Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe03g01097 | ATGGCCTACGCTTGTGCTTCTTCTGCCATTACGGCCGTGGCCATATCTTCTTCTTCGTCTTCTTCCTCTCCCAGTTCGCAGAAGGGCTGCGCTTTTTTGTCGGGAATCAAATTGAGAGTGAAGAAGGGGAAGGCTGTTTGCAACTCTGCTGCAGCGAGATCCGTCGCTGTCTGCGCTGCGGCCGACCCGGAGAGGCCGTTGTGGTTCCCTGGCAGCACCCCCCCACCGTGGCTTGATGGCACTCTCCCCGGTGACTTTGGTTTTGATCCTCTTGGTCTAGGGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAAGCGGAGATAGTTCACTGCCGATGGGCGATGTTAGGCGCCGCCGGTATTTTCATCCCGGAGTTACTCACTAAGATCGGCGTCCTCGATACCCCATCGTGGTACACTGCGGGAGAGCTAAACTACTTCACCGACACGACCACCCTCTTTATAATCGAGCTCATTTTGATTGGATGGGCGGAGGGGAGAAGATGGGCCGACATCCTCAAGCCTGGAAGCGTCAACACCGACCCCATCTTCCCCAACAACAAGCTCACCGGCACTGACGTCGGCTACCCCGGCGGCCTCTGGTTCGACCCTCTCGGGTGGGGATCTGGATCGCCAGAGAAGATCAAGGAGTTAAGAACCAAGGAGATCAAGAACGGTAGACTGGCTATGTTGGCCGTGATGGGGGCGTGGTTCCAACACATCTACACGGGAACTGGCCCTATCGACAACCTCTTCGCCCACCTTTCCGATCCCGGCCACGCCACCGTTTTCGCTGCTTTCACGCCCAAGTGA | 813 | 57.07 | MAYACASSAITAVAISSSSSSSSPSSQKGCAFLSGIKLRVKKGKAVCNSAAARSVAVCAAADPERPLWFPGSTPPPWLDGTLPGDFGFDPLGLGSDPESLRWNQQAEIVHCRWAMLGAAGIFIPELLTKIGVLDTPSWYTAGELNYFTDTTTLFIIELILIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLSDPGHATVFAAFTPK | 270 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 30131429 | 30132494 | + | Bpe012996.1 | Bpe03g01097 | 101602 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe03g01097 | 270 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC | 1 | 270 | - | - | |
| Bpe03g01097 | 270 | Pfam | Chlorophyll A-B binding protein | 74 | 240 | IPR022796 | - | |
| Bpe03g01097 | 270 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 270 | IPR001344 | GO:0009765|GO:0016020 | |
| Bpe03g01097 | 270 | SUPERFAMILY | Chlorophyll a-b binding protein | 60 | 268 | - | - | |
| Bpe03g01097 | 270 | Gene3D | Chlorophyll a/b binding protein domain | 75 | 260 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe03g01097 | Bpe-Chr3:30131429 | Bpe12g00541 | Bpe-Chr12:11278473 | 1.70E-74 | dispersed | |
| Bpe05g00414 | Bpe-Chr5:18522313 | Bpe03g01097 | Bpe-Chr3:30131429 | 2.87E-34 | dispersed | |
| Bpe07g00339 | Bpe-Chr7:2663016 | Bpe03g01097 | Bpe-Chr3:30131429 | 5.45E-34 | dispersed | |
| Bpe15g01065 | Bpe-Chr15:19919108 | Bpe03g01097 | Bpe-Chr3:30131429 | 1.20E-44 | wgd | |
| Bpe03g01097 | Bpe-Chr3:30131429 | Bpe04g01392 | Bpe-Chr4:20595917 | 5.32E-147 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe03g01097 | K08908 | - | csv:101214055 | 453.366 |