Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01152 ATGGAGCTCGCTCTCAGCCTCAAACCTTTCTCCTTCCTCGGTAAAACCCCGAAAATCAACGAAGATTTGGGGTTTTGCATGGGGTTAGGGTGTGGGAGTGGCTTCTCTGGAACTGAAGAAGAGAAAATGGAGGCCGACAATGGTGGGGCTTCGGATCCGCCTCTCCAGCTTCGTCTTCTTCCTTCTGCTCCTGTTCCTCGTCGGATTCCTTTCCCTTGGCTTAACGATCACATGATATCTGAACCAGGATCTTCGGATGAGTCGGGAAGAGCTCTAGACGTGAATCAGCCACCAGCAGCGACGTCTGCGGCGGAGGACGGCAACTATAGGGCGGCTCTATCGTCTCCAAATAGCGCCGTTTCTTCATTTCCCGTGATCGGAAAAGGCGGATCGGCTGGAAGAAGCAAGAGGGTGTTGGAAATGGAAACCGAAAGAACGACCTCTAGAGCGAGCGACGAAGAAGACAATGGCCTGTGTAGAAAAAAGCTCCGGTTGTCCAAAGAGCAGTCGGCTTTTCTCGAAGAAAGCTTCAAAGAGCACAGTACTTTAAATCCTAAGCAAAAGCTCGGTCTAGCTAAAAGGTTGAACCTACGTCCTCGCCAAGTAGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACGAAGTTGAAGCAGACAGAAGTGGATTGCGAATATTTAAAGAGATGTTGCGAGAAATTGACGGAAGAGAACAGAAGATTGCAGAAGGAACTTCGAGATCTCAGAGCCTTGAAAGCATCCCACCCTTTCTGCCTGCAACTTCCGGCCACCACTCTCACCATGTGCTCCTCCTGCGAGCGAGGTCGCCTCCACCGCCACTAA 837 50.78 MELALSLKPFSFLGKTPKINEDLGFCMGLGCGSGFSGTEEEKMEADNGGASDPPLQLRLLPSAPVPRRIPFPWLNDHMISEPGSSDESGRALDVNQPPAATSAAEDGNYRAALSSPNSAVSSFPVIGKGGSAGRSKRVLEMETERTTSRASDEEDNGLCRKKLRLSKEQSAFLEESFKEHSTLNPKQKLGLAKRLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCEKLTEENRRLQKELRDLRALKASHPFCLQLPATTLTMCSSCERGRLHRH 278
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 30572530 30573674 + Bpe013050.1 Bpe03g01152 101657
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01152 278 Coils Coil 222 252 - -
Bpe03g01152 278 MobiDBLite consensus disorder prediction 135 155 - -
Bpe03g01152 278 SMART HOX_1 158 220 IPR001356 GO:0003677
Bpe03g01152 278 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 40 272 - -
Bpe03g01152 278 MobiDBLite consensus disorder prediction 78 155 - -
Bpe03g01152 278 SUPERFAMILY Homeodomain-like 160 225 IPR009057 -
Bpe03g01152 278 Pfam HD-ZIP protein N terminus 43 128 IPR006712 GO:0005634
Bpe03g01152 278 CDD homeodomain 160 217 IPR001356 GO:0003677
Bpe03g01152 278 Pfam Homeodomain 160 214 IPR001356 GO:0003677
Bpe03g01152 278 ProSiteProfiles 'Homeobox' domain profile. 160 216 IPR001356 GO:0003677
Bpe03g01152 278 SMART halz 216 259 IPR003106 GO:0006355|GO:0043565
Bpe03g01152 278 Pfam Homeobox associated leucine zipper 216 250 IPR003106 GO:0006355|GO:0043565
Bpe03g01152 278 PANTHER - 40 272 - -
Bpe03g01152 278 ProSitePatterns 'Homeobox' domain signature. 191 214 IPR017970 GO:0000981|GO:0006355
Bpe03g01152 278 Gene3D - 164 214 - -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Bpe03g01152 Bpe04g01452 BCT
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01152 Bpe-Chr3:30572530 Bpe06g00652 Bpe-Chr6:17223437 1.08E-92 dispersed
Bpe03g01152 Bpe-Chr3:30572530 Bpe04g01452 Bpe-Chr4:21149666 2.87E-140 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21156 PF04618 HD-ZIP_N 9.90E-07 No_clan Bpe TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01152 K09338 - qsu:112028347 367.081