Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01260 ATGGAAGCTTGTCATTGTACACCTACCCATCTTCACCTCCTCCCCTCTAAACGTTTTGTTTCTCGTCGGTTCTCCTTGAATGGAGCAGAGGTCTCTACCACATTTATTTCCGCCGCCTCATCTCGAAAAACCATCCCGTCCATCTCCGCAACCCTTTCCAAGTCGGCGGAAGAAATCTCTGCCAAGTCCTCCGCCGCCACCTCCGTCCCTAAACATGAAGATCCGTCATCAACGTCTCACTCTCGTCTCAAAGTATCCCCGGATTCGCTGCAGTTCGAAGCTGGTTTTTTAGGGGCTGTTCCAGACCGTACGTCTGGTGGGGGAACTGATAAGGATCTCAATGCCATGGAATATCTTACTAATATTCTTTCTTCGAAGGTCTACGACGTTGCCATTGAATCCCCGTTGCAGCTCGCCCCAAAGCTCTCCGAGCGGTTGGGTGTTAAATTGTGGCTCAAGAGGGAGGATTTACAACCTGTGTTCTCATTCAAGCTTCGTGGAGCTTATAATATGATGGCAAAACTTCCCAAAGAACAATTAGAAAGAGGAGTTATCTGCTCGTCAGCTGGAAATCATGCCCAAGGAGTTGCTTTGGCCGCCAAGAAACTTGGCTGTGATGCCGTGATTGCTATGCCAGTCACTACCCCTGAAATTAAGTGGCAATCTGTGGAGAAGTTAGGAGCAACTGTTGTTCTTATTGGAGACTCCTACGATGAGGCACAAGCTTATGCTCGAAAACGTGGTAAAGAGGAAGGTCGGACATTTATACCTCCTTTTGATCATCCAGATGTCATAACTGGACAGGGAACAGTAGGGATGGAAATCTTGCATCAAATGCGTGGACCTCTTCATGCAATATTTGTGCCCGTGGGAGGTGGTGGACTTATAGCAGGCATTGCTTCATATATGAAGAGGGTTTCTCCTGAGGTGAAGATTATTGGAGTAGAGCCCTCTGATGCAAATGCAATGGCACTGTCATTACATCATGGCAAGAGGGTGATGTTGGACCAGGTTGGAGGTTTTGCTGATGGTGTAGCAGTTAAAGAGGTTGGCGAAGAAACTTTTCGTTTATGCAAAGATTTGGTGGATGGTGTTGTTCTAGTTAGCCGTGATGCTATATGTGCCTCAATTAAGGACATGTTTGAGGAGAAAAGGAGCATCTTAGAACCTGCAGGTGCTCTTTCGCTCGCAGGAGCCGAAGCATACTGCAAATATTATGGGCTGAAGGGAGAAAATGTTGTAGCAATTACAAGTGGTGCAAATATGAACTTTGATAAACTGAGGGTTGTGACAGAGCTTGCAAATGTTGGTCGCCAACAAGAGGCCGTGCTTGCAACTACCATGCCGGAGGAGCCTGGGAGCTTCAAACGATTTTGTGAACTGGTGGGTCCTATGAATATCACTGAATTCAAATACCGATGCAACTCTGACAAAAAGGCCGTGATGAAATTGTTTCTCCATTCAAACAGTGTTGGCATTCATACTGCTTCTGAATTGGAGGCAATGAAGAAGCGGATGGAATCTTCTCAACTTAAAACTTACAATCTCACCGGAAGTGACTTGGTTAAAGATCATTTACGTTATTTGATGGGAGGTAGATCAAATGTTGAAAATGAAGTTCTTTGTCGCTTTGTCTTTCCGGAGCGGCCAGGTGCTTTAATGAAGTTCTTGAACTCTTTCAGCCCACGCTGGAATATTAGCTTGTTCCATTACCGCGGACAGGGTGAGACTGGTGCAAATGTATTGGTTGGAATTCAGGTCCCATCCTCTGAAATGAATGAATTCCACTTTCGGGCCAACGGTCTCGGATATGATTATGCAGCCGTAACTGATGACATTAACTTCCAGCTTTTGATGCATTGA 1863 45.84 MEACHCTPTHLHLLPSKRFVSRRFSLNGAEVSTTFISAASSRKTIPSISATLSKSAEEISAKSSAATSVPKHEDPSSTSHSRLKVSPDSLQFEAGFLGAVPDRTSGGGTDKDLNAMEYLTNILSSKVYDVAIESPLQLAPKLSERLGVKLWLKREDLQPVFSFKLRGAYNMMAKLPKEQLERGVICSSAGNHAQGVALAAKKLGCDAVIAMPVTTPEIKWQSVEKLGATVVLIGDSYDEAQAYARKRGKEEGRTFIPPFDHPDVITGQGTVGMEILHQMRGPLHAIFVPVGGGGLIAGIASYMKRVSPEVKIIGVEPSDANAMALSLHHGKRVMLDQVGGFADGVAVKEVGEETFRLCKDLVDGVVLVSRDAICASIKDMFEEKRSILEPAGALSLAGAEAYCKYYGLKGENVVAITSGANMNFDKLRVVTELANVGRQQEAVLATTMPEEPGSFKRFCELVGPMNITEFKYRCNSDKKAVMKLFLHSNSVGIHTASELEAMKKRMESSQLKTYNLTGSDLVKDHLRYLMGGRSNVENEVLCRFVFPERPGALMKFLNSFSPRWNISLFHYRGQGETGANVLVGIQVPSSEMNEFHFRANGLGYDYAAVTDDINFQLLMH 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31198575 31202062 - Bpe013156.3 Bpe03g01260 101765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01260 620 Gene3D Biosynthetic Threonine Deaminase; Domain 3 441 620 IPR038110 -
Bpe03g01260 620 PANTHER THREONINE DEHYDRATASE 58 619 - -
Bpe03g01260 620 TIGRFAM ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 117 618 IPR005787 GO:0004794|GO:0009097
Bpe03g01260 620 MobiDBLite consensus disorder prediction 62 84 - -
Bpe03g01260 620 CDD ACT_ThrD-I_2 539 619 - -
Bpe03g01260 620 Gene3D - 135 413 IPR036052 -
Bpe03g01260 620 Pfam Pyridoxal-phosphate dependent enzyme 130 419 IPR001926 -
Bpe03g01260 620 PANTHER THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED 58 619 - -
Bpe03g01260 620 ProSiteProfiles ACT-like domain profile. 540 611 IPR001721 -
Bpe03g01260 620 Gene3D - 167 258 IPR036052 -
Bpe03g01260 620 CDD Thr-dehyd 119 423 - -
Bpe03g01260 620 CDD ACT_ThrD-I_1 441 529 - -
Bpe03g01260 620 ProSitePatterns Serine/threonine dehydratases pyridoxal-phosphate attachment site. 155 168 IPR000634 GO:0006520|GO:0030170
Bpe03g01260 620 ProSiteProfiles ACT-like domain profile. 442 518 IPR001721 -
Bpe03g01260 620 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 113 469 IPR036052 -
Bpe03g01260 620 Pfam C-terminal regulatory domain of Threonine dehydratase 532 616 IPR001721 -
Bpe03g01260 620 Pfam C-terminal regulatory domain of Threonine dehydratase 432 526 IPR001721 -
Bpe03g01260 620 SUPERFAMILY ACT-like 527 618 IPR045865 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe02g00739 Bpe03g01260 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01260 Bpe-Chr3:31198575 Bpe05g00991 Bpe-Chr5:22712719 4.75E-06 dispersed
Bpe07g00113 Bpe-Chr7:817808 Bpe03g01260 Bpe-Chr3:31198575 5.49E-35 transposed
Bpe08g01291 Bpe-Chr8:14270639 Bpe03g01260 Bpe-Chr3:31198575 0 transposed
Bpe10g00759 Bpe-Chr10:13860090 Bpe03g01260 Bpe-Chr3:31198575 5.55E-07 transposed
Bpe02g00739 Bpe-Chr2:5129645 Bpe03g01260 Bpe-Chr3:31198575 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01260 K01754 - qsu:111997153 937.176