Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g00998 ATGGAGACAAAAAGAAACAAACGTTTGTGGGAAGTAATCGCTAACATGATGAAAGAAAAGGGTTACAATCGCAGCGCCGAACAGTGCAAGTGCAAGTGGAAAAATCTCGTTACGCGTTATAAGGGTTGTGAAACGATGGAGCCAGAAGCCATGAGAGGTCAGTTTCCATTTTACTCCGAGCTTCAGGCGATTTTCGCCGCACGGATGCAACGAATGCTATGGGCGGAAGCCGAGAGCGGGGCCAGCGGTTCAAAAAAGAAGGCGGTTAATCTATCGTCGGACGAAGAGGAGGAGAACGAAGAGAGTGAGGGAGATCAGAAGGGCAGTACGAGAAAGAGGAAGAAAAGCAAGACGAATTACGGAAGCAGCTTTAGTTTAGGAGGAAACAGTAATAATCTGAGGGAGATGTTAGATGATTTCATGAAGCAGCAAATAAAAATGGAAATGGAATGGCGGGAAGCTTTCGAGGCGAGAGAGAAGGAGAGGAGGTTGAGAGAGATGGAGTGGAGACAAACAATGGAGGCGCTGGAAAACGAGAGAATGGCAATGGAGAGAAGCTGGAGGGAGAGAGAGGAGCAGAGAAGAGTAAGAGAGGAGGCTAGGGCTGAGAAGAGAGATGCTCTGATCACTGCTCTGCTAAACAAACTGAGAAGAGACGATCTTTAG 666 47.6 METKRNKRLWEVIANMMKEKGYNRSAEQCKCKWKNLVTRYKGCETMEPEAMRGQFPFYSELQAIFAARMQRMLWAEAESGASGSKKKAVNLSSDEEEENEESEGDQKGSTRKRKKSKTNYGSSFSLGGNSNNLREMLDDFMKQQIKMEMEWREAFEAREKERRLREMEWRQTMEALENERMAMERSWREREEQRRVREEARAEKRDALITALLNKLRRDDL 221
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29523633 29524411 - Bpe012904.1 Bpe03g00998 101503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g00998 221 MobiDBLite consensus disorder prediction 77 128 - -
Bpe03g00998 221 Pfam Myb/SANT-like DNA-binding domain 3 64 IPR044822 -
Bpe03g00998 221 Coils Coil 166 193 - -
Bpe03g00998 221 ProSiteProfiles Myb-like domain profile. 10 37 IPR001005 -
Bpe03g00998 221 PANTHER - 1 219 - -
Bpe03g00998 221 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 219 - -
Bpe03g00998 221 Gene3D - 1 42 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00998 Bpe-Chr3:29523633 Bpe09g00535 Bpe-Chr9:14127580 8.00E-06 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21141 PF13837 Myb_DNA-bind_4 1.50E-14 CL0123 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g00998 - - pvy:116115135 285.034