Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01087 ATGCATCTCAATCCCATTTCAACATCCGTTGCTCAACGAGAAAGCTGGGAGGAGTCTAACATGGTGGATGCCAGCCCCCGGACTGATACTTCAACCGATGACACCGATGAGAAAAATCAGAGGTTTGAAAGGAATCAATTAATCGTCGGTGGAGGCTCCGATTCAAATAACACATTGAGAGAAAAATCTGGGGATCAAAAGACATTGCGCAGACTTGCTCAAAATCGAGAAGCTGCTAGAAAAAGCAGGTTGAGGAAAAAGGCTTACGTACAGCAGCTAGAGAGTAGCCGGTTGAAGCTAACCCAGCTTGAGCAGGAACTCCAGCGAGCACGACAACAGGGGATATTTATTTCAGGTTCTGGAGATCAATCGCATTCGATTAGTGGAAATGGTGCACTAGCCTTCGATACAGAATATTCGCGTTGGCTAGAAGAGCATAACAGGCTAGTAAACGAGCTGAGAACGGGTGTTAATTCTCATGTGGGCGATGCCGAACTTCGTATTATTGTCGACGACGTCACTGCACATTTTGATGACATTTTCAGGTTGAAAGGCATCGCAGCCAAAACTGACGTTTTCCACATTTTTTCCGGAATGTGGAAAACCCCGGCCGAGAGGTGCTTCATGTGGATTGGTGGATTTCGCTCGTCCGAGCTTCTCAAGCTTCTTGTGAGTCAATTGGAACCTCTGACGGAGCAACAGATGATTGACATCTGCAACCTGCAACAGTCGTCCCAACAGGCTGAAGACGCGCTGTCCCAAGGCATGGAGGCATTGCAGCAATCCTTAGCCGAGACATTGGCCAGCGGCTCCCCTGCATCTTCGGCCTCGTCGGGTAACGTAGCAAACTACATGGGCCAGATGGCCATGGCCATGGGAAAGTTAGGATCTCTCGAAGGCTTCCTACGTCAGACATCAACTTTTCAGGCTGATAATCTGCGGCAACAAACGCTCCAACAAATGCACCGTATTTTGACAATTAGGCAATCCGCCCGTGCTTTTTTGGCGATAAACGACTACTTTTCCCGACTCCGAGCTCTCAGTTCTCTCTGGCTGGCCAGACCGCGAGAGTGA 1074 49.07 MHLNPISTSVAQRESWEESNMVDASPRTDTSTDDTDEKNQRFERNQLIVGGGSDSNNTLREKSGDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISGSGDQSHSISGNGALAFDTEYSRWLEEHNRLVNELRTGVNSHVGDAELRIIVDDVTAHFDDIFRLKGIAAKTDVFHIFSGMWKTPAERCFMWIGGFRSSELLKLLVSQLEPLTEQQMIDICNLQQSSQQAEDALSQGMEALQQSLAETLASGSPASSASSGNVANYMGQMAMAMGKLGSLEGFLRQTSTFQADNLRQQTLQQMHRILTIRQSARAFLAINDYFSRLRALSSLWLARPRE 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30033852 30036718 - Bpe012984.1 Bpe03g01087 101592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01087 357 MobiDBLite consensus disorder prediction 29 43 - -
Bpe03g01087 357 Gene3D - 66 115 - -
Bpe03g01087 357 CDD bZIP_HBP1b-like 67 119 - -
Bpe03g01087 357 PANTHER TRANSCRIPTION FACTOR TGA2.3-LIKE ISOFORM X1 6 357 - -
Bpe03g01087 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 70 85 IPR004827 GO:0003700|GO:0006355
Bpe03g01087 357 MobiDBLite consensus disorder prediction 1 28 - -
Bpe03g01087 357 SMART brlzneu 63 126 IPR004827 GO:0003700|GO:0006355
Bpe03g01087 357 Pfam bZIP transcription factor 67 107 IPR004827 GO:0003700|GO:0006355
Bpe03g01087 357 Coils Coil 86 113 - -
Bpe03g01087 357 MobiDBLite consensus disorder prediction 1 68 - -
Bpe03g01087 357 ProSiteProfiles DOG1 domain profile. 132 354 IPR025422 GO:0006351|GO:0043565
Bpe03g01087 357 Pfam Seed dormancy control 150 225 IPR025422 GO:0006351|GO:0043565
Bpe03g01087 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 65 109 IPR004827 GO:0003700|GO:0006355
Bpe03g01087 357 PANTHER TRANSCRIPTION FACTOR TGA9 6 357 - -
Bpe03g01087 357 SUPERFAMILY Leucine zipper domain 67 110 IPR046347 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01087 Bpe04g01381 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01087 Bpe-Chr3:30033852 Bpe15g00992 Bpe-Chr15:19459390 4.10E-179 dispersed
Bpe04g00560 Bpe-Chr4:3545815 Bpe03g01087 Bpe-Chr3:30033852 1.35E-128 transposed
Bpe03g01087 Bpe-Chr3:30033852 Bpe04g01381 Bpe-Chr4:20448925 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21148 PF14144 DOG1 1.20E-29 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01087 K14431 - mnt:21386980 546.199