Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00975 ATGGTTTCCTCTCAGTTTACTGGCTTCATGGATTCCTGCCAGGCCAAGCTCATTAAGCGTCCTTTTCTTTTTCCTCTGAAACCTATCGAAGCTGTGGATGCCAATCATGTCGAGCTAGATTTCTCTGATGTTTTTGGTCCTGTACTACTTGATGAAGCTGATTCAGCTAGTCTCTGCGTAGAAGGTGAAAGAAAGCTTGTCTTTGATGATCCAGAAGTCATTTGCCATCGGTCACATTCTTTGGTTGGTCCTTCTTCATATGTAAGTCAGTCATTTGGGCTCAGCAAGCTTACTATACATGAAAGTGAGGATTCAGTCGAAAAAATTGAATTTATCAGTGAGGATGCGGCTGGAAAAATTTTTGAACCTTCGTGTGATGATACTTTAGTTGAGAGAAATCTTGAAGGTTTGAGTTTCAATCCCATAAAGGTGCAGGGTGTTGGAATTGATGATTTTGAGATTCTGAAGGTTGTGGGTGCTGGTGCTTTTGCGAAGGTTTACCAGGTAAGAAAAAAAGGTACATCAGAGATATTTGCAATGAAAGTTATGCGGAAAGACAAGATTATGGAGAAAAATCATGCTGAATACATGATAGCTGAGAGGGAGATTTTGACAAAAGTTGAACATCCTTACATTGTCCAGCTTAGATACTCCTTTCAAACAAAGTATAGGCTATATCTTGTTCTGGACTTTGTAAATGGGGGACACCTTTTCTTTCAGCTCTACCATCATGGCCTTTTTAGGGAGGAGCTTGCTCGTTTCTATGCTGCTGAGATTGTTTCTGCCGTTTCTCACCTCCATGACAATGGCATAATGCACAGAGATCTTAAACCTGAAAATATTTTACTAGACATCGATGGCCATGCGATGCTGACTGATTTTGGGCTGGCCAAGCAATTTGAGGCAAATACGAGGGCAAATTTTATGTGTGGAACAGTAGAATATATGTCCCCTGAAATAGTTCTTGGAAAGGGCCACGACAAGGCTGCAGATTGGTGGAGTGTGGGAATTCTTACGTTTGAGATGCTCACTGGGAAGCCTCCATTTACTGGGAGTAGGCACAAAGTCCAGCAAAAGATAGTAAAGGATAAGATAAAGCTGCCGGCTTTTTTGTCAAGTGAAGCGCATTCTCTTTTGAAAGGGCTGCTGCAAAAGGATGCAGGCAAGCGCCTGGGAAATGGGCCGATGGGTGGGGAGGAGATCAAGCGCCATAAATGGTTCAAGGCGATCAATTGGAAGGAACTGGAGTCAAGAGGTGTTCAACCAAGTTTCCGCCCTCAAGTTGCTGGAAAGCATTGTGTTGCCAACTTTGAGAAACACTGGACCAACATGCCCATTGTAGATTCTCCTGTTGCCAGTCCTAAAGCTGGTGGAAATGCCTTCACAGGCTTTAGCTACGTAAGGCCACCAGCTTCAGTCCTTAGTAGAGAGAGCCCGCTCTGCTAG 1446 43.64 MVSSQFTGFMDSCQAKLIKRPFLFPLKPIEAVDANHVELDFSDVFGPVLLDEADSASLCVEGERKLVFDDPEVICHRSHSLVGPSSYVSQSFGLSKLTIHESEDSVEKIEFISEDAAGKIFEPSCDDTLVERNLEGLSFNPIKVQGVGIDDFEILKVVGAGAFAKVYQVRKKGTSEIFAMKVMRKDKIMEKNHAEYMIAEREILTKVEHPYIVQLRYSFQTKYRLYLVLDFVNGGHLFFQLYHHGLFREELARFYAAEIVSAVSHLHDNGIMHRDLKPENILLDIDGHAMLTDFGLAKQFEANTRANFMCGTVEYMSPEIVLGKGHDKAADWWSVGILTFEMLTGKPPFTGSRHKVQQKIVKDKIKLPAFLSSEAHSLLKGLLQKDAGKRLGNGPMGGEEIKRHKWFKAINWKELESRGVQPSFRPQVAGKHCVANFEKHWTNMPIVDSPVASPKAGGNAFTGFSYVRPPASVLSRESPLC 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29275513 29277964 - Bpe012879.1 Bpe03g00975 101480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00975 481 PANTHER RIBOSOMAL PROTEIN S6 KINASE 1 478 - -
Bpe03g00975 481 PANTHER SERINE/THREONINE-PROTEIN KINASE ATPK2/ATPK19 1 478 - -
Bpe03g00975 481 CDD STKc_AGC 158 407 IPR045270 GO:0004674|GO:0005524
Bpe03g00975 481 SMART pkinase_C_6 408 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe03g00975 481 Pfam Protein kinase domain 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00975 481 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Bpe03g00975 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Bpe03g00975 481 Gene3D Transferase(Phosphotransferase) domain 1 232 426 - -
Bpe03g00975 481 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bpe03g00975 481 ProSiteProfiles Protein kinase domain profile. 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00975 481 Gene3D Phosphorylase Kinase; domain 1 149 448 - -
Bpe03g00975 481 SMART serkin_6 152 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00975 481 Pfam Protein kinase C terminal domain 429 466 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bpe03g00975 481 SUPERFAMILY Protein kinase-like (PK-like) 149 472 IPR011009 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g00975 Bpe04g01311 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00975 Bpe-Chr3:29275513 Bpe12g00570 Bpe-Chr12:11520406 3.70E-160 dispersed
Bpe03g00975 Bpe-Chr3:29275513 Bpe04g01311 Bpe-Chr4:19547159 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63259 PF00069 Pkinase 3.90E-73 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00975 K04688 - zju:107431119 694.115