAATGAGATTGAATTGCTTTCACGAGTTCATCACAAAAATCTTGTTGGCCTTGTCGGGTTTTGTTTTGATAAAGGAGAACAGATGCTCGTTTATGAATTTATGCCCAATGGAACTCTTAGGGAGTCACTGTCTGGAAAATCCGGGATTCAGCTCGATTGGAAGAGAAGGCTCCGCATGGCACTTGGATCGGCTCGAGGACTGGCCTATCTTCATGAACTTGCAAGTCCTCCCATAATCCACAGAGATGTTAAGTCGGCCAACATCCTGCTGGATGGAAATTTGACTGCAAAGGTTGCAGATTTTGGTTTGTCTAAGCTGGTAGCTGATGGTGGTGAGAAAGGATATGTTTCAACTCAAGTAAAAGGCACGCTGGGTTATCTCGACCCTGAATATTACATGACTAATCAATTAACCGAGAAGAGCGATGTCTACAGTTTTGGGGTGGTTATGTTGGAACTGATTACTGCAAAGCAACCGATTGAGAAGGGAAGGTACATAGTTCGTGAAGTCCAATCGTTTATGAACAAGAGCGATGAACTCTATGGCTTGCGAGAGATAATCGACCCAACTATTAGAAACTCTTCGTATCTAATTGGGTTTGAAAGATTTGTCGATTTGGCCATGCAATGTGTTGAAGAATCAGCTGCAGACCGTCCAACTATGAGCGATGTGGTTAAGATGATCGAAACCATGTTACAGAATGATGGTATAAATACGAACTCGACATCTGCTTCCTCATCAGCAACTGACTTTTCAAAAGGTGCGATTAAACATCCTTTCTACGATGATCCTCAAAGAAAGGATTTGAATGACAGCAAAAGCGTGGAGCCATAG 2832 42.66 MSTSRLLIFLGFCCVWIRITSSVTDNNDASVLQALKNQWQNVPPSWGNSNDPCGAGWEGVTCSNSRVTALTLSTMGLKGKLEGDIGGLSELTSLDLSFNLNLIGSLSPRLGDLKNLNILSLAGCGFSGTIPAEIGNLTELTFLALNTNKFTGTIPSSLGKLSKLNWLDLADNQLVGAVPVSPGLDSLLNAKHFHFNKNQLSGPLPSELFSAEMTLIHVLFDDNQLSGGIPSTLGLVQTLEVLRLDRNAFIGSVPSNLSNLGAVNELNLAHNNLTGLLPNLSQTKALSYLDLSNNSFTPSPAPDWFSGLSSLTTLIMEYGSLQGDVPQQVFTLPQIQQVKLRNNSFNGTLDMGDSVSTQLQLVDLQNNQISRMTVGSGYTKALILVGNPVCNGDLSNSNYCQFQQTTDSYSTSLSNCNGKICPTDQKLNPQSCECAYPYEGTLYFRGPSFRELSNVSLFHSLEKSLWEALSLTPGSVYIENPFFNANDYLQMHLSLFPVTGESFNRSEIQRLGFALVVQTYKPPFQFGPYLFIASPYGVPVPDKGTRISLGMIVGVTIGCAFLIIGLVGIGFYAFRQKKRAEKAIGLSKPFASWAPSGKDSGGAPQLKGARWFSYDELKKCTNNFSESNEIGSGGYGKVYRGTLPDGIIVAVKRAQQGSMQGQSEFKNEIELLSRVHHKNLVGLVGFCFDKGEQMLVYEFMPNGTLRESLSGKSGIQLDWKRRLRMALGSARGLAYLHELASPPIIHRDVKSANILLDGNLTAKVADFGLSKLVADGGEKGYVSTQVKGTLGYLDPEYYMTNQLTEKSDVYSFGVVMLELITAKQPIEKGRYIVREVQSFMNKSDELYGLREIIDPTIRNSSYLIGFERFVDLAMQCVEESAADRPTMSDVVKMIETMLQNDGINTNSTSASSSATDFSKGAIKHPFYDDPQRKDLNDSKSVEP 943
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29225499 29231241 + Bpe012872.1 Bpe03g00968 101473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00968 943 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Bpe03g00968 943 SUPERFAMILY Protein kinase-like (PK-like) 605 895 IPR011009 -
Bpe03g00968 943 SMART serkin_6 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00968 943 Gene3D Ribonuclease Inhibitor 184 280 IPR032675 -
Bpe03g00968 943 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Bpe03g00968 943 Gene3D Ribonuclease Inhibitor 281 376 IPR032675 -
Bpe03g00968 943 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Bpe03g00968 943 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 925 - -
Bpe03g00968 943 MobiDBLite consensus disorder prediction 921 943 - -
Bpe03g00968 943 ProSitePatterns Protein kinases ATP-binding region signature. 630 652 IPR017441 GO:0005524
Bpe03g00968 943 MobiDBLite consensus disorder prediction 922 943 - -
Bpe03g00968 943 SUPERFAMILY L domain-like 42 422 - -
Bpe03g00968 943 CDD STKc_IRAK 630 895 - -
Bpe03g00968 943 ProSiteProfiles Protein kinase domain profile. 624 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00968 943 PANTHER LRR RECEPTOR-LIKE KINASE 1 925 - -
Bpe03g00968 943 Gene3D Phosphorylase Kinase; domain 1 598 699 - -
Bpe03g00968 943 Pfam Protein tyrosine and serine/threonine kinase 627 893 IPR001245 GO:0004672|GO:0006468
Bpe03g00968 943 Gene3D Transferase(Phosphotransferase) domain 1 700 919 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00968 Bpe-Chr3:29225499 Bpe05g00726 Bpe-Chr5:20761509 0 dispersed
Bpe07g00376 Bpe-Chr7:3240847 Bpe03g00968 Bpe-Chr3:29225499 3.42E-70 dispersed
Bpe11g00038 Bpe-Chr11:270115 Bpe03g00968 Bpe-Chr3:29225499 7.94E-72 dispersed
Bpe11g01186 Bpe-Chr11:8821363 Bpe03g00968 Bpe-Chr3:29225499 4.48E-60 dispersed
Bpe14g01348 Bpe-Chr14:10762313 Bpe03g00968 Bpe-Chr3:29225499 4.13E-62 dispersed
Bpe03g00968 Bpe-Chr3:29225499 Bpe10g00026 Bpe-Chr10:386710 2.09E-17 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63257 PF07714 PK_Tyr_Ser-Thr 1.70E-49 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00968 - - qsu:112004607 1394.02