Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00985 ATGAGAAAAGTTTGCTTTCATCCACTTAAACTTATGCAGTTTTCTATGAACGGAAATGCGATTAAGTGTTCTAATTTAGTCAAGAAGAAGGGAAACTGGAAGACCCACTTCCTCTATGCTCTGTTCTTTGCTGGGTTTTTGGCTCTCAACTTTCAACATGCCGCAGGAAAAACAGGGGATGGAGTGATTGTCACAAAAGCAGATTATCAAACACTGAGAGCCTTCAAAAGTGAGCTAATTGATTTCAAAGGAGCTCTTCGTAGCTGGAACGACAGTGGATTTGGAGCTTGTTCTGGTGGGTGGGTAGGAATCAAATGCGTCAATGGACAGGTTATAGCTATTCAGCTTCCATGGAAGGGATTAGGCGGCCGAATTTCAGAGAAAATCGGAAGTCTGCAAGAGCTTCGAAAGCTTAGTCTGCATGATAACCTTCTTTCTGGTACTGTCCCTTCGTCCCTCGGCTTTCTTCCTAAACTCAGAGGGGTTTACCTTTTTAACAACCGACTTTCCGGGTCTATTCCACCTTCAATTGGCCGTAGTTCTGTTTTTCAAACTCTGGATTTAAGCAATAATTCACTTTCTGGGACAATACCTCCTGCTCTTACAAACTCCACCAGACTATACAGATTGAATCTTAGCTACAATTCATTGTCGGGTTTGATCCCGGCTAGTCTAACCCTCTCTCCTTCTCTGACGATCCTCGCTCTAAACCACAACAATTTCTCCGGTCAAATCCCGAATAGCTGGGGTGAATCGGGAAATGAAAGTTACCGCCTTCAGTTTTTGACCCTTGATCATAATCATCTTTCTGGTAGTATCCCGATTTCTGTGAGTAAGTTGAGTTGGATTGAGGAGATTTCTCTGAGCCATAATGAGCTCTCTGGTTCCTTACCCAGTGAATTAGGCAAGCTCACTCACCTTCGACTGCTTGATTTATCGACCAACACAATCAATGGTACTTTTCCTGATAGCTTTTTCAACCTATCCTCTCTTGTTTCTTTGAATCTCGAAAATAATCGCTTTAAAGACCAAATTCCTGATTCATTCGTTAGATTGAAAAATCTCTCGACGATCAACCTCAAAAACAATCAGTTCTATGGTGAAATCCCGGCGATTGTCGGAAACATCTCCGTCATCAAGCGGCTCGATTTCTCCCAAAATAACTTAACCGGAGAAATTCCGGCTTCACTCGGCAGCCTCGCCAATCTTACTTTTTTCAATGTTTCTTACAATAATCTCTCCGGTCCGGTCCCGTTGGCCCTCTCAAATAAATTCAATTCCAGCTCCTTTACAGGGAATTTTCAGCTATGTGGGTACAGCCCTTCACTACCATGCCCTTCATTACCTCAAAATCTTCCAGCTCCACCCCCAGAGGCTTCGAGAAAGCATCGCCGGAAACTGAGTACCAAGGACATTATTCTGATAGCCGCTGGGGCTCTTCTTGTGTTTCTGCTTCTATTTTGCTGCATACTGGTCTGCTGTTTGGTGAGTAAGAAAAAGAACGGTAAAATCTCCAAACCGGGGACCTCAAGGAGCACCGCGAAAGCCATTCCGGGTGGCGCTGAGATTGGATCCGGCCACGCCGGCGGGAAGCTGGTCCATTTCGATGGGCCATTTGTGTTCACGGCCGATGATCTCCTGTGCGCAACTGCAGAGATAATGGGTAAAAGTACGTACGGGACAGCATACAAAGCGACATTAGAAGATGAAAATGTTGTTGCAGTGAAGAGACTGAGGGAGAAGACGACGAAGGGGGAAAAGGAATTCGAGCATGAAGTTGCAGAAATTGGGAAGATTCGCCACCCAAATCTACTTTCTCTTAGGGCGTACTATCTGGGTCCTAAAGGAGAGAAGCTTCTTGTATACGATTACATGGCCAATGGTAGTCTCGCTTCCTTCCTCCATGCTCGAGGGCCGGAGAGCTTAATCGATTGGGCGACGAGGATGAAAATAGTTGTGGAAATCACAAGAGGACTCTGCTACCTCCACACAGAAGCTATCAACATTATCCATGGAAACCTGACCTCGAGCAACATATTACTGGATGAGAAAACAAACGCCCACATCGCCGATTTCGGCCTCTCGCGCCTCATGACCTCCGCGGCAAACACCAACGCGATCGCTACTGCAGGAACTCAAGGGTACAACGCCCCCGAGCTGTCCAAGACCAAAAAGACCACCTCAAAAACTGACATCTACAGCCTGGGGGTGATCATTCTGGAGCTCCTGACCGGAAAATCTCCGGGCGAAACGATGAACGGGATGGATTTACCTCAGTGGGTGGCTTCGACTGTGAAGGGGGAGCGAACGAATGAAGTATTCGATTTGGAACTGATGAGGGATACACAGACAATTGGCGATGAATTACTTAACACGTTGAAATTGGCTCTCCATTGCGTAGATCCGTCACCAGATGCCCGACCCGACGTTCAGCAAGTTCTGCAGCAGTTGGAGGAGATTAAGCCGGAGATGGCTTCTGGTTCCGTCCAAGACGATGCTTAG 2502 46.52 MRKVCFHPLKLMQFSMNGNAIKCSNLVKKKGNWKTHFLYALFFAGFLALNFQHAAGKTGDGVIVTKADYQTLRAFKSELIDFKGALRSWNDSGFGACSGGWVGIKCVNGQVIAIQLPWKGLGGRISEKIGSLQELRKLSLHDNLLSGTVPSSLGFLPKLRGVYLFNNRLSGSIPPSIGRSSVFQTLDLSNNSLSGTIPPALTNSTRLYRLNLSYNSLSGLIPASLTLSPSLTILALNHNNFSGQIPNSWGESGNESYRLQFLTLDHNHLSGSIPISVSKLSWIEEISLSHNELSGSLPSELGKLTHLRLLDLSTNTINGTFPDSFFNLSSLVSLNLENNRFKDQIPDSFVRLKNLSTINLKNNQFYGEIPAIVGNISVIKRLDFSQNNLTGEIPASLGSLANLTFFNVSYNNLSGPVPLALSNKFNSSSFTGNFQLCGYSPSLPCPSLPQNLPAPPPEASRKHRRKLSTKDIILIAAGALLVFLLLFCCILVCCLVSKKKNGKISKPGTSRSTAKAIPGGAEIGSGHAGGKLVHFDGPFVFTADDLLCATAEIMGKSTYGTAYKATLEDENVVAVKRLREKTTKGEKEFEHEVAEIGKIRHPNLLSLRAYYLGPKGEKLLVYDYMANGSLASFLHARGPESLIDWATRMKIVVEITRGLCYLHTEAINIIHGNLTSSNILLDEKTNAHIADFGLSRLMTSAANTNAIATAGTQGYNAPELSKTKKTTSKTDIYSLGVIILELLTGKSPGETMNGMDLPQWVASTVKGERTNEVFDLELMRDTQTIGDELLNTLKLALHCVDPSPDARPDVQQVLQQLEEIKPEMASGSVQDDA 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29399732 29402366 + Bpe012890.1 Bpe03g00985 101490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00985 833 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 11 825 - -
Bpe03g00985 833 CDD STKc_IRAK 554 820 - -
Bpe03g00985 833 Gene3D Phosphorylase Kinase; domain 1 554 625 - -
Bpe03g00985 833 SMART LRR_typ_2 156 180 IPR003591 -
Bpe03g00985 833 SMART LRR_typ_2 328 352 IPR003591 -
Bpe03g00985 833 SMART LRR_typ_2 400 423 IPR003591 -
Bpe03g00985 833 SMART LRR_typ_2 304 327 IPR003591 -
Bpe03g00985 833 SMART LRR_typ_2 132 155 IPR003591 -
Bpe03g00985 833 ProSiteProfiles Protein kinase domain profile. 548 824 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g00985 833 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 11 825 - -
Bpe03g00985 833 Gene3D Transferase(Phosphotransferase) domain 1 626 832 - -
Bpe03g00985 833 Pfam Leucine rich repeat 184 241 IPR001611 GO:0005515
Bpe03g00985 833 Pfam Leucine rich repeat 306 365 IPR001611 GO:0005515
Bpe03g00985 833 SUPERFAMILY Protein kinase-like (PK-like) 552 821 IPR011009 -
Bpe03g00985 833 SUPERFAMILY L domain-like 102 448 - -
Bpe03g00985 833 Pfam Protein tyrosine and serine/threonine kinase 552 817 IPR001245 GO:0004672|GO:0006468
Bpe03g00985 833 Gene3D Ribonuclease Inhibitor 67 181 IPR032675 -
Bpe03g00985 833 Gene3D Ribonuclease Inhibitor 182 254 IPR032675 -
Bpe03g00985 833 Gene3D Ribonuclease Inhibitor 255 443 IPR032675 -
Bpe03g00985 833 Pfam Leucine rich repeat N-terminal domain 66 106 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00915 Bpe03g00985 CCT
Bpe03g00985 Bpe04g01290 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00985 Bpe-Chr3:29399732 Bpe03g00927 Bpe-Chr3:28950384 1.02E-30 dispersed
Bpe10g00328 Bpe-Chr10:10789772 Bpe03g00985 Bpe-Chr3:29399732 1.79E-15 dispersed
Bpe13g01039 Bpe-Chr13:16062213 Bpe03g00985 Bpe-Chr3:29399732 1.89E-32 dispersed
Bpe06g00488 Bpe-Chr6:16133289 Bpe03g00985 Bpe-Chr3:29399732 1.07E-17 transposed
Bpe08g01513 Bpe-Chr8:15802651 Bpe03g00985 Bpe-Chr3:29399732 3.51E-15 transposed
Bpe03g00985 Bpe-Chr3:29399732 Bpe04g01792 Bpe-Chr4:23413628 0 wgd
Bpe03g00985 Bpe-Chr3:29399732 Bpe04g01290 Bpe-Chr4:19168854 9.79E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63262 PF07714 PK_Tyr_Ser-Thr 1.10E-39 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00985 - - jre:108982299 1068.53