Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01148 ATGGTTGGTATGGGCCAAAAGGATGCTTATGTTGGTGATGAGGCTCAGTCGAAGAGAGGTATTTTGACATTAAAATACCCAATTGAGCATGGCATTGTTAGCAACTGGGATGACATGGCAAAAATCTGGCACCACACTTTTTATAAAGAGCGTCGTGTGGCTCCGGAAGAGCATCCAGTTCTACTCACAGAAGCCCCTCTTAACCCCAAGGCTAATCGTGAGAAGATGGCACAAATTATGTTTGAGACCTTCAATACTCTCGCAATGTATGTTGCCATCCAGGCTGTCCTTTCCCTTTATGCTAGTGGCCGTACGACTGATGGTGTCAGCCATACTTCCCTTCCACATGCCATCCTTCGTTTGGACCTCGCAGGCCGAGATCTCACTGAAGCCCTAATGAAAATCTTGACTGAACGGGGTTACTCTTTCACCAGCACTGCCGAGCGTGAAATTGTTAGAGATGTGAAAGAGAAATTAGCTTACATTGCTCTTGACTACGAACAAGAGCTTGAAACATCGAAAACCAGTTCTTTGGTAGAGATTGGTGCTGAAAGATTCAGATCCCCTGAAGTACTCTTCCAGCCATCAATGATCAGAATGGAAGCTGCTGGCATATACAACACAATCATGAAGTGCGACCATATTAGGAAGGATCTCTATGGCAATATCGTGCTCAGCAATATCGTGCTCAGCGGGGGTTCTACTATGTTCCCTGGTATTGCTGATAGGATGAGCAAGGAAATTACAGCATTATCTCCGAGCAGCATGAGGATTAAGGTTTCATTATTGATATGA 795 44.91 MVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMAKIWHHTFYKERRVAPEEHPVLLTEAPLNPKANREKMAQIMFETFNTLAMYVAIQAVLSLYASGRTTDGVSHTSLPHAILRLDLAGRDLTEALMKILTERGYSFTSTAEREIVRDVKEKLAYIALDYEQELETSKTSSLVEIGAERFRSPEVLFQPSMIRMEAAGIYNTIMKCDHIRKDLYGNIVLSNIVLSGGSTMFPGIADRMSKEITALSPSSMRIKVSLLI 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30472524 30473871 - Bpe013044.1 Bpe03g01148 101653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01148 264 Gene3D - 95 260 - -
Bpe03g01148 264 Gene3D - 2 94 - -
Bpe03g01148 264 CDD NBD_sugar-kinase_HSP70_actin 31 108 - -
Bpe03g01148 264 SUPERFAMILY Actin-like ATPase domain 1 106 IPR043129 -
Bpe03g01148 264 PRINTS Actin signature 72 85 IPR004000 -
Bpe03g01148 264 PRINTS Actin signature 97 116 IPR004000 -
Bpe03g01148 264 PRINTS Actin signature 6 17 IPR004000 -
Bpe03g01148 264 PRINTS Actin signature 18 40 IPR004000 -
Bpe03g01148 264 ProSitePatterns Actins signature 1. 10 20 IPR004001 -
Bpe03g01148 264 SMART actin_3 1 264 IPR004000 -
Bpe03g01148 264 ProSitePatterns Actins and actin-related proteins signature. 61 73 IPR020902 -
Bpe03g01148 264 Gene3D Actin; Chain A, domain 4 123 202 - -
Bpe03g01148 264 PANTHER ACTIN 1 260 IPR004000 -
Bpe03g01148 264 PANTHER ACTIN 3 1 260 - -
Bpe03g01148 264 SUPERFAMILY Actin-like ATPase domain 112 262 IPR043129 -
Bpe03g01148 264 Pfam Actin 7 260 IPR004000 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01148 Bpe04g01456 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01148 Bpe-Chr3:30472524 Bpe08g00106 Bpe-Chr8:572280 3.74E-164 dispersed
Bpe03g01148 Bpe-Chr3:30472524 Bpe04g01456 Bpe-Chr4:21189952 3.62E-164 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01148 K10355 - gmx:100811630 434.491