Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01015 ATGCTTGCTTCCATGGACTTAAATGCGTCTCCAGTACCTGAAGAGGACGAGGAAAATTATGAGAGGCGTGTAGAAGAATATAGTGCGCCGGAAGACCGGGTAGAAACTGCAGTTGATATAGCACGCAGGGAGCGAGACGAAAGACGTAAAAAGTTAAAACGAGAACGCCCAGATGAGAAACCAATGCATGTATCTCAACCATATGTTTGTGATTCGTTTTATCAAATGAAAAGCCTGAAGTCTCATGATAGAAACAGACTTCCTCCAGGGTGGTTGGATTGTCCTCCATATGGTAGTGAAATATCTTTCATTATTCCTTCTAAGGTTCCACTTGATGAAACTTTCAATGACCAGATAGCTCCGGGTAAAAGATACTCCTTTAAGCAAGTGATTCATCAACAAAGACTTGGTTTGGTGATAGATCTGACAAATACTTCTCGTTACTACACAACAGTAGAATTGAAGAAAGAGGGTATCAAGCATGTTAAGATCCCATGCAAAGGAAGGGATTCTGTACCTGACAATGCCTCAGTTAATCAATTTGTCTATGAGGTCATTCAATTTTTTTTCCGCCAAAAACAGTCAAAGAAGTATATCCTTGTACATTGCACTCATGGGCATAATCGAACAGGATATATGATTATTCATTATCTTATGCGCTCTATGTCTGTTTCTGTCGCTCAGGCAATAAAAGTATTTTCAGATGCTCGCCCTCCTGGAATCTACAAGCCTGACTATATAGATGCGCTGTATGCCTTTTATCATGAAAGAAAGCCTGAAGTAGTTGTCTGTCCCCAAACACCTGAGTGGAAAAGATCCTCTGAGCTTGATCTTAATGGTGAAGCATTGCCAGACGATGATGATGATGGAGTTTCTGCTGCTCCTTTTCATGATAATGATGATCATGTGGTGATGACAAATGATGATGTTTTGGGAGATGAAATACCTAGGGAGCAACAAGATGCCTTTCGACTCTTCTGCTATCAAATGCTTAAGTTGGGTGTTGGGGCAAGAGGAAATTCTCAATTTCCTGGGTCACACCCAGTTTCTCTCAACAGGGATAATTTACAATTGTTAAGGCAGCGTTATTATTATGCCACATGGAAAGCTGATGGAACGCGATATATGATGCTAATTACTATGGATGGGTGTTACTTGGTTGATAGGAATTTCAATTTCCGCAGGGTGCAAATGAGGTTTCCCTGCAGAAACATAAATGATGGTCTTGTAGAGAGGGCTCATCATTATACATTGCTTGATGGAGAGATGATAATTGATACTGTGCCAGGCACACAGAAGCAAGAGAGAAGATATCTTATCTATGATCTCATGGCAATTAACAACATCTCTGTTATTGAGCGACCTTTCTATGAAAGATGGAAAATGCTCGAGAAGGAAGTGATTGAACTTCGTAACTCTGAGCGCCAGAAGATTTACCATTACAGATATGATCTGGAGCCATTCAGGGTAAGGAGGAAAGATTTTTGGTTGCTCTCTGCTGTTAACAAGGTTCTAAAGGAATTCATTCCGAAGCTTTCACATGAAGCAGATGGACTAATTTTCCAGGGTTGGGATGATCCCTATATTCCTCGCACACACGAAGGGCTTTTGAAATGGAAGTATGCCCAATTGAACTCCGTTGACTTCCTATTTGAGATGGTTGACGAGGAGAGCCAGCATCTTTTTCTCTATGAACGAGGAAAGAAGAAACTTATGGAAGGGAATAGAGTTGTATTTAGAGATGGTTCAGATCCCTCTTTTTATTCTGGGAAGATAATAGAGTGCACTTGGGATTCTGACCAACAGCAATGGGACTGTATGCGAATCAGGACCGATAAATCAACTCCAAATGATTTCAATACATATAAAAAGGTTGTGATGCGAAGCATAAGAGACAATATCACTGAGGATATCTTGTTGAATGAGATTGATGAGATTATTCGTCTGCCCATGTATGCTGACAGGATAAAGATTGATAGTAAAGCACACCAGCACATAAATCGTCGGAGATGA 2013 40.54 MLASMDLNASPVPEEDEENYERRVEEYSAPEDRVETAVDIARRERDERRKKLKRERPDEKPMHVSQPYVCDSFYQMKSLKSHDRNRLPPGWLDCPPYGSEISFIIPSKVPLDETFNDQIAPGKRYSFKQVIHQQRLGLVIDLTNTSRYYTTVELKKEGIKHVKIPCKGRDSVPDNASVNQFVYEVIQFFFRQKQSKKYILVHCTHGHNRTGYMIIHYLMRSMSVSVAQAIKVFSDARPPGIYKPDYIDALYAFYHERKPEVVVCPQTPEWKRSSELDLNGEALPDDDDDGVSAAPFHDNDDHVVMTNDDVLGDEIPREQQDAFRLFCYQMLKLGVGARGNSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLVDRNFNFRRVQMRFPCRNINDGLVERAHHYTLLDGEMIIDTVPGTQKQERRYLIYDLMAINNISVIERPFYERWKMLEKEVIELRNSERQKIYHYRYDLEPFRVRRKDFWLLSAVNKVLKEFIPKLSHEADGLIFQGWDDPYIPRTHEGLLKWKYAQLNSVDFLFEMVDEESQHLFLYERGKKKLMEGNRVVFRDGSDPSFYSGKIIECTWDSDQQQWDCMRIRTDKSTPNDFNTYKKVVMRSIRDNITEDILLNEIDEIIRLPMYADRIKIDSKAHQHINRRR 670
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29596777 29603543 - Bpe012920.1 Bpe03g01015 101520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01015 670 SUPERFAMILY Nucleic acid-binding proteins 543 656 IPR012340 -
Bpe03g01015 670 ProSiteProfiles Dual specificity protein phosphatase domain profile. 105 260 IPR020422 GO:0006470|GO:0008138
Bpe03g01015 670 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 87 271 IPR029021 -
Bpe03g01015 670 CDD Adenylation_mRNA_capping 318 541 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bpe03g01015 670 PIRSF mRNA_capping_HCE 73 670 IPR017074 GO:0004484|GO:0006370|GO:0140818
Bpe03g01015 670 Pfam mRNA capping enzyme, C-terminal domain 545 639 IPR013846 -
Bpe03g01015 670 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 179 248 IPR000387 GO:0016311|GO:0016791
Bpe03g01015 670 PANTHER MRNA-CAPPING ENZYME 3 669 - -
Bpe03g01015 670 ProSiteProfiles ATP-dependent DNA ligase family profile. 438 569 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bpe03g01015 670 CDD RNA_5'-triphosphatase 90 251 - -
Bpe03g01015 670 Pfam mRNA capping enzyme, catalytic domain 347 540 IPR001339 GO:0004484|GO:0005524|GO:0006370
Bpe03g01015 670 Gene3D Protein tyrosine phosphatase superfamily 83 290 IPR029021 -
Bpe03g01015 670 Pfam Dual specificity phosphatase, catalytic domain 128 254 IPR000340 GO:0008138|GO:0016311
Bpe03g01015 670 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 669 - -
Bpe03g01015 670 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 307 541 - -
Bpe03g01015 670 SMART dsp_5 110 256 IPR020422 GO:0006470|GO:0008138
Bpe03g01015 670 Gene3D DNA ligase/mRNA capping enzyme 299 540 - -
Bpe03g01015 670 Gene3D - 541 634 IPR012340 -
Bpe03g01015 670 MobiDBLite consensus disorder prediction 1 63 - -
Bpe03g01015 670 ProSitePatterns Tyrosine specific protein phosphatases active site. 201 211 IPR016130 GO:0016311|GO:0016791
Bpe03g01015 670 MobiDBLite consensus disorder prediction 15 62 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01015 K13917 - qsu:112006691 1046.96