Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01053 ATGCCGAGAAAGGGAATGAGGAGTATCTGTTTCAACTCTAGAACGCTCTCTTCTTCCGGAGATCCCGTCTCCACCACTCGTCGCCGGAATTTCTTTTCCGAGTCAATGATCGATCAGAACATTGAATCTGCGGCGGAAATTATAATGAAATGGAACCCTGATTCTTCATCTTACGCGAGAGTTACTTCAATGTTTTATGAAGATAAGAATGAAGCTATGAAGTTCATAAAGTGCACCAATGATCTTCAAAAAGCCATGCAGTCCTTGGCTTCAGACGTCTCCGGTTCAGAAAAATTAGTTTATGCTCAGGGTTTGATGCAGATAGCCATGAAAAGGCTTCAGAAAGAGTTCTACCAGATTCTCTCGATGAACCGAGCTCACCTGGATCCGGAATCCGTCTCTGCTCGATCCTCCCGCTGCTCCACCAGATCCAGCGTCTCCGATTACGATGACAACGACGAAATCAGGATAGTGGGTAATTCTATCTCTGAAGTAGAAGAGGTTTCTTCTATAGCCATGGCGGATCTGAAATCCATAGCCGAGTGCATGATATCCTCCGGGTATGCTAAAGAATGCGTGAGCATTTACAAAATCATAAGAAAATCGATCATCGACGAAGGAATTTATCGTCTAGGCGTTGAGAAATCAAGTTCTTCCCAGATTAACAAAATGGCATGGGATGTTCTTGATTTTAGAATAAAAAACTGGTTGGAAGCCATTAAAATTGCGATGAGGACTCTCTTCAACGGCGAGAGGATTCTATGCGACCACGTCTTTGCAGTGTCGGAACCCATTAGAGAATCGATTTTCGCTGATATTTCCAAAGAAGGTGCTTCTCTCCTGTTTAAATTCCCCGATCTGGCAGCGAAAAGCAAGAAATCTCCAGAAAAGGTTTTCCGTTTGCTCGACATGTACACAGCCATCGCTGAAAATTGGGAGGACATCGAAACCATTTTTGCCTTCGAATCCACCTCCGTCGTCCGATTGCAGGCTCTCACCTCGCTCGCCAAACTCGGTGAGTCGGTACGAGTTATAGTTTCGGATTTTGAATCGTCAATTCATAAAGACCAATCGAAATCACTGGTGGCGGGTGGCGGAGTCCACGCTTTGACTATTAACGCGATGAATTATCTCTCTCTTCTCGGCGATTACAACGTCATCCTCACTGATATTTTCGCCGACTGGATCTCGGTGGAGAAATCATCGCTGCCGGATTCCTATTTCGACGGTCCAGATTTCGACGACTCGTCGAAAACTTCAGTCTCCTTACGCATGGCGTGGCTCATCCTTGTTCTCCTATGTAAACTCGACAGAAAAGCAGAAAATTACAAAGACGTGTCATCGTCTTACATCTTCTTAGCAAACAATCTGCAATACGTCGTCTCTAAAGTCCGGTCGTCGAACCTCAAGTATGTTCTCGGCGACGACTGGATCGCAAAGCATGAGGCCAAAGTAAAGCAGTTTGCAGTAAATTACGAGCGACTAGCTTGGGGCGGCGTTTTCTCATCTTTGCTGGAGAATCCAAAAGCGAAGAGATCAGAAGCAGAAGGAAAGAAATTAATGAGGAACTTCAACCTAGCTTTCGAGCAAGCGTACCGGAAGCAAAGTTTAAACGTCGTGCTGGACTCGAAACTCCGAGACGAAATAAAAGTTTCCATTGCGAGAAAGATAGTTCCGGTTTATCGGGAGCTCTTCAATAGCCTAAAGTCCTCAGTTAGATCGGAGAGAAGCTCGGAGGTCGACGCCAAATTCGCTCCAGAAGATATCGGACATTACTTATCGGATCTCTTTTTCGGACCAATCGCATCAGAAAGTTCGTCGTCTTCAACGTCATCATCTCGTCAGCGGCATTTGGGTTCATCCCGGTGA 1869 45.53 MPRKGMRSICFNSRTLSSSGDPVSTTRRRNFFSESMIDQNIESAAEIIMKWNPDSSSYARVTSMFYEDKNEAMKFIKCTNDLQKAMQSLASDVSGSEKLVYAQGLMQIAMKRLQKEFYQILSMNRAHLDPESVSARSSRCSTRSSVSDYDDNDEIRIVGNSISEVEEVSSIAMADLKSIAECMISSGYAKECVSIYKIIRKSIIDEGIYRLGVEKSSSSQINKMAWDVLDFRIKNWLEAIKIAMRTLFNGERILCDHVFAVSEPIRESIFADISKEGASLLFKFPDLAAKSKKSPEKVFRLLDMYTAIAENWEDIETIFAFESTSVVRLQALTSLAKLGESVRVIVSDFESSIHKDQSKSLVAGGGVHALTINAMNYLSLLGDYNVILTDIFADWISVEKSSLPDSYFDGPDFDDSSKTSVSLRMAWLILVLLCKLDRKAENYKDVSSSYIFLANNLQYVVSKVRSSNLKYVLGDDWIAKHEAKVKQFAVNYERLAWGGVFSSLLENPKAKRSEAEGKKLMRNFNLAFEQAYRKQSLNVVLDSKLRDEIKVSIARKIVPVYRELFNSLKSSVRSERSSEVDAKFAPEDIGHYLSDLFFGPIASESSSSSTSSSRQRHLGSSR 622
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29817665 29819533 + Bpe012950.1 Bpe03g01053 101558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01053 622 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 6 611 - -
Bpe03g01053 622 PANTHER EXOCYST COMPLEX PROTEIN EXO70 6 611 IPR004140 GO:0000145|GO:0006887
Bpe03g01053 622 MobiDBLite consensus disorder prediction 602 622 - -
Bpe03g01053 622 Pfam Exo70 exocyst complex subunit 234 595 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bpe03g01053 622 Gene3D Exocyst complex component Exo70 57 606 - -
Bpe03g01053 622 SUPERFAMILY Cullin repeat-like 69 597 IPR016159 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01053 Bpe-Chr3:29817665 Bpe04g01604 Bpe-Chr4:22222988 0 dispersed
Bpe01g00153 Bpe-Chr1:856096 Bpe03g01053 Bpe-Chr3:29817665 0 wgd
Bpe15g01092 Bpe-Chr15:20102484 Bpe03g01053 Bpe-Chr3:29817665 0 wgd
Bpe02g00817 Bpe-Chr2:6012225 Bpe03g01053 Bpe-Chr3:29817665 1.22E-179 wgd
Bpe03g01053 Bpe-Chr3:29817665 Bpe04g01857 Bpe-Chr4:23774133 0 wgd
Bpe03g01053 Bpe-Chr3:29817665 Bpe04g00723 Bpe-Chr4:4657259 0 wgd
Bpe03g01053 Bpe-Chr3:29817665 Bpe08g00122 Bpe-Chr8:630500 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01053 K07195 - jre:108988422 796.964