Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01037 ATGGCCGCCGTGGCTGTGAAAATGCTCTGCATTGCTACTCTGCTCACCCTTTTTGTAGTTTCGAATGCAAGAATCCCCGGTGCTTACGGCGGCGGACAGTGGCACACTGCCCACGCCACTTTCTACGGCGGCGGTGACGCCTCTGGAACTATGGGCGGTGCTTGTGGTTACGGTAATTTATACAGCCAGGGCTACGGCGTAAACACGGCGGCGTTGAGCACAGCTTTATTCAACAGTGGGCTAAGCTGCGGCGCTTGCTTCGAAATTAAGTGCGATAACGACCCAAAATGGTGCCACCCTGGAAATCCTTCAATCTTGGTCACTGCCACTAACTTTTGCCCTCCTAACTACGCTCTTCCGAATGATAACGGCGGTTGGTGCAACCCTCCTCGGCCTCACTTCGACCTCGCCATGCCTATGTTTCTGAAGATTGCCGAGTACCGCGCCGGTATTGTCCCCGTTGCCTTTCGCCGTGTTCCATGTAGAAAGCAAGGCGGAATCAGATTCACAATCAACGGCTTCCGTTACTTCAACCTAGTTCTGATCACCAACGTCGCGGGGGCAGGAGACATCGTGCGGGTGAGCGTAAAGGGTACAAAGACTGGCTGGATGAGCATGAGCCGGAACTGGGGCCAGAACTGGCAGTCCAACGCCGTCTTGGTCGGCCAGTCCCTTTCCTTCAGAATAACCGGCAGCGACAGACGCACATCCACATCGTGGAACGTGGCACCATCCAATTGGCAGTTCGGCCAGACTTTCGCCGGAAAGAATTTCCGCGTC 780 55.26 MAAVAVKMLCIATLLTLFVVSNARIPGAYGGGQWHTAHATFYGGGDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCDNDPKWCHPGNPSILVTATNFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAFRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGDIVRVSVKGTKTGWMSMSRNWGQNWQSNAVLVGQSLSFRITGSDRRTSTSWNVAPSNWQFGQTFAGKNFRV 260
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29712682 29714199 + Bpe025409 Bpe03g01037 101542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01037 260 PRINTS Expansin/Lol pI family signature 33 48 IPR007118 GO:0005576
Bpe03g01037 260 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Bpe03g01037 260 PRINTS Expansin/Lol pI family signature 51 69 IPR007118 GO:0005576
Bpe03g01037 260 PRINTS Expansin/Lol pI family signature 241 255 IPR007118 GO:0005576
Bpe03g01037 260 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Bpe03g01037 260 PRINTS Expansin/Lol pI family signature 149 165 IPR007118 GO:0005576
Bpe03g01037 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 255 IPR007117 -
Bpe03g01037 260 SMART dpbb_1 69 156 IPR007112 -
Bpe03g01037 260 Pfam Lytic transglycolase 69 155 IPR009009 -
Bpe03g01037 260 Pfam Expansin C-terminal domain 167 244 IPR007117 -
Bpe03g01037 260 Gene3D - 20 162 IPR036908 -
Bpe03g01037 260 SUPERFAMILY Barwin-like endoglucanases 33 184 IPR036908 -
Bpe03g01037 260 PRINTS Expansin signature 165 177 IPR002963 GO:0009664
Bpe03g01037 260 PRINTS Expansin signature 64 78 IPR002963 GO:0009664
Bpe03g01037 260 PRINTS Expansin signature 177 198 IPR002963 GO:0009664
Bpe03g01037 260 PRINTS Expansin signature 141 154 IPR002963 GO:0009664
Bpe03g01037 260 PRINTS Expansin signature 212 233 IPR002963 GO:0009664
Bpe03g01037 260 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Bpe03g01037 260 PRINTS Expansin signature 105 115 IPR002963 GO:0009664
Bpe03g01037 260 PRINTS Expansin signature 124 141 IPR002963 GO:0009664
Bpe03g01037 260 PRINTS Expansin signature 241 257 IPR002963 GO:0009664
Bpe03g01037 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 52 166 IPR007112 -
Bpe03g01037 260 SUPERFAMILY PHL pollen allergen 163 254 IPR036749 -
Bpe03g01037 260 PANTHER EXPANSIN-A15 5 259 IPR002963 GO:0009664
Bpe03g01037 260 PANTHER EXPANSIN 5 259 - -
Bpe03g01037 260 Gene3D - 166 258 IPR036749 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01037 Bpe04g00743 CCT
Bpe03g01037 Bpe04g00680 CCT
Bpe03g01037 Bpe04g00743 ECH
Bpe03g01037 Bpe04g01834 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01037 Bpe-Chr3:29712682 Bpe04g01713 Bpe-Chr4:22972599 3.18E-153 dispersed
Bpe01g00128 Bpe-Chr1:758960 Bpe03g01037 Bpe-Chr3:29712682 1.06E-165 wgd
Bpe03g01037 Bpe-Chr3:29712682 Bpe04g01834 Bpe-Chr4:23631699 3.53E-164 wgd
Bpe03g01037 Bpe-Chr3:29712682 Bpe04g00743 Bpe-Chr4:4754375 2.01E-165 wgd
Bpe03g01037 Bpe-Chr3:29712682 Bpe08g00100 Bpe-Chr8:548069 5.60E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01037 - - csin:114261994 489.189