Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01075 ATGGGGAAGAACGACCAAGAGCAACCGTTGCCACCCACTGTGGGATCGGAGCCGACGAACCGGAATGTGGGTGCCCGATGTGGTTATGGGTATGAGAGAATTCGGAGGATCGTTGGGCTTAGATGCCTCCTCGTTCTACTTCTCTCGGCTGCTGTTTTTCTTTCTGCCGTGTTTTGGTTGCCCCCGTTTTTCCATTCCTCAGATCAGAAGGATCTGGATATTGATTCCAAGTTCAAAGATCATCAAATTGTAGCAAGTTTCAACGTCGAGAAGTCTGTTACTTTTCTCGAAGAGCATGTCCTGCAGCTTGAGGATGATATTTTTGAAGAGATTCCCGTACCTTCAGCCAAGGCCATTGTCTTATCTATGGAACCATTAATTGGATCAAATTTAACGGAAGTAGTGTTTGCAGTTGATCCAGAAAGAAGTTATTCAGAAATTCCTGAAACATCCTTAAGTTTGATCAGATCATCTTTTGAAACTCTGGTTCTTAATCGTCCACCTCTTCGCCTCACTACAGACCTGTTCGGAAAACCCACTTCTTTCGAGGTGCTGAAATTCCGTGATGGAATTACTATAATTCCCCCGCAAAGTGCATTTCTTTTGCAGAAAGTGCAAATCTATTTCAACTTCACCTTAAACTTTTCTATTTACCAAATTCAATCAAATTTCAACAAACTTACAAGCCAGTTGAAGTTGGGACTGAGTCTAGCTCCCTATGAGAACATGTATATACGCTTATCAAACATGAGAGGTTCGACTGTTGGCGCACCCACTATTGTTCAGTGCTCTGTGCTGTTGTCAGTCGGGAATACTCCATTGACACGAAGGTTAAAGCAGTTGGCTCAGACCATCACTGGTTCGCACTTGAAAAACCTCGGCCTGAACAATACGGTATTTGGAAGGGTTAAGCAAGTTCGCCTTTCATCGATTCTTAATCACTCGCTCAGTGGTGGTAATGGAAATGGTTCTCCTTCATCACCTTCTCCTGCTCCTGATCATAGTTCCCATCATCACCACCACCACCACCACCATCACCACCACCACCACCATCATCACCATGGCCATGGCCATGGCCATGGCCATGACCATCTAGCTCCAGCCATTTCTCCTCCTTGGACCGAGAAGGGTCCACCTGGCGATCAAATCGGTGCCTCTTCTCCGGAAGATGGCTCACTTGCCCCTCAGATAAGCTCTCCGCCCCACAAGAGAAGTTGTGAAGTGAAGCCACGGAGCAAGGTAAGAAAACGGAATCATTTAGCACCCGCTCCTTCACCGGATATTTCTCTGAAATATGCTGCAGCTTCACCACGGACTCAGACAAATCCACAACCACCAGCTTCTCCTACAGTTCTGGCATCAAGTCCATTTCGGAGCGTAATTTATGCGCATCTTCAACCTCCGTCTGTGAGTGATCATGGAAAAGACGTGACCCCATCAGTTGCTCCATCTCCATCTCTATCTCTGGGTAAGTTAAGCGGTGGAATTTAG 1491 46.34 MGKNDQEQPLPPTVGSEPTNRNVGARCGYGYERIRRIVGLRCLLVLLLSAAVFLSAVFWLPPFFHSSDQKDLDIDSKFKDHQIVASFNVEKSVTFLEEHVLQLEDDIFEEIPVPSAKAIVLSMEPLIGSNLTEVVFAVDPERSYSEIPETSLSLIRSSFETLVLNRPPLRLTTDLFGKPTSFEVLKFRDGITIIPPQSAFLLQKVQIYFNFTLNFSIYQIQSNFNKLTSQLKLGLSLAPYENMYIRLSNMRGSTVGAPTIVQCSVLLSVGNTPLTRRLKQLAQTITGSHLKNLGLNNTVFGRVKQVRLSSILNHSLSGGNGNGSPSSPSPAPDHSSHHHHHHHHHHHHHHHHHHGHGHGHGHDHLAPAISPPWTEKGPPGDQIGASSPEDGSLAPQISSPPHKRSCEVKPRSKVRKRNHLAPAPSPDISLKYAAASPRTQTNPQPPASPTVLASSPFRSVIYAHLQPPSVSDHGKDVTPSVAPSPSLSLGKLSGGI 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29954470 29956936 + Bpe012971.1 Bpe03g01075 101580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01075 496 MobiDBLite consensus disorder prediction 314 332 - -
Bpe03g01075 496 MobiDBLite consensus disorder prediction 314 428 - -
Bpe03g01075 496 PANTHER F20B24.21 1 489 - -
Bpe03g01075 496 MobiDBLite consensus disorder prediction 467 496 - -
Bpe03g01075 496 MobiDBLite consensus disorder prediction 1 21 - -
Bpe03g01075 496 MobiDBLite consensus disorder prediction 335 360 - -
Bpe03g01075 496 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 489 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00032 Bpe-Chr2:251439 Bpe03g01075 Bpe-Chr3:29954470 1.90E-129 dispersed
Bpe03g01075 Bpe-Chr3:29954470 Bpe15g00045 Bpe-Chr15:5232347 5.37E-54 dispersed
Bpe03g01075 Bpe-Chr3:29954470 Bpe04g01368 Bpe-Chr4:20298718 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01075 - - jre:109008135 438.343