Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01193 ATGGCGACGTACTTTCAGGGTAATCCAGAAATCCAAGCTCCAGATGGATTACAGACGCTAGCACTCATGAATCCTGGCTACGTACAGTTCTCTGATTCCCTTACGCCGCCTCCGACCAACATTGCATTCTTCAATTCTGGTGCCGGAAATTCTCTGACTTCTCAGAATCTTCACCACGCGCCCACATCCAAATCCCCGCAATTCGCCGGGATTCCTTTGCCGGTTTCTCTTTCCCCTGCTTCAAAAGAACCTAATTCTCAGCCCACCCATCCCCACCATTTGTCCGCCTCGCATGGACTCGTCCCCCAAGCCAAATTCAATCACTTGAATCCGATCAACTCCCCAGGCGCGCGTGAATCTCAACGCACCACACAAGGACTTTCCCTCAGCCTCTCCTCTCAGCAGCCCGGTTATGGTTATGGGTCTCAACGAACCGGACGAGAAACCTCATCCCCAGCTCAACACGCAGTTTTCGGCGAGGGAATTCGGATTTCCGGTAATACGAACTACGTTTCAGGTGTACATGGTGTGTTGCTGTGCTCAAAGTACTTGAAAGCGGCCCAAGATCTCCTCGAAGAAGTCGTCAATCTAGGCACCGATGAAACTAAGAATGAATTACCGAGAAAACCTAACGGCACAAAGCTCACCGAAGAGCCATCTATGACGGCAACCGAAAATGGCTCAGACGGAGCTGAAGAAGCTCGCAAGGACAGTCCAGAGCTTTCAACAGCAGAGAGACAGGACATTCAGATAAAGAAAGCAAAGCTTATCAGTATGCTTGATGAGGTCGAGCAAAAGTACAGACAATACCATCATCAGATGCAGATCGTGATATCGTCGTTCAAACAAGCGACTGGAATGGGTTCGGCAAGATCGTACACATCACTTGCTCTCAAAACAATTTCGAAGCAATTCCGGTGCTTGAAAGACACAATTACAGGCCAAATTAGGGCAGCAAACAAGAGTTTAGGGGAAGAAGATAATGCGGGGGGTAAGATAGGTAGTTCGAGGCTGAAATTTGTGAATCATCAGCTTGGACAGCAAAGAGCTCTTCAGCAACTGGGAATGATCCAGCAGAACGCTTGGAGACCCCAGAGAGGCCTACCTGAACGCTCTGTCTCTGTCCTTCGCGCTTGGCTTTTCGAACATTTTCTCCACCCGTATCCAAAGGATTCGGATAAGCAAATGCTGGCCAAGCAAACAGGGCTTACGAGGAGCCAGGTTTCTAATTGGTTCATAAACGCACGAGTTCGTCTATGGAAGCCAATGGTAGAAGAAATGTATACGGAGGAAACCCAGAAGCAAGAACAGATTGGTTGTGCAGAAACCATCAACAAAATCAAAGAAAACTCACCTTCCAACTCCATTTATCCGACAGAAAAAGGTCCTCCAATTCAAAATATTCCTCCAAGTTCCCATTCTACAGACGAACTTTCTACACTCACAGCCTCTAAATCTTCCATGGGAGGAAACGTTCGAAACTCATCCGCATTGAGGGTCCCCAGGCCGTCGGAGCTTGGATCAAGTCCTAAAAAACCAAAGAACTCCGAAATGATAATGAATTCTTCATCCAACTTCATCAACGGAAAGCAAGCTCAATCGAACCCCAAGAACAGTTCGGTGAAAGTAGCCGACGGGAAGCCAAGCCGAGATGAATTCTCAGTTCCGATGAACCAAACTGATTTTTCAGGCGGATTCGTAGAGTCTCCAATCAGTCAAATAGGCCGATACAATGACGAGCAATACACGGCTCGTTTTTCCGGCAATGGCGTCTCCCTCACTCTCGGGCTCCCCCGCCATAATTTTCTTCCGAGCCACCAACCCATCCATTTGGGAGGACGAATCAACATCAGCGAACCAAACGAGTTTGCCGGAATAAAGTGTCCAACTCCTCATCCCGCCACTGCTTTCGACAACATCGATATTCAAAACAGAAAACGATTTGTCGCGCAATTGTTGCCAGATTTCGTGGCCTAA 1977 48.1 MATYFQGNPEIQAPDGLQTLALMNPGYVQFSDSLTPPPTNIAFFNSGAGNSLTSQNLHHAPTSKSPQFAGIPLPVSLSPASKEPNSQPTHPHHLSASHGLVPQAKFNHLNPINSPGARESQRTTQGLSLSLSSQQPGYGYGSQRTGRETSSPAQHAVFGEGIRISGNTNYVSGVHGVLLCSKYLKAAQDLLEEVVNLGTDETKNELPRKPNGTKLTEEPSMTATENGSDGAEEARKDSPELSTAERQDIQIKKAKLISMLDEVEQKYRQYHHQMQIVISSFKQATGMGSARSYTSLALKTISKQFRCLKDTITGQIRAANKSLGEEDNAGGKIGSSRLKFVNHQLGQQRALQQLGMIQQNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKQMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYTEETQKQEQIGCAETINKIKENSPSNSIYPTEKGPPIQNIPPSSHSTDELSTLTASKSSMGGNVRNSSALRVPRPSELGSSPKKPKNSEMIMNSSSNFINGKQAQSNPKNSSVKVADGKPSRDEFSVPMNQTDFSGGFVESPISQIGRYNDEQYTARFSGNGVSLTLGLPRHNFLPSHQPIHLGGRINISEPNEFAGIKCPTPHPATAFDNIDIQNRKRFVAQLLPDFVA 658
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30826921 30829275 - Bpe013089.1 Bpe03g01193 101698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01193 658 Coils Coil 246 266 - -
Bpe03g01193 658 Pfam Homeobox KN domain 379 418 IPR008422 GO:0003677|GO:0006355
Bpe03g01193 658 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 614 - -
Bpe03g01193 658 SMART prehox3 172 314 IPR006563 -
Bpe03g01193 658 MobiDBLite consensus disorder prediction 107 152 - -
Bpe03g01193 658 MobiDBLite consensus disorder prediction 509 542 - -
Bpe03g01193 658 MobiDBLite consensus disorder prediction 449 502 - -
Bpe03g01193 658 MobiDBLite consensus disorder prediction 201 246 - -
Bpe03g01193 658 CDD homeodomain 362 423 IPR001356 GO:0003677
Bpe03g01193 658 MobiDBLite consensus disorder prediction 54 153 - -
Bpe03g01193 658 Pfam Associated with HOX 177 313 IPR006563 -
Bpe03g01193 658 Gene3D - 365 442 - -
Bpe03g01193 658 ProSiteProfiles 'Homeobox' domain profile. 359 422 IPR001356 GO:0003677
Bpe03g01193 658 SMART HOX_1 362 426 IPR001356 GO:0003677
Bpe03g01193 658 MobiDBLite consensus disorder prediction 229 246 - -
Bpe03g01193 658 MobiDBLite consensus disorder prediction 79 93 - -
Bpe03g01193 658 SUPERFAMILY Homeodomain-like 363 429 IPR009057 -
Bpe03g01193 658 MobiDBLite consensus disorder prediction 449 557 - -
Bpe03g01193 658 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 614 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01193 Bpe04g00620 CCT
Bpe02g00702 Bpe03g01193 CCT
Bpe03g01193 Bpe04g01489 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00869 Bpe-Chr2:6655885 Bpe03g01193 Bpe-Chr3:30826921 4.97E-59 dispersed
Bpe02g01536 Bpe-Chr2:18472366 Bpe03g01193 Bpe-Chr3:30826921 4.01E-51 dispersed
Bpe03g01193 Bpe-Chr3:30826921 Bpe11g00665 Bpe-Chr11:5111635 3.28E-78 dispersed
Bpe14g00258 Bpe-Chr14:2688643 Bpe03g01193 Bpe-Chr3:30826921 2.00E-47 dispersed
Bpe02g00702 Bpe-Chr2:4780476 Bpe03g01193 Bpe-Chr3:30826921 0 wgd
Bpe03g01193 Bpe-Chr3:30826921 Bpe04g01489 Bpe-Chr4:21461045 0 wgd
Bpe03g01193 Bpe-Chr3:30826921 Bpe04g00620 Bpe-Chr4:3964303 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
21158 PF07526 POX 4.10E-47 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01193 - - zju:107433631 682.559