Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01097 ATGGCCTACGCTTGTGCTTCTTCTGCCATTACGGCCGTGGCCATATCTTCTTCTTCGTCTTCTTCCTCTCCCAGTTCGCAGAAGGGCTGCGCTTTTTTGTCGGGAATCAAATTGAGAGTGAAGAAGGGGAAGGCTGTTTGCAACTCTGCTGCAGCGAGATCCGTCGCTGTCTGCGCTGCGGCCGACCCGGAGAGGCCGTTGTGGTTCCCTGGCAGCACCCCCCCACCGTGGCTTGATGGCACTCTCCCCGGTGACTTTGGTTTTGATCCTCTTGGTCTAGGGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAAGCGGAGATAGTTCACTGCCGATGGGCGATGTTAGGCGCCGCCGGTATTTTCATCCCGGAGTTACTCACTAAGATCGGCGTCCTCGATACCCCATCGTGGTACACTGCGGGAGAGCTAAACTACTTCACCGACACGACCACCCTCTTTATAATCGAGCTCATTTTGATTGGATGGGCGGAGGGGAGAAGATGGGCCGACATCCTCAAGCCTGGAAGCGTCAACACCGACCCCATCTTCCCCAACAACAAGCTCACCGGCACTGACGTCGGCTACCCCGGCGGCCTCTGGTTCGACCCTCTCGGGTGGGGATCTGGATCGCCAGAGAAGATCAAGGAGTTAAGAACCAAGGAGATCAAGAACGGTAGACTGGCTATGTTGGCCGTGATGGGGGCGTGGTTCCAACACATCTACACGGGAACTGGCCCTATCGACAACCTCTTCGCCCACCTTTCCGATCCCGGCCACGCCACCGTTTTCGCTGCTTTCACGCCCAAGTGA 813 57.07 MAYACASSAITAVAISSSSSSSSPSSQKGCAFLSGIKLRVKKGKAVCNSAAARSVAVCAAADPERPLWFPGSTPPPWLDGTLPGDFGFDPLGLGSDPESLRWNQQAEIVHCRWAMLGAAGIFIPELLTKIGVLDTPSWYTAGELNYFTDTTTLFIIELILIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLSDPGHATVFAAFTPK 270
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 30131429 30132494 + Bpe012996.1 Bpe03g01097 101602
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01097 270 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 270 - -
Bpe03g01097 270 Pfam Chlorophyll A-B binding protein 74 240 IPR022796 -
Bpe03g01097 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 270 IPR001344 GO:0009765|GO:0016020
Bpe03g01097 270 SUPERFAMILY Chlorophyll a-b binding protein 60 268 - -
Bpe03g01097 270 Gene3D Chlorophyll a/b binding protein domain 75 260 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01097 Bpe-Chr3:30131429 Bpe12g00541 Bpe-Chr12:11278473 1.70E-74 dispersed
Bpe05g00414 Bpe-Chr5:18522313 Bpe03g01097 Bpe-Chr3:30131429 2.87E-34 dispersed
Bpe07g00339 Bpe-Chr7:2663016 Bpe03g01097 Bpe-Chr3:30131429 5.45E-34 dispersed
Bpe15g01065 Bpe-Chr15:19919108 Bpe03g01097 Bpe-Chr3:30131429 1.20E-44 wgd
Bpe03g01097 Bpe-Chr3:30131429 Bpe04g01392 Bpe-Chr4:20595917 5.32E-147 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01097 K08908 - csv:101214055 453.366