Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01256 ATGAAGGCGAAGGAGACGAAAAGTTTTTCTCTTTCTCTCTCCTCCATACCTACTGCAGTCTTCTTCTTCTTCTTCCTCCTCCTCTGTTACACGGCTTCTTCTACCTTGTCGCCTCCCAATGACACCTCTGTACTCACCCATTTCCGCGTCGGCGCTGATTCCCACGGAAATCTTCTGCCCAATTGGACCGGCTCCGATGCATGCGCCGCTGCATGGCTGGGAGTTCAATGCTCGTCTGCCGGCCGCGTTATCGCTCTCTCACTACCGTCGATCAACCTCCGGGGCCCAGTTCTGAATCTGGCTAAGCTTGACCAACTTCGCCTTCTCGACCTCCATGATAACCGCCTGAACGGAACCGTTTTGCCCCTCATGAACTGCACCCAACTCAAGCTTCTGTATCTTGCCGGCAATGACTTCTCCGGCGAGATTCCACCGGAGATTTCCTCACTCAGGCACATCATCCGACTTGATCTCTCCGATAACAACATACGAGGCGTGATTCCCAACGAACTCTCGCGATTGACTCGACTCCTCACGCTTCGGCTTAATAATAACATGATTTCTGGTACAGTTCCAGATCTTTCCTCTTCACTCGTCAATCTAACAGAATTGAATTTGATGAACAATGATCTGTCCGGAAGATTGCCCGATAATGTGCTCAGAAAATTCGGCCCAAAAAGCTTTTCAGGAAACGAAGGTCTATGCGGATCAACACCGTTGGGTGCTTGTTCCTTCACTGGAATTTCACCGGAGATAGCTTCTTCGCAAACGGTACCGTCAAATCCTAGCTCAATCCCTCAAACTCCAATTCTAACCGAAGATGATAAAAAATCGCACAAATCCCTTAGCACTGGCGCTATAGTGGCAATAGCAATCGCCAATTCCGTTGCATTGCTGGTAATCATCTCCTTCGTCGTCGCCCACTACTGCGCCAGATATCAAAGCTCGCTGTCAATGGCGGGAAGCGAAATCAGAAAGGGAAGAAGGAGCGGGAGCAGCTACGGAAGCGAGAAGAAAGTATACGCAAATGGAGGAGGAGACAGCGACGCGACAAACGCCACAGATCGAAGCAAGCTCGTGTTCTTCGACAGGAAGAAGCAGTTCGAGCTGGAGGATTTGCTGCGGGCGTCTGCGGAGATGCTGGGGAAAGGCAGTCTAGGGACGGTGTACAGAGCGGTGTTGGATGACGGCTGTACGGTGGCGGTGAAGAGGTTGAAGGACGCGAATCCATGCGCGAGGAAGGAGTTCGAACAGTACATGGATTTAATAGGGAGGCTGAGACACCCAAATGTAGTAAAGCTCAGAGCTTACTATTATGCGAGGGAGGAGAAGCTTCTGGTTTATGATTATCTTCCAAATGGAAGCTTGCATTATCTTCTTCACGGGAATAGGGGTCCAGGAAGAATCCCACTGGATTGGACCACCAGAATCAGCTTGGTGCTGGGAGCAGCCCGAGGGCTTGCCAGGATTCACGCAGAGTACGGCGAAACAAGAATCCCCCATGGCAACGTCAAGTCTTCCAATGTTCTTCTCGACAAAAACGGTCTCGCATGCATTTCGGATTTCGGGTTGTCTCTCCTTCTAAACCCGGTTCACGCCATTGCAAGATTGGGAGGATACAAAGCTCCAGAACAAGCCGAGACTAAGAAGTTGTCTCAGCAGGCAGACGTATACAGCTTTGGAGTCTTGTTACTCGAAACACTCACTGGTCGAGCTCCGTTACAGTATCCTTCACATCCCAGGGCTAGAATGGAGGAGGAAGAAGATGGAGGAGAAGAAGATCTTCCAAAATGGGTACGATCCGTGGTGAAAGAAGAATGGACCGCCGAAGTGTTTGATCCGGAGCTTTTGAGGTACAAAAACATTGAAGAGGAGCTTGTCTCCATGCTTCACGTTGGGCTAGCCTGCGTTGTATGGCCACCGGAAAAGAGGCCATCAATGGCTGAAGTTGCAAAGATGATCGAGGATATCAGAGTTGAACAGTCTCCGCTAGGAGAAGACTACGACGAGTCCAGAAATTCACTTTCGCCCTCTTTGGCCACCACCGAAGATTGA 2055 50.36 MKAKETKSFSLSLSSIPTAVFFFFFLLLCYTASSTLSPPNDTSVLTHFRVGADSHGNLLPNWTGSDACAAAWLGVQCSSAGRVIALSLPSINLRGPVLNLAKLDQLRLLDLHDNRLNGTVLPLMNCTQLKLLYLAGNDFSGEIPPEISSLRHIIRLDLSDNNIRGVIPNELSRLTRLLTLRLNNNMISGTVPDLSSSLVNLTELNLMNNDLSGRLPDNVLRKFGPKSFSGNEGLCGSTPLGACSFTGISPEIASSQTVPSNPSSIPQTPILTEDDKKSHKSLSTGAIVAIAIANSVALLVIISFVVAHYCARYQSSLSMAGSEIRKGRRSGSSYGSEKKVYANGGGDSDATNATDRSKLVFFDRKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCARKEFEQYMDLIGRLRHPNVVKLRAYYYAREEKLLVYDYLPNGSLHYLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYGETRIPHGNVKSSNVLLDKNGLACISDFGLSLLLNPVHAIARLGGYKAPEQAETKKLSQQADVYSFGVLLLETLTGRAPLQYPSHPRARMEEEEDGGEEDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVVWPPEKRPSMAEVAKMIEDIRVEQSPLGEDYDESRNSLSPSLATTED 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31177856 31179992 + Bpe025429 Bpe03g01256 101761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01256 684 SUPERFAMILY L domain-like 39 229 - -
Bpe03g01256 684 CDD STKc_IRAK 381 657 - -
Bpe03g01256 684 MobiDBLite consensus disorder prediction 326 349 - -
Bpe03g01256 684 MobiDBLite consensus disorder prediction 254 271 - -
Bpe03g01256 684 Gene3D Transferase(Phosphotransferase) domain 1 451 675 - -
Bpe03g01256 684 MobiDBLite consensus disorder prediction 254 276 - -
Bpe03g01256 684 SUPERFAMILY Protein kinase-like (PK-like) 379 654 IPR011009 -
Bpe03g01256 684 ProSiteProfiles Protein kinase domain profile. 375 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g01256 684 Gene3D Ribonuclease Inhibitor 127 245 IPR032675 -
Bpe03g01256 684 PANTHER LRR RECEPTOR-LIKE KINASE 26 676 - -
Bpe03g01256 684 Pfam Protein kinase domain 379 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe03g01256 684 Gene3D Phosphorylase Kinase; domain 1 346 450 - -
Bpe03g01256 684 MobiDBLite consensus disorder prediction 668 684 - -
Bpe03g01256 684 MobiDBLite consensus disorder prediction 661 684 - -
Bpe03g01256 684 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 676 - -
Bpe03g01256 684 Gene3D Ribonuclease Inhibitor 40 126 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01256 Bpe-Chr3:31177856 Bpe13g01075 Bpe-Chr13:16329234 2.63E-152 dispersed
Bpe03g01256 Bpe-Chr3:31177856 Bpe02g02022 Bpe-Chr2:21840515 9.07E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63270 PF00069 Pkinase 8.20E-32 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01256 - - bhj:120091526 1008.82