Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00978 ATGAGTTGCAGCGAGAGCGGCGGAGGAATACAAGAGAGTGAACAAGCACATGTGGTTTTGCAGAGGTCTGTTGACTTAGAACGAAAATCTGTCTCCCGTAATGGATTGGTGACAGCCACACAGACAACAATTGATGAGAATCTTCTTGTCGACCCCAAATTACTGTTTATTGGGTCTAAGATTGGTGAGGGAGCTCATGGAAAAGTTTATGAAGGAAGGTATGGGAATCAAATAGTCGCGATCAAAGTTCTCAATCGTGGGAATACAGCAGAGGAAAGAGCTTCTCTTGAGAATCGTTTCATTCGAGAAGTAAATATGATGACTCGTGTTAAACATGATAATCTGGTCAAATTTATTGGAGCATGTAAAGATCCTTTAATGGTGATTGTGACGGAGCTCTTACCAGCAATGTCTTTGCGAAAGTATCTACTGACCATTCGACCAGAGCAGTTAGACCTTGATGTGGCTATTAGATATGCACTAGATATTGCTCGCGCAATGGAGTGTCTGCATGCAAATGGGATCATCCATAGAGATCTAAAACCTGATAATTTGCTGCTTACGGCCAATCACAGGTCCGTAAAGCTAGCAGACTTTGGCCTTGCAAGAGAAGAATCTGTGACTGAGATGATGACTGCAGAGACTGGGACTTATCGGTGGATGGCTCCCGAGTTATATAGTACAGTGACATTGCGTCGGGGAGAAAAGAAACATTACAATAACAAGGTAGATGTATACAGCTTTGGAATTGTCTTGTGGGAACTCGTGACCAACCGCATGCCGTTTGAAGGCATGTCGAATTTGCAGGCTGCTTATGCTGCTGCATTTAAGCAGGAGAGGCCTAATCTTCCGGAGGACATGTCTGCTGATCTGGCATACATCATACAATCATGTTGGGTTGAGGATTCTAACTCGAGGCCTAGCTTTGGCCAAATCATTCGCATGCTCAACGCATTTCTATTTACTCTCCCTCCCCCTTCCCCGTCAGCCATCCCAGACTGTAACACCAGCGAGGCACCAACAAGCAGCGTTGCCATGACCGAGTTTTCTGGTCGCATGAGAGGGAAGTTTGGTTTTCTGCGTCAATTGTTTGCCGCAAAAAAGGGTAAGAACTCCGAATGA 1122 45.1 MSCSESGGGIQESEQAHVVLQRSVDLERKSVSRNGLVTATQTTIDENLLVDPKLLFIGSKIGEGAHGKVYEGRYGNQIVAIKVLNRGNTAEERASLENRFIREVNMMTRVKHDNLVKFIGACKDPLMVIVTELLPAMSLRKYLLTIRPEQLDLDVAIRYALDIARAMECLHANGIIHRDLKPDNLLLTANHRSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRRGEKKHYNNKVDVYSFGIVLWELVTNRMPFEGMSNLQAAYAAAFKQERPNLPEDMSADLAYIIQSCWVEDSNSRPSFGQIIRMLNAFLFTLPPPSPSAIPDCNTSEAPTSSVAMTEFSGRMRGKFGFLRQLFAAKKGKNSE 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29312125 29314592 - Bpe012883.1 Bpe03g00978 101483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00978 373 SUPERFAMILY Protein kinase-like (PK-like) 54 342 IPR011009 -
Bpe03g00978 373 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
Bpe03g00978 373 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Bpe03g00978 373 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672|GO:0006468
Bpe03g00978 373 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Bpe03g00978 373 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Bpe03g00978 373 Gene3D Transferase(Phosphotransferase) domain 1 138 325 - -
Bpe03g00978 373 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Bpe03g00978 373 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00978 373 PANTHER SERINE-THREONINE PROTEIN KINASE 25 350 - -
Bpe03g00978 373 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Bpe03g00978 373 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 25 350 - -
Bpe03g00978 373 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Bpe03g00978 373 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00978 373 CDD STKc_MAP3K-like 61 316 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00978 Bpe-Chr3:29312125 Bpe01g00737 Bpe-Chr1:6392102 1.29E-77 dispersed
Bpe03g00978 Bpe-Chr3:29312125 Bpe08g00599 Bpe-Chr8:4344504 4.85E-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63261 PF07714 PK_Tyr_Ser-Thr 8.10E-60 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00978 - - csin:114261953 597.045