Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe03g01190 | ATGAACGACTTGTTTTCTTCCCGGTCTTTCTCCCGCGGTCGAACAGGCGTTGAGATGACGAATTCGAATTCACCGACCGCCGTCAATCTCGACAAGTTCTTCGAGGACGCTGAGTCGGTGAAGGACGAGCTGAGGGAGCTCGACGATTTGTATACTCGACTGAAACATTCTCATGAGCAGAGCAAGACTCTCCACAACGCAAAGACCGTGAAGGACCTCCGTTCTCGAATGGACTCGGATGTATCTCTCGCTCTCAAGAAAGCGAAGCTCATTAAGGTTCGGTTGGAAGCCTTAGACAGGGCTAATGCTGCTAATCGGAGCTTACCTGGCTGTGGACCAGGATCTTCGTCGGACCGGACGAGAACGTCGGTGGTCAACGGGCTGAGGAAGAAATTGCAGGACTCTATGGAGAGCTTCAACAATCTGAGGCAGGAGATCTCATCGGAATACAGAGATACCGTACAGCGGAGGTACTACACCGTCACCGGAGAAAATCCTGACGAGAAAACCATTGACCTACTGATCTCTACAGGGGAAAGCGAGACATTCTTGCAGAGAGCGATTCAAGAACAAGGAAGAGGCAGAGTTTTGGACACCATCAATGAAATTCAAGAGAGGCACGATGCAGTAAAAGATATGGAGAAGAACCTCAAGGAACTCCACCAAGTTTTCATGGATATGTCCGTGTTGGTGCAGGCTCAAGGAGAGCAACTCGACGACATTGAGAGCCAAGTGGCAAGAGCTCATTCGTTCGTTAGAGGCGGAACGCAGGAGTTGCACACGGCGAGGGTATATCAGAAAAATACACGGAAATGGGTGATTATTTCTGTTGTTGTTTTGGTGATTATCATCATTGTGATTGTTCTTATAATCGTTAAGCCTGGGAGTAATAGTGGTAATTCATCGTCGCCATAG | 915 | 48.63 | MNDLFSSRSFSRGRTGVEMTNSNSPTAVNLDKFFEDAESVKDELRELDDLYTRLKHSHEQSKTLHNAKTVKDLRSRMDSDVSLALKKAKLIKVRLEALDRANAANRSLPGCGPGSSSDRTRTSVVNGLRKKLQDSMESFNNLRQEISSEYRDTVQRRYYTVTGENPDEKTIDLLISTGESETFLQRAIQEQGRGRVLDTINEIQERHDAVKDMEKNLKELHQVFMDMSVLVQAQGEQLDDIESQVARAHSFVRGGTQELHTARVYQKNTRKWVIISVVVLVIIIIVIVLIIVKPGSNSGNSSSP | 304 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 30806605 | 30807990 | - | Bpe013086.1 | Bpe03g01190 | 101695 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe03g01190 | 304 | CDD | SynN | 30 | 187 | IPR006011 | GO:0016020 | |
Bpe03g01190 | 304 | CDD | SNARE_syntaxin1-like | 199 | 259 | - | - | |
Bpe03g01190 | 304 | PANTHER | BNAA05G27280D PROTEIN | 8 | 293 | - | - | |
Bpe03g01190 | 304 | ProSitePatterns | Syntaxin / epimorphin family signature. | 206 | 245 | IPR006012 | GO:0005484|GO:0006886|GO:0016020 | |
Bpe03g01190 | 304 | Gene3D | - | 28 | 160 | - | - | |
Bpe03g01190 | 304 | SUPERFAMILY | t-snare proteins | 29 | 255 | IPR010989 | GO:0016020|GO:0016192 | |
Bpe03g01190 | 304 | Coils | Coil | 125 | 149 | - | - | |
Bpe03g01190 | 304 | Gene3D | - | 196 | 293 | - | - | |
Bpe03g01190 | 304 | Pfam | SNARE domain | 236 | 288 | IPR000727 | - | |
Bpe03g01190 | 304 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 200 | 262 | IPR000727 | - | |
Bpe03g01190 | 304 | Coils | Coil | 200 | 220 | - | - | |
Bpe03g01190 | 304 | SMART | tSNARE_6 | 195 | 262 | IPR000727 | - | |
Bpe03g01190 | 304 | PANTHER | SYNTAXIN | 8 | 293 | IPR045242 | - | |
Bpe03g01190 | 304 | Coils | Coil | 30 | 57 | - | - | |
Bpe03g01190 | 304 | Pfam | Syntaxin | 32 | 235 | IPR006011 | GO:0016020 | |
Bpe03g01190 | 304 | SMART | SynN_4 | 25 | 151 | IPR006011 | GO:0016020 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g01190 | Bpe-Chr3:30806605 | Bpe08g00351 | Bpe-Chr8:2103594 | 7.08E-126 | dispersed | |
Bpe02g00700 | Bpe-Chr2:4746882 | Bpe03g01190 | Bpe-Chr3:30806605 | 1.19E-142 | wgd | |
Bpe03g01190 | Bpe-Chr3:30806605 | Bpe04g01486 | Bpe-Chr4:21389123 | 7.31E-177 | wgd | |
Bpe03g01190 | Bpe-Chr3:30806605 | Bpe04g00619 | Bpe-Chr4:3961756 | 6.41E-151 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe03g01190 | K08486 | - | csv:101208931 | 463.381 |