Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe03g01152 | ATGGAGCTCGCTCTCAGCCTCAAACCTTTCTCCTTCCTCGGTAAAACCCCGAAAATCAACGAAGATTTGGGGTTTTGCATGGGGTTAGGGTGTGGGAGTGGCTTCTCTGGAACTGAAGAAGAGAAAATGGAGGCCGACAATGGTGGGGCTTCGGATCCGCCTCTCCAGCTTCGTCTTCTTCCTTCTGCTCCTGTTCCTCGTCGGATTCCTTTCCCTTGGCTTAACGATCACATGATATCTGAACCAGGATCTTCGGATGAGTCGGGAAGAGCTCTAGACGTGAATCAGCCACCAGCAGCGACGTCTGCGGCGGAGGACGGCAACTATAGGGCGGCTCTATCGTCTCCAAATAGCGCCGTTTCTTCATTTCCCGTGATCGGAAAAGGCGGATCGGCTGGAAGAAGCAAGAGGGTGTTGGAAATGGAAACCGAAAGAACGACCTCTAGAGCGAGCGACGAAGAAGACAATGGCCTGTGTAGAAAAAAGCTCCGGTTGTCCAAAGAGCAGTCGGCTTTTCTCGAAGAAAGCTTCAAAGAGCACAGTACTTTAAATCCTAAGCAAAAGCTCGGTCTAGCTAAAAGGTTGAACCTACGTCCTCGCCAAGTAGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAAGTGGATTGCGAATATTTAAAGAGATGTTGCGAGAAATTGACGGAAGAGAACAGAAGATTGCAGAAGGAACTTCGAGATCTCAGAGCCTTGAAAGCATCCCACCCTTTCTGCCTGCAACTTCCGGCCACCACTCTCACCATGTGCTCCTCCTGCGAGCGAGGTCGCCTCCACCGCCACTAA | 837 | 50.78 | MELALSLKPFSFLGKTPKINEDLGFCMGLGCGSGFSGTEEEKMEADNGGASDPPLQLRLLPSAPVPRRIPFPWLNDHMISEPGSSDESGRALDVNQPPAATSAAEDGNYRAALSSPNSAVSSFPVIGKGGSAGRSKRVLEMETERTTSRASDEEDNGLCRKKLRLSKEQSAFLEESFKEHSTLNPKQKLGLAKRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCEKLTEENRRLQKELRDLRALKASHPFCLQLPATTLTMCSSCERGRLHRH | 278 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 30572530 | 30573674 | + | Bpe013050.1 | Bpe03g01152 | 101657 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe03g01152 | 278 | Coils | Coil | 222 | 252 | - | - | |
| Bpe03g01152 | 278 | MobiDBLite | consensus disorder prediction | 135 | 155 | - | - | |
| Bpe03g01152 | 278 | SMART | HOX_1 | 158 | 220 | IPR001356 | GO:0003677 | |
| Bpe03g01152 | 278 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 40 | 272 | - | - | |
| Bpe03g01152 | 278 | MobiDBLite | consensus disorder prediction | 78 | 155 | - | - | |
| Bpe03g01152 | 278 | SUPERFAMILY | Homeodomain-like | 160 | 225 | IPR009057 | - | |
| Bpe03g01152 | 278 | Pfam | HD-ZIP protein N terminus | 43 | 128 | IPR006712 | GO:0005634 | |
| Bpe03g01152 | 278 | CDD | homeodomain | 160 | 217 | IPR001356 | GO:0003677 | |
| Bpe03g01152 | 278 | Pfam | Homeodomain | 160 | 214 | IPR001356 | GO:0003677 | |
| Bpe03g01152 | 278 | ProSiteProfiles | 'Homeobox' domain profile. | 160 | 216 | IPR001356 | GO:0003677 | |
| Bpe03g01152 | 278 | SMART | halz | 216 | 259 | IPR003106 | GO:0006355|GO:0043565 | |
| Bpe03g01152 | 278 | Pfam | Homeobox associated leucine zipper | 216 | 250 | IPR003106 | GO:0006355|GO:0043565 | |
| Bpe03g01152 | 278 | PANTHER | - | 40 | 272 | - | - | |
| Bpe03g01152 | 278 | ProSitePatterns | 'Homeobox' domain signature. | 191 | 214 | IPR017970 | GO:0000981|GO:0006355 | |
| Bpe03g01152 | 278 | Gene3D | - | 164 | 214 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Bpe03g01152 | Bpe04g01452 | BCT |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe03g01152 | Bpe-Chr3:30572530 | Bpe06g00652 | Bpe-Chr6:17223437 | 1.08E-92 | dispersed | |
| Bpe03g01152 | Bpe-Chr3:30572530 | Bpe04g01452 | Bpe-Chr4:21149666 | 2.87E-140 | wgd |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 21156 | PF04618 | HD-ZIP_N | 9.90E-07 | No_clan | Bpe | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe03g01152 | K09338 | - | qsu:112028347 | 367.081 |