Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00991 GCCATGTCAACAACATCAGATGCAACTCCAGTTTGGCTCAACAATGGCGACAACGCGTGGCAATTGACGTCCGCTACGCTTGTCGGTCTGCAAAGTATGCCGGGTCTGGTGATTCTCTACGGCAGCATCGTGAAGAAGAAATGGGCGGTGAACTCGGCTTTCATGGCCCTCTACGCCTTCGCCGCCACCCTCATATGCTGGGTTCTGGTCGGCTACCGTATGGCCTTTGGGGACGAATTGCTTCCACTCTGGGGCAAAGGGGCGCCTTCTCTCGGCCAATCCTACCTGACGAACCAAGCCCAAATCCCGGAGAGCACACACTTTCGAGAAGATGGGACGATTGAGTCTCCGAAGATCGAGCCCTTGTATCCAATGGCGTCGCTAGTTTACTTCCAGTTTACATTTGCCGCAATTACGCTTATTTTACTCGCGGGGTCTGTTCTTGGGCGGATGAACATCAAAGCTTGGATGGCTTTTGTCCCTCTTTGGTTAATTTTCTCCTACACGGTCGGAGCGTACAGTTTATGGGGCGGGGGGTTTCTCTTTCACTGGGGCGTCATCGATTATTCCGGCGGCTATGTCATCCACCTCTCCTCCGGGATCGCCGGCTTCACCGCTGCTTATTGGGTTGGTCCGAGAATAAAGAGCGATAGGGAGAGATTTCCACCCAATAACGTCTTGCTCACGCTCGCCGGGGCTGGGCTGCTTTGGATGGGCTGGTCGGGGTTCAACGGCGGTGCGCCGCGGGCAGCGAATGTTGTGGCCTCAATTGCTGTGTTGAACACAAACATAAGTGCGGCGACGAGCCTTCTAGTGTGGACCACTTTGGACGTGATTGTCTTCGGAAAACCATCTGTGATCGGAGCAGTTCAGGGCATGATCACCGGCCTCGCTTGCGTCACTCCGGGAGCAGGAGTAGTTCAACCATGGGCCGCCATAGTAATGGGAGTCCTCGCTGGCAGCATTCCATGGGTGTCTATGATGATTCTTCACAAAAAGTCCACTCTTCTACAAAAGGTGGACGACACTCTAGGAGTATTTTACACACATGGAGTTGCAGGAATTTTAGGCGGTCTTTTAACAGGGCTCCTGGCAGAGCCATCGCTGTGCAGGCTCAGCCTCCCAGTGAGCAACACAAGAGGCGCATTTTATGGAGATGGTGGGGGCATGCTGTTTGTCAAACAATTGGTTGCGGCCATGTTTATTATAGGGTGGAACATAGTCTCCACCACAATCATACTCTTGTTTATAAGAGTTTTCATTCCGTTGAGAATGCCCGACGAGGAGCTGCTGGTCGGAGACGATGCGGCTCACGGGGAGGAGGCTTATGCTCTTTGGGGAGATGGAGAGAAATTCGACCCGAATAAACACGGGTGGAATATGGGTTCTCATGCAGAGGAATTGGCTCCCTCTCCCTATGTCCATGGTGCTAGAGGGGTAACCATTGTTTTGTAA 1455 52.92 AMSTTSDATPVWLNNGDNAWQLTSATLVGLQSMPGLVILYGSIVKKKWAVNSAFMALYAFAATLICWVLVGYRMAFGDELLPLWGKGAPSLGQSYLTNQAQIPESTHFREDGTIESPKIEPLYPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSLWGGGFLFHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRIKSDRERFPPNNVLLTLAGAGLLWMGWSGFNGGAPRAANVVASIAVLNTNISAATSLLVWTTLDVIVFGKPSVIGAVQGMITGLACVTPGAGVVQPWAAIVMGVLAGSIPWVSMMILHKKSTLLQKVDDTLGVFYTHGVAGILGGLLTGLLAEPSLCRLSLPVSNTRGAFYGDGGGMLFVKQLVAAMFIIGWNIVSTTIILLFIRVFIPLRMPDEELLVGDDAAHGEEAYALWGDGEKFDPNKHGWNMGSHAEELAPSPYVHGARGVTIVL 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29438718 29440754 + Bpe012896.2 Bpe03g00991 101496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00991 484 PANTHER AMMONIUM TRANSPORTER MEP2 7 481 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bpe03g00991 484 TIGRFAM amt: ammonium transporter 17 443 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bpe03g00991 484 Pfam Ammonium Transporter Family 19 443 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bpe03g00991 484 PANTHER AMMONIUM TRANSPORTER 7 481 - -
Bpe03g00991 484 ProSitePatterns Ammonium transporters signature. 188 213 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bpe03g00991 484 PRINTS Rhesus blood group protein signature 313 331 IPR002229 GO:0005887
Bpe03g00991 484 PRINTS Rhesus blood group protein signature 227 245 IPR002229 GO:0005887
Bpe03g00991 484 PRINTS Rhesus blood group protein signature 351 367 IPR002229 GO:0005887
Bpe03g00991 484 PRINTS Rhesus blood group protein signature 132 148 IPR002229 GO:0005887
Bpe03g00991 484 PRINTS Rhesus blood group protein signature 258 280 IPR002229 GO:0005887
Bpe03g00991 484 SUPERFAMILY Ammonium transporter 12 425 - -
Bpe03g00991 484 Gene3D Ammonium transporter AmtB like domains 1 446 IPR029020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00991 Bpe-Chr3:29438718 Bpe13g00701 Bpe-Chr13:13612559 0 dispersed
Bpe01g00093 Bpe-Chr1:578981 Bpe03g00991 Bpe-Chr3:29438718 3.51E-19 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00991 K03320 - zju:107405371 845.499