Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01169 GGAGATGATTCTAACGAAGAGGAAAGTGATTATGATGATGAGGAGATTGATAATGGGGATGTGGGTGAAGCTACGACAGATGCCCCTGGACAGAGATATCTGCAGACAAATGCCAGCGACAACGATGATCCTGATGAACAAAACCGTGTAATCAGGTCAGCAAAAGATAAGCGTTTTTATGAGATGTCTGCCACTTTCGACCAGATGAAGAATGCTATGAAGATCAATGATTGGGTATGCTTACAGGAGAATTTTGATAAGATAAATAAACAGCTTGAGAAAGTCATGCAGGTCACTGAGTTGGAAAAGATCCCCTTCCTTTACATCAAAGCACTTGTCATGCTGGAAGACTTTCTGAACCAGCCCTTGACAAACAAGGGAGCTAAGAAAAAGATGAGTAGCAGTAATGCTAAGGCCTTGAATGCGATGAAACAGAAGCTAAAGAAGAACAACAAGCAATATGAAGAAGCTATCAACAAGTACAGGGAGAATCCTATTAGTGAGGAGGAAAAAGATGAAGAGGAGACAGATGAGGAGGACAGGCTGGAACGACCAAGACAGATGCCATACCACATGCACATAAACCTGGAGCTCCTTGAGGCGGTTCATCTCATATGTGCTGTTAAGACTTTCCAGCAATTTCTCGAGGTCAGTGAGAGGCAGACATTCACCGGTCCTCGTGAAAATGTCAGAGATTATGTAATGGCTGCCACTAGGACCCTTAGTAAGGGAGACTTTCAATGCACATTTGACACAATCTCATCCCTTGATGTGTGGAAACTCCTTCGGAATATGCTAAAGGCTAAGATCAAGGAAGAAGCCTTGAGGACTTACCTCTTCACCTACTCTTCCTCTTATGATTCTCTTAGTCTGACCCAGCTCACCAAAATGTTTAACCTCACGGAGGTTCAGGTGCACAGTATTGTCAGCAAGATGATGATCAATGAGGAGCTTCATGTAAGCTGGGATCAGCCTAGTGGCTGTATTGTTTTTCAAAATGCTGAATATTCTAGATTGCCTGCCATTGCATTCCAATTAGCGGATAAGTTGTCGATCCTGGTGGAAAGCAATGAGAGGGCAATTGAGACCCGAATTGGAGGAGGTGGATTGGATTTACAGTTCCAGTGTAGGGACGGTCTAGACTATGTGGCGGCAGCAGCTTCTGGTAACAGGTGGCAAGAGAACCACTCTTTCAATCTAGGAAAGCAAAGTGTCAGGGGATCCCAAATGGACGCATCGGCTTGCATGGTTAGTCTCAACAAAGGAGTTCGAGGTTAG 1278 44.37 GDDSNEEESDYDDEEIDNGDVGEATTDAPGQRYLQTNASDNDDPDEQNRVIRSAKDKRFYEMSATFDQMKNAMKINDWVCLQENFDKINKQLEKVMQVTELEKIPFLYIKALVMLEDFLNQPLTNKGAKKKMSSSNAKALNAMKQKLKKNNKQYEEAINKYRENPISEEEKDEEETDEEDRLERPRQMPYHMHINLELLEAVHLICAVKTFQQFLEVSERQTFTGPRENVRDYVMAATRTLSKGDFQCTFDTISSLDVWKLLRNMLKAKIKEEALRTYLFTYSSSYDSLSLTQLTKMFNLTEVQVHSIVSKMMINEELHVSWDQPSGCIVFQNAEYSRLPAIAFQLADKLSILVESNERAIETRIGGGGLDLQFQCRDGLDYVAAAASGNRWQENHSFNLGKQSVRGSQMDASACMVSLNKGVRG 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30663968 30667120 + Bpe013065.2 Bpe03g01169 101674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01169 425 Coils Coil 137 164 - -
Bpe03g01169 425 MobiDBLite consensus disorder prediction 1 47 - -
Bpe03g01169 425 MobiDBLite consensus disorder prediction 160 186 - -
Bpe03g01169 425 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 36 180 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bpe03g01169 425 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 265 353 - -
Bpe03g01169 425 ProSiteProfiles PCI domain profile. 174 336 IPR000717 -
Bpe03g01169 425 Gene3D - 269 338 IPR036388 -
Bpe03g01169 425 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 4 180 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bpe03g01169 425 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 209 410 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bpe03g01169 425 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 173 208 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bpe03g01169 425 SMART PINT_4 265 353 IPR000717 -
Bpe03g01169 425 SUPERFAMILY Winged helix DNA-binding domain 270 334 IPR036390 -
Bpe03g01169 425 MobiDBLite consensus disorder prediction 1 21 - -
Bpe03g01169 425 Pfam PCI domain 210 332 IPR000717 -
Bpe03g01169 425 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 209 410 - -
Bpe03g01169 425 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 173 208 - -
Bpe03g01169 425 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 4 180 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01169 Bpe-Chr3:30663968 Bpe03g01173 Bpe-Chr3:30687936 1.62E-80 proximal
Bpe03g01169 Bpe-Chr3:30663968 Bpe04g01437 Bpe-Chr4:21006203 1.69E-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01169 K03252 - pvy:116132675 318.546