Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01107 ATGGAGAAGTATTTGAAGGAGTTCGAGGTGGAGCCTAAGCATTCCTCCGAGGAAGTTTTGAGGAAGTGGAGGTCCGCTGTATCAGTCGTAAAAAATCCTGCGCGAAGGTTTCGAAATGTTGCGGATCTAGTCAAGCGTTCGGAGGCTGCGAAGAAAAAATTAATGATTCAGGAAAAAATTCGAGTTGCTCTTTTTGTACAGAAAGCAGCCTTGCAGTTCATCGATGCGGGTGGTCGAGCTGAATACATTCTCTCAGAGGAGACTAGAGAAGCAGGTTTTAATATTGATCCAGATGACCTTGCATCAATTGTCCGTGGCCATGATTTTAAGGGCTTTAGATCACATGGTGGAATTGAAGGGATTGCTAGGAGAGTCTCTGTTTCATTGAATACAGGTGTTAATGAGCAGGATGTACCTCTACGACAGAAAATTTATGGCCTTAACAGCTATATAGAAAAGCCTTCAAAACCATTTTTAAAGTTTTTTCTGGAAGCATTGCAGGACTTAACACTTATCATCCTCATGGTCTGTGCGGTAGTTTCCTTAGGCGTTGGAATTGGCACAGAAGGATTGCCAAACGGAATGTATGATGGCGTCGGGATCTTGTTTAGCGTTTTCTTGGTGGTCTTAGTTACCTCTATTAGCGACTACAAGCAGTCTTTGCAATTCAAAGAGCTGGATAGAGAGAAGAAAAAAATATTTGTTGATGTAAATAGAGATGGGTCACGAAAAAAGGTCTCCATTTATGATGTGGTGGTTGGAGACATTGTTCATTTATCAATTGGAGATCAAGTACCTGCAGATGGGATTTTTATATCAGGATACTCTTTGCTTATTGATGAATCAAGCTTATCTGGAGAGACTGAACCAGTGAACGTATATGAAGAGAAACCATTTCTTCTTTCAGGCACTAAAGTACAAGATGGTTCTGCGAAAATGCTGGTGACAGCTGTCGGGATGAGAACTGAATGGGGAAAGTTGATGGAAACTCTAAATGAGGTGGGAGAAGATGAGACTCCATTGCAGGTGAAGTTAAATGGTGTTGCTACGCTTATTGGAAAAATTGGTTTGGTCTTTGCTGTGGTAACATTTTTGGTGCTGATAGTGAGGTTTCTGGTTAAAAAATACTTTCAACACACGTTGGCAGATTGGTCTTCTAGTGATGCACTTCAGCTTCTAGATTTCTTTGCTATTGCTGTGACCATCGTTGTTGTCGCAATTCCGGAAGGATTACCGCTGGCAGTGACACTTAGTCTTGCGTTTGCAATGAAGAAATTAATGGATGAAAGAGCACTTGTGAGGCATCTCTCTGCATGTGAAACAATGGGTTCTGCTAGTAGCATTTGCACGGACAAGACTGGGACGTTGACAACCAATCATATGGTAGTAGATAAAATATGGATTTCTGGAAAATCTATTAGCATAAGACAGCAGGAGAGTAATGATGTTCTGGGATCAGAAATATCTGACGGTGCTATGAACATCCTTTTACAGTCTATCTTTCAAAATACAAGTTGTGAAGTGTCAAAAAATAAAGATGGGAAGAACTCCATCGTGGGAGGAACGCCGACAGAATCAGCCTTGTTAGAATTTGGCTTGTTTCTTGGTGGTGATTATGATGCCCAGCGGAGAGCGTTTAAAATACTTAAGATTGAACCGTTCAATTCTGTTAGGAAGAAGATGTCAGTGCTTGTGGCACTTCCTGATGGCGGAAGACGAGCTTTTTGCAAAGGGGCAGCAGAAATAATACTAAGAATGTGTGACAAGATTGTTGATGGCAATGGACATACTGTTCCCTTACCGAAAGAACAGGCAAGAACTGTGGCAGATGCAATCAATGGTTTTGCTTCTGAAGCATTAAGAACCCTTTGTTTGGCTTTCCAAGATATAGATGGAAACTCATTTCCAGAGGGTGGCTTCACATTGGTGGCTGTTGTTGGAATCAAGGACCCCGTACGACCTGGAGTCAAGGATGCTGTCAAAACTTGTTTGGATGCTGGAATAACTGTTCGAATGGTCACGGGTGACAATATACATACAGCTAAAGCCATAGCTAAGGAATGTGGAATCCTTACACCTAATGGTTTGGCCATAGAAGGACCAGATTTTCGTAGCTTGTCTCCTGACCGGATGAAGGAAATTATCCCAAAACTCCAGGTCATGGCTCGATCATTGCCGTTGGACAAGTATACCTTGGTCACCAGCCTGAGAAAGACATTTGGCGAGGTTGTTGCAGTGACAGGCGATGGGACAAATGATGCCCCAGCCTTGCATGAGTCAGATATTGGATTGGCTATGGGCATTGCTGGAACAGAGGTTGCCAAAGAAAATGCTGATGTCATCATAATGGACGATAATTTTTCAACTATAGTGAATGTAGCCAAATGGGGACGTTCTGTGTATATAAACATACAAAAATTTGTGCAGTTTCAGCTAACGGTCAACATTGTTGCCTTGCTGACCAATTTTGTTTCCGCATGCCTTTCTGGATCTGCTCCTCTTACTGCTGTGCAGTTGCTGTGGGTCAACTTAATTATGGACACTCTTGGTGCATTGGCACTTGCTACAGAGCCTCCTGATGATACATTAATGAAGAGACGCCCTGTAACTAAGGGTACGAGTTTCATTACCAAAGCCATGTGGAGGAACATTATTGGCCAAAGCATTTATCAACTAGCTGTTCTTGGTGTTCTTAATGTTGCTGGGAAGCGAATTCTACAGCTAGATGGCTATGGCGCCACTGATGTTTTGAATACTTTGATTTTCAACGCATTCGTCTTTTGTCAGGTGTTTAATGAAATAAACAGTCGTGAAATAGAGAAGATCAACATTTTCCGTGGCTTATTTAACAGCTGGATATTTATTACTATCGTTGTTTCAACAGCTGTTTTTCAAGTGATAATTATTGAATTTTTGGGTGATTTTGCCAGCACTGTACCACTCAACTGGAAATTTTGGGTACTAAGTATTGTGATTGGATTTGTTAGCATGCCGATTGGAGTAGTTTTGAAGTGCATTCCTGTTGAAAGAAATTCAACCAAGCATCATGATGGCTATGAAGCACTGCCTTCCGGTCCGGAACTGGCATGA 3090 41.84 MEKYLKEFEVEPKHSSEEVLRKWRSAVSVVKNPARRFRNVADLVKRSEAAKKKLMIQEKIRVALFVQKAALQFIDAGGRAEYILSEETREAGFNIDPDDLASIVRGHDFKGFRSHGGIEGIARRVSVSLNTGVNEQDVPLRQKIYGLNSYIEKPSKPFLKFFLEALQDLTLIILMVCAVVSLGVGIGTEGLPNGMYDGVGILFSVFLVVLVTSISDYKQSLQFKELDREKKKIFVDVNRDGSRKKVSIYDVVVGDIVHLSIGDQVPADGIFISGYSLLIDESSLSGETEPVNVYEEKPFLLSGTKVQDGSAKMLVTAVGMRTEWGKLMETLNEVGEDETPLQVKLNGVATLIGKIGLVFAVVTFLVLIVRFLVKKYFQHTLADWSSSDALQLLDFFAIAVTIVVVAIPEGLPLAVTLSLAFAMKKLMDERALVRHLSACETMGSASSICTDKTGTLTTNHMVVDKIWISGKSISIRQQESNDVLGSEISDGAMNILLQSIFQNTSCEVSKNKDGKNSIVGGTPTESALLEFGLFLGGDYDAQRRAFKILKIEPFNSVRKKMSVLVALPDGGRRAFCKGAAEIILRMCDKIVDGNGHTVPLPKEQARTVADAINGFASEALRTLCLAFQDIDGNSFPEGGFTLVAVVGIKDPVRPGVKDAVKTCLDAGITVRMVTGDNIHTAKAIAKECGILTPNGLAIEGPDFRSLSPDRMKEIIPKLQVMARSLPLDKYTLVTSLRKTFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVAKWGRSVYINIQKFVQFQLTVNIVALLTNFVSACLSGSAPLTAVQLLWVNLIMDTLGALALATEPPDDTLMKRRPVTKGTSFITKAMWRNIIGQSIYQLAVLGVLNVAGKRILQLDGYGATDVLNTLIFNAFVFCQVFNEINSREIEKINIFRGLFNSWIFITIVVSTAVFQVIIIEFLGDFASTVPLNWKFWVLSIVIGFVSMPIGVVLKCIPVERNSTKHHDGYEALPSGPELA 1029
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30189882 30195633 - Bpe013006.2 Bpe03g01107 101612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01107 1029 Pfam Ca2+-ATPase N terminal autoinhibitory domain 6 48 IPR024750 GO:0005516
Bpe03g01107 1029 Pfam haloacid dehalogenase-like hydrolase 448 760 - -
Bpe03g01107 1029 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 111 1009 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bpe03g01107 1029 Gene3D - 459 651 IPR023299 GO:0000166
Bpe03g01107 1029 Gene3D - 446 792 IPR023214 -
Bpe03g01107 1029 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Bpe03g01107 1029 PRINTS P-type cation-transporting ATPase superfamily signature 666 676 - -
Bpe03g01107 1029 PRINTS P-type cation-transporting ATPase superfamily signature 644 655 - -
Bpe03g01107 1029 PRINTS P-type cation-transporting ATPase superfamily signature 747 766 - -
Bpe03g01107 1029 PRINTS P-type cation-transporting ATPase superfamily signature 771 783 - -
Bpe03g01107 1029 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Bpe03g01107 1029 SUPERFAMILY Calcium ATPase, transmembrane domain M 115 1008 IPR023298 -
Bpe03g01107 1029 SFLD p-type atpase 431 799 IPR044492 -
Bpe03g01107 1029 PANTHER CALCIUM-TRANSPORTING ATPASE 6 1015 - -
Bpe03g01107 1029 SMART Cation_ATPase_N_a_2 114 186 IPR004014 -
Bpe03g01107 1029 Gene3D - 132 332 - -
Bpe03g01107 1029 SUPERFAMILY HAD-like 448 852 IPR036412 -
Bpe03g01107 1029 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 455 656 IPR023299 GO:0000166
Bpe03g01107 1029 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Bpe03g01107 1029 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 544 691 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe03g01107 1029 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 712 834 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe03g01107 1029 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 201 474 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe03g01107 1029 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe03g01107 1029 PRINTS H+-transporting ATPase (proton pump) signature 747 763 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe03g01107 1029 PRINTS H+-transporting ATPase (proton pump) signature 779 804 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bpe03g01107 1029 Coils Coil 1028 1029 - -
Bpe03g01107 1029 Pfam E1-E2 ATPase 235 427 - -
Bpe03g01107 1029 Gene3D - 15 76 - -
Bpe03g01107 1029 Gene3D - 164 1005 - -
Bpe03g01107 1029 CDD P-type_ATPase_Ca_PMCA-like 141 880 - -
Bpe03g01107 1029 Pfam Cation transporting ATPase, C-terminus 832 1005 IPR006068 -
Bpe03g01107 1029 SFLD C1.7: P-type atpase like 431 799 - -
Bpe03g01107 1029 Pfam Cation transporter/ATPase, N-terminus 115 181 IPR004014 -
Bpe03g01107 1029 PANTHER CATION TRANSPORTING ATPASE 6 1015 - -
Bpe03g01107 1029 SUPERFAMILY Calcium ATPase, transduction domain A 234 330 IPR008250 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01107 Bpe04g01408 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00452 Bpe-Chr2:2956560 Bpe03g01107 Bpe-Chr3:30189882 0 dispersed
Bpe03g01107 Bpe-Chr3:30189882 Bpe04g00158 Bpe-Chr4:1026710 0 dispersed
Bpe04g00812 Bpe-Chr4:5343498 Bpe03g01107 Bpe-Chr3:30189882 0 transposed
Bpe09g00633 Bpe-Chr9:14991779 Bpe03g01107 Bpe-Chr3:30189882 0 transposed
Bpe10g00386 Bpe-Chr10:11439756 Bpe03g01107 Bpe-Chr3:30189882 0 transposed
Bpe11g01000 Bpe-Chr11:7438227 Bpe03g01107 Bpe-Chr3:30189882 1.91E-103 transposed
Bpe12g00183 Bpe-Chr12:1383135 Bpe03g01107 Bpe-Chr3:30189882 1.37E-107 transposed
Bpe13g01096 Bpe-Chr13:16486021 Bpe03g01107 Bpe-Chr3:30189882 0 transposed
Bpe03g01107 Bpe-Chr3:30189882 Bpe04g01408 Bpe-Chr4:20754463 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01107 K01537 - jre:109010491 1585.08