Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01146 ATGGAAGCGATGCAAATAGATTTGGAGCAAAATCTTCAGCGACTGCAATCTTCGTACAGATCCTTGGACGAGAAATATGATATTCAGAAGGAGGAGTACAGGGGTCAGCAGTACAGTCAGATTTACTTTGCGCGTCTCCAGCTTATGAGAGCGCTCCTTTCTTCCCTTGTTCCTAACTGGAAACCCCATCTGCCTGTCTGCACTGTGCTGGAGTTGGAAGATGGCAAGGAATGCATCATAGTTGGAACCATTTACAAGCACATGAAACTCAAGCCCACAATTCTGCACGAGTATTCAAAAGAGAGATCAGTCACTCCATTGGTTAAGCCACATAACTTTATGCACCCTGATGATCACCTAGTTTTGGAAGATGAAAGTGGAAGAGTGAAGCTTTCTGGAACAATGATTTCACCATCGACGTTTGTAACAGCAGGCATTGTTGTTGCTTTGCATGGAAAGGAAACTTCTGCTGGTGACTTTTTGGTATTAGATGTCTTAGAAGCCGGACTACCATCTCAGAGGGAGATGCCTCATATGTTAAGGGAAGACAAGTATGTTGTCATTCTGTCAGGGCTAAGCATTGGTAGTAGCACTTCTAACCCCTTGCAGTTTCAGCTTCTTGTTGATCATTTAACTGGGCATTTAGGAGATGAGAAGGAACAAGGTATTGCAGCAAAAATAGTTCGGCTTGTTATTGCTGGAAATTCTGTTGAAATATCTCGTGGGCTTCTTAATGGACAGAATTTGGCTAGTAAAGATCAGTCAAGGCTGTCTGAGCCTATCACCGAACTGGATATCTTGTTAACTCAGCTTGTTGCTGGTTTACCTGTGGACATCATGCCTGGTGCAAATGATCCGGCTAACTTTTCTTTACCTCAGCAGCCACTGCATAAATGCCTTTTCCCTGGATCGTCAGCTTATAACACTTTTAGATCCTGTACAAATCCTCATTCCTTCGAGATTGATAATATCAGTTTTCTTGGAACATCAGGTCAAAACATAGACGATCTCGCAAAATACTCAGAGGCAAAGGATAAAGTTGAATTTATGGAGAGGACATTGAATTGGAGGCATCTGGCTCCCACTGCTCCAAATACTCTTGGCTGTTATCCTTTCACGGATAAGGATCCTTTCCTGATTGAGGATTGTCCTCATGTTTATTTCGTAGGCAATCAAGATACCTATGATACTCGCCTAATTGAAGGGCATGAGGGTCAGATGGTCAGACTCATTTGTGTTCCAAAATTCTGCGAAACAGGCGTTGCTGTTATGGTAAACTTACGAAATCTCGAATGCCATACTCTCAGTTTTCGGACCGATTTCAACTAG 1329 42.81 MEAMQIDLEQNLQRLQSSYRSLDEKYDIQKEEYRGQQYSQIYFARLQLMRALLSSLVPNWKPHLPVCTVLELEDGKECIIVGTIYKHMKLKPTILHEYSKERSVTPLVKPHNFMHPDDHLVLEDESGRVKLSGTMISPSTFVTAGIVVALHGKETSAGDFLVLDVLEAGLPSQREMPHMLREDKYVVILSGLSIGSSTSNPLQFQLLVDHLTGHLGDEKEQGIAAKIVRLVIAGNSVEISRGLLNGQNLASKDQSRLSEPITELDILLTQLVAGLPVDIMPGANDPANFSLPQQPLHKCLFPGSSAYNTFRSCTNPHSFEIDNISFLGTSGQNIDDLAKYSEAKDKVEFMERTLNWRHLAPTAPNTLGCYPFTDKDPFLIEDCPHVYFVGNQDTYDTRLIEGHEGQMVRLICVPKFCETGVAVMVNLRNLECHTLSFRTDFN 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30466785 30470861 + Bpe013042.1 Bpe03g01146 101651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01146 442 Pfam DNA polymerase alpha/epsilon subunit B 186 395 IPR007185 GO:0003677|GO:0006260
Bpe03g01146 442 CDD MPP_PolD2_C 185 437 IPR041863 -
Bpe03g01146 442 Coils Coil 5 32 - -
Bpe03g01146 442 Pfam DNA polymerase delta subunit OB-fold domain 37 165 IPR040663 -
Bpe03g01146 442 Gene3D - 44 168 - -
Bpe03g01146 442 Gene3D - 172 441 - -
Bpe03g01146 442 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 9 438 IPR024826 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01146 K02328 - vvi:100241865 738.028