Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00977 ATGCTTTTGAAGCTATTTCTTGTGCTTCTCTTTACTCCTTTCGTCCTATCTTCGGACCCTGTTTTCAATGACGATGTATTAGGCTTAATAGTTTTCAAGGCGGGACTTCGTGACCCTGAAGATAAACTCATGACATGGAATGAAGACGATGATAATCCCTGCAACTGGGTTGGAATAAAATGCAATCCAAATACCAGAAGGGTCACAGAACTTGTTCTTGATGGATTCTCTCTCTCTGGGCATATAGATCGTGGACTCCTGAGGCTGCAATTTCTGCAAACTTTATCGCTTTCTAGAAACAACTTCTCAGGTACGATTAATCCTGCTCTTGGTCGCCATGGGAGTTTACAAGTGATCGATTTGAGTGAGAATAGCATTTCTGGCTCAATCCCAAGTGATTTTTTTCTCCAACGTGGGTCGTTAAGATCGGTTTCATTGGCTAGAAACTTACTTACTGGACATATTCCTGAATCTTTAAGCTTCTGCTTCAAGCTTACAGCTGTTAATTTTTCTTCCAATCAGTTGTCTGGGAGAATACCCCCACCAATCTGGTATTTGAGAAAGCTTCAATCTCTTGATTTCTCAGATAATTTACTGGAGGGAGTGATTCCTCTCGGCATTAAAAATTTGTCCAACTTGACAACGATAAATTTGCAGAAGAATCGATTGCGTGGGAAGATCCCGAATGACATTGGAGACTGCTCTCTTTTGAAGTTCATTGATTTTAGTGAGAATTTTTTTTCGGGGAGTTTTCCCGCTTCGATAAGCAGACTCAGTTCATGCTCTTCTCTGAGTCTCAGAGGAAATTCTTTTGCAGGAGAACTTCCAGAATGGATTGGACAGTTGAAGGTTCTCCAGACATTGGATCTTTCAGCGAACAATTTTTCTGGTAAAATTTCGAGTTCGATAGGCAATCTTCAACTGCTGAAGACTTTGAATGTGTCGATGAACAAATTTACCGGAAATTTGCCAGATTCGATGCAAAATTGCATAAACCTTTTGTCATTTGATGCTAGCCATAATTTACTGACTGCTACTCTTCCTTCATGGATCTTCAGGCCAGATGTGCAGAGAACGTCGGCTTTTGATAATACACCCAGTGAAAGCTTAGATTATCTTTCATTCCCATCTAATCCAAACTTTCATCCTTTTCTCCAGGTTCTGGATTTATCTTCAAATGGATTTTCTGGCCAAATTTCATTTAATGTTGAAGTTCTTCGTAGCTTGGTGTTGCTAAATCTGTCGAGAAATAGCCTTCGAGGTCCCATTCCGAAGAGCATTGGTGAACTGAAATCAGTGCAGATAATCGACTTGAGCAACAATCTACTGAATGGAAGCATTCCCTATGAAATTGGAGGAACACTTTCAGTCAAAGAGTTAAGGCTTGAAAAGAACTTCCTCTCTGGGAAAATTCCTGCTGAAATTGAGAAATGTTCATCTCTAACATCTCTGATTTTATCACAAAACAACCTCAGTGGCCAAATTCCTGCGTCCATTGGAAACCTTACAAATCTCGAATATGTAGATCTTTCGTTGAATGAATTATCGGGAAGTTTGCCAAAGGAACTGACAAATCTTTCTCATCTCATCTCCTTTAATGTCTCCCACAACCACCTTGAAGGAGAACTACCTGTTGGTGGCTTCTTCAACACTATCTCTCCCTCGTCTTTGTCATATAATCCATCACTTTGTGGAGCCGTTGTCAACCAATCCTGCCCTGCTGTCCATCCAAAGCCCATCGTCCTTAACCCCAACTCTTCAGACTCCAATTCCTCCTCTGAAAATCATCCTCACAACAAGATTATACTCAGTATATCTACACTCATTGCGATTGGGGCAGCTGCCTTCATTGCCCTCGGTGTGGTGGCTGTCACTCTCCTCAATATCCATGCACGTTCTTCCATGCTCCGTTCTGCTGCTGCTCTTGCATTGTCTGGTGGGGAAGAATTCAGTTATTCTCCACAAACAAATCCAAATTATGGCAAGCTAGTTATGTTTTCGGGCGATGCTGACTTCGTTACGGGCACCCAAGCTCTTCTTAACAAAGACTGTGAACTTGGTCGTGGTGGGTTTGGAGTTGTCTACAAAGCAGTCCTCCGAGATGGGCGTTCTGTTGCGATCAAGAAGTTAACTGTGTCGAGTTTGATTAAATCTCAAGAATGTTTCGAAAGTGAGGTGAAGAACTTTGGAAAAACTAGGCATCATAATCTTGTGACTGTTGAAGGATATTACTGGACTCCTTCCTTGCAGCTCCTCATATTTGAGTATGTCCCTAATGGAAGTTTATATAAGCATCTTCATGGCGACATATCTCTGCCTTGGCGACATAGGTTAAACATAATTCTCGGAATAGCAAAAGGGTTGGCGCATTTGCACATGAAGAACGTAATTCATTACAATCTGAAATCAACAAACATTTTGCTAGACAACTCCGGTGAGCCAAAGATCGGAGACTTTGGCCTGGCAAGGCTGCTGCCAATGTTAGATCACTGCATATTGAGCAGCAAAATTCAAAGTGCACTAGGGTACATGGCTCCGGAGTTTGCGTGTAAAACAGTGAATATTACGGAGAAATGTGACGTATATGGTTTTGGGATATTGGTTTTGGAAGTAGTGACGGGTAAGAAGCCGGTTGAATACATGGAAGACGACGTGATTGTGCTTTGTGATATGGTAAGGGGAGCTCTGGAGGAAGGGAGAGTGGAAGAATGCGTCGATGGACGACTGTCGGGTAACTTCGTGGCAGAAGAGGCAATTCCAGTGATAAAGCTTGGCTTAGTATGTTCGTCTCAAGTGCCATCAAGCCGGCCAGACATGAATGAGGTGGTGAATATCTTAGAGTTGATTCAAAGCTCTTCGGAAGCTGAGGATTTGGAATGA 2880 42.22 MLLKLFLVLLFTPFVLSSDPVFNDDVLGLIVFKAGLRDPEDKLMTWNEDDDNPCNWVGIKCNPNTRRVTELVLDGFSLSGHIDRGLLRLQFLQTLSLSRNNFSGTINPALGRHGSLQVIDLSENSISGSIPSDFFLQRGSLRSVSLARNLLTGHIPESLSFCFKLTAVNFSSNQLSGRIPPPIWYLRKLQSLDFSDNLLEGVIPLGIKNLSNLTTINLQKNRLRGKIPNDIGDCSLLKFIDFSENFFSGSFPASISRLSSCSSLSLRGNSFAGELPEWIGQLKVLQTLDLSANNFSGKISSSIGNLQLLKTLNVSMNKFTGNLPDSMQNCINLLSFDASHNLLTATLPSWIFRPDVQRTSAFDNTPSESLDYLSFPSNPNFHPFLQVLDLSSNGFSGQISFNVEVLRSLVLLNLSRNSLRGPIPKSIGELKSVQIIDLSNNLLNGSIPYEIGGTLSVKELRLEKNFLSGKIPAEIEKCSSLTSLILSQNNLSGQIPASIGNLTNLEYVDLSLNELSGSLPKELTNLSHLISFNVSHNHLEGELPVGGFFNTISPSSLSYNPSLCGAVVNQSCPAVHPKPIVLNPNSSDSNSSSENHPHNKIILSISTLIAIGAAAFIALGVVAVTLLNIHARSSMLRSAAALALSGGEEFSYSPQTNPNYGKLVMFSGDADFVTGTQALLNKDCELGRGGFGVVYKAVLRDGRSVAIKKLTVSSLIKSQECFESEVKNFGKTRHHNLVTVEGYYWTPSLQLLIFEYVPNGSLYKHLHGDISLPWRHRLNIILGIAKGLAHLHMKNVIHYNLKSTNILLDNSGEPKIGDFGLARLLPMLDHCILSSKIQSALGYMAPEFACKTVNITEKCDVYGFGILVLEVVTGKKPVEYMEDDVIVLCDMVRGALEEGRVEECVDGRLSGNFVAEEAIPVIKLGLVCSSQVPSSRPDMNEVVNILELIQSSSEAEDLE 959
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29296425 29299489 + Bpe012881.1 Bpe03g00977 101482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00977 959 ProSiteProfiles Protein kinase domain profile. 680 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00977 959 Pfam Protein kinase domain 683 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00977 959 Gene3D Transferase(Phosphotransferase) domain 1 757 958 - -
Bpe03g00977 959 CDD STKc_IRAK 686 949 - -
Bpe03g00977 959 SUPERFAMILY L domain-like 375 565 - -
Bpe03g00977 959 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Bpe03g00977 959 Gene3D Ribonuclease Inhibitor 23 179 IPR032675 -
Bpe03g00977 959 SUPERFAMILY Protein kinase-like (PK-like) 683 949 IPR011009 -
Bpe03g00977 959 ProSitePatterns Protein kinases ATP-binding region signature. 686 709 IPR017441 GO:0005524
Bpe03g00977 959 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Bpe03g00977 959 ProSiteProfiles Leucine-rich repeat profile. 115 137 IPR001611 GO:0005515
Bpe03g00977 959 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC2 2 950 - -
Bpe03g00977 959 Gene3D Ribonuclease Inhibitor 377 575 IPR032675 -
Bpe03g00977 959 SUPERFAMILY L domain-like 44 351 - -
Bpe03g00977 959 SMART LRR_typ_2 282 306 IPR003591 -
Bpe03g00977 959 SMART LRR_typ_2 210 234 IPR003591 -
Bpe03g00977 959 SMART LRR_typ_2 406 430 IPR003591 -
Bpe03g00977 959 SMART LRR_typ_2 502 525 IPR003591 -
Bpe03g00977 959 SMART LRR_typ_2 526 550 IPR003591 -
Bpe03g00977 959 SMART LRR_typ_2 186 209 IPR003591 -
Bpe03g00977 959 SMART LRR_typ_2 89 113 IPR003591 -
Bpe03g00977 959 SMART LRR_typ_2 114 137 IPR003591 -
Bpe03g00977 959 Gene3D Ribonuclease Inhibitor 276 376 IPR032675 -
Bpe03g00977 959 Gene3D Ribonuclease Inhibitor 180 275 IPR032675 -
Bpe03g00977 959 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 950 - -
Bpe03g00977 959 Gene3D Phosphorylase Kinase; domain 1 670 756 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00977 Bpe-Chr3:29296425 Bpe04g01773 Bpe-Chr4:23305272 0 dispersed
Bpe03g00977 Bpe-Chr3:29296425 Bpe07g00139 Bpe-Chr7:985173 1.00E-151 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63260 PF00069 Pkinase 7.40E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00977 - - jre:108990023 1315.83