Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01173 GATTCTGAGGAAGATGAAAGTGATTATGATGAGGAGGAGATTGATAATGGGGATGTGGGTGAAGCTACGACAGATGCCCCTGGGCAAAGATATCTGCAGACAAATGCCAGTGACAGCGATGATCCTGATGAACAAAAACGTGTAATCAGATCAGCAAAAGATAAGCGTTTTGATGAGATGTCTGCCACTGTCGACCAGATGAAGAATGCTATGAAGATCAATGATTGGGTGTGCTTACAGGAGAATTTTGATAAGATAAATAAACAGCTCGAGAAAGTGATGCGGGTCATTGAGTCGGAAAAGATCCCCTTCCTTTACATCAAAGCACTTGTCATGCTGGAAGACTTTCTGAACCAGGCCTTGACAAACAAGGAAGCTAAGAAAAAGATGAGTAGCAGTAATGCTAAGGCCTTGAATGCGATGAAACAGAAGCTAAAGAAGAACAACAAGCAATATGAAGAAGCTATCAACAAGTACAGGGAGAATCCTATTAGTGAGGAGGAAAAAGATGAAGAGGAGACAGATGAGGAGACAGAGACAGATACAGATTTTGATGAAGATCCTACTAAATTGGTAGAGTCAGGATCTGAAGATGAAGAGAATGACGAAGATGTTGATGAAGGCCCAGATGATCGTGATGGGGCTTGGGAGAAGAAGATGAGCAAGAAAGATAAGCTCATGGACAAGCAGTTTAAGAATCCACGTGAGATTACATGGGATACAGTGAACAAGAAGTTTAAGGAGGTAGTGGCCGCACGTGGTAGAAAAGGAACTGGAAGGTTTGAGCAGGTGGAGCAGCTAACATTCTTGACAAAAGTTGCTAAGACCCCTGCACAAAAGCTTGAAATCCTTTTCAGTGTTGTTGCTGCTCAGTTTGATGTCAATCCAGGGCTTACAGGACACATGCCAATAAATGTTTGGAAGAAATGTGTGCAGAATATGGTTGTTATCCTTGATATTCTTGTGCACAATCCCAATATTGTGGTGGATGAAGTTGGCGGAATTGATGAGAATGAAAGCCAAAAAGGATCAAACTATAGTGGAAAAATACGAGTGTGGGGAAATTTAGTGGCTTTCTTAGAAAGAATAGATTCCGAGTTTTTCAAGAGTTTACAGTGCATTGATCCACACACTCGTGAGTATGTTGAGAGACTCAGAGATGAACCACTCCTTTCGGTACTTGCTCAAAATGTGCAGGAATATTTAGAAAGGATTGAAGATTTTAAGGCATCTGCAAAAGTCTCACTGAGACGGGTTGAGCTTATTTATTACAAACCCCAGGAAGTTTATGATGCCATGAAGAAGTTGGCTGAACAGACGGATAACGAAGATATTGGAGAAGCTGACAGTGAGCCTGTCATTGAAGAAACTAGAGGCCCTTCTCCATTTATTGTGACACCTGAGCTAGTACCTCGAAAACCCACTTTTCCAGAGAGCAGCCGGACTTTGATGGATACTCTGGTGAGTCTGATATACAAGTATGGAGATGAGAGGACCAAAGCACGAGCAATGCTTTGTGATATCTACCACCATGCCCTCTTGGATGAATTTTCTATTGCTCGGGATTTGCTGCTTATGAGTCATTTACAGGACAGTATTCAGCTCATGGACATTTCAACTCAGATTCTTTATAACAGGAGTATGGCTCAACTTGGGCTCTGCGCTTTTAGGGCTGGGCTGATCAGTGAAGGACATGGGTGCCTTTCAGAATTATATTCAGGTGGAAGGGTAAAAGAGTTATTAGCTCAAGGCATCTCTCAAAGCCGATATCAAGAAAAGACTCCAGAACAGGAAAGGCTGGAACGACGACGACAGATGCCATACCACATGCACATAAACCTGGAGCTCCTTGAGGCGGTTCATCTCATATGTGCCATGTTGCTGGAAGTCCCCAATTTGGCGTCTAACAACCATGAAGTGAAGCGGAAGGTCATCAGTAAGACTTTCCGGCGATTTCTCGAGGTCAGTGAGAGGCAGACATTCACCGGTCCTCCTGAAAATGTCAGAGATCATGTAATGGCTGCCACTAGGACTCTTAGTAAGGGAGACTTTCAAAGCACATTTGACACAATCTCATCCCTTGATGTGTGGAAAGTCCTTCGGAATCAAGAAGTCGTTCTTGAGATGCTAAAGGCTAAGATCAAGGAAGAAGCCTTGAGGACTTACCTCTTCACCTACTCTTCCTCTTATGATTCTCTTAGTCTGACCCAGCTCACCAAAATGTTTGACCTCACGGAGGTTCAGGTGCACAGTATTGTCAGCAAGATGATGATCAATGAGGAGCTGCACGCAAGCTGGGATCAGCCTAGTGGCTGTATTGTTTTCCAAAATGTTGAATATTCTAGATTGCATGCCCTTGCATTCCAATTAGTGGATAAGTTGTCGTCAATCCTGGTAGAAAGCAACGAGAGGGCAATTGAGACCCCACTTGGAGGAGGTGGATTAGATTTGCAGTTCCGGCGTAGGGACGGTCAAGACTATGCGGCAGCAGCAGCTACTGGTAACAGGTGGCAAGAGAACCACTCTTTCAATCTAGGAAAGCAAAGTGGTAGAAATGCATACGGGGGAGTTAGAGCATTGACATATAGCCGAGGGGGAGGAGTTCGAAATTCAAGGGATGGCACTACAGGTCAATTACGCAGCAATCAGGGCTCTCGTTATCAGACTAGTTCATCAGCGAGGGGATCCCAAATGGACGCATTGGCTCACATGGTTAGTCTCAACAAAGGAGTCCGAGGTTAG 2742 44.13 DSEEDESDYDEEEIDNGDVGEATTDAPGQRYLQTNASDSDDPDEQKRVIRSAKDKRFDEMSATVDQMKNAMKINDWVCLQENFDKINKQLEKVMRVIESEKIPFLYIKALVMLEDFLNQALTNKEAKKKMSSSNAKALNAMKQKLKKNNKQYEEAINKYRENPISEEEKDEEETDEETETDTDFDEDPTKLVESGSEDEENDEDVDEGPDDRDGAWEKKMSKKDKLMDKQFKNPREITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVVAAQFDVNPGLTGHMPINVWKKCVQNMVVILDILVHNPNIVVDEVGGIDENESQKGSNYSGKIRVWGNLVAFLERIDSEFFKSLQCIDPHTREYVERLRDEPLLSVLAQNVQEYLERIEDFKASAKVSLRRVELIYYKPQEVYDAMKKLAEQTDNEDIGEADSEPVIEETRGPSPFIVTPELVPRKPTFPESSRTLMDTLVSLIYKYGDERTKARAMLCDIYHHALLDEFSIARDLLLMSHLQDSIQLMDISTQILYNRSMAQLGLCAFRAGLISEGHGCLSELYSGGRVKELLAQGISQSRYQEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNLASNNHEVKRKVISKTFRRFLEVSERQTFTGPPENVRDHVMAATRTLSKGDFQSTFDTISSLDVWKVLRNQEVVLEMLKAKIKEEALRTYLFTYSSSYDSLSLTQLTKMFDLTEVQVHSIVSKMMINEELHASWDQPSGCIVFQNVEYSRLHALAFQLVDKLSSILVESNERAIETPLGGGGLDLQFRRRDGQDYAAAAATGNRWQENHSFNLGKQSGRNAYGGVRALTYSRGGGVRNSRDGTTGQLRSNQGSRYQTSSSARGSQMDALAHMVSLNKGVRG 913
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30687936 30691124 + Bpe013069.1 Bpe03g01173 101678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01173 913 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 709 797 - -
Bpe03g01173 913 Coils Coil 391 411 - -
Bpe03g01173 913 MobiDBLite consensus disorder prediction 868 896 - -
Bpe03g01173 913 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 1 877 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bpe03g01173 913 SUPERFAMILY Winged helix DNA-binding domain 708 778 IPR036390 -
Bpe03g01173 913 Pfam PCI domain 648 776 IPR000717 -
Bpe03g01173 913 SMART PINT_4 709 797 IPR000717 -
Bpe03g01173 913 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 3 912 - -
Bpe03g01173 913 MobiDBLite consensus disorder prediction 166 184 - -
Bpe03g01173 913 MobiDBLite consensus disorder prediction 37 54 - -
Bpe03g01173 913 MobiDBLite consensus disorder prediction 1 19 - -
Bpe03g01173 913 Coils Coil 135 162 - -
Bpe03g01173 913 MobiDBLite consensus disorder prediction 157 229 - -
Bpe03g01173 913 MobiDBLite consensus disorder prediction 196 210 - -
Bpe03g01173 913 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 36 639 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Bpe03g01173 913 MobiDBLite consensus disorder prediction 211 229 - -
Bpe03g01173 913 MobiDBLite consensus disorder prediction 1 54 - -
Bpe03g01173 913 MobiDBLite consensus disorder prediction 865 896 - -
Bpe03g01173 913 Gene3D - 714 782 IPR036388 -
Bpe03g01173 913 ProSiteProfiles PCI domain profile. 608 780 IPR000717 -
Bpe03g01173 913 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 3 912 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01173 Bpe04g01437 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01173 Bpe-Chr3:30687936 Bpe04g01437 Bpe-Chr4:21006203 0 dispersed
Bpe03g01169 Bpe-Chr3:30663968 Bpe03g01173 Bpe-Chr3:30687936 1.62E-80 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01173 K03252 - qsu:112026168 1297.34