Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bpe03g01261 | ATGGAGCTTTTTCTTCTTCCTTGCCACCAAACTAAACCTACTATCCTGCAGAAGCTGACTTTCATGGAATCAACAGGAAAGAGCAGTCCCAAGAGGAATTCATACGCCTTGCCATGTCGATGTTCATCGTCATCCTCGGACTGTGAATTTACTGAACAAACTAAACAACCATTGCGAGGTGATGGACGGAGAGAATTGCTCGGTGCCATCCTATCAACTGCTGCCGGCGTTTATGTCTGTGATGCAGCAGAGGCCGTTAGCACAAGCCGAAGGGCTCTTAGAGGATCAAAAATACCTGAAAGTGAATTCACAACCCTCCCCAATGGTCTAAAGTACTATGATATCAAGGTCGGCAGTGGAACAAAGGCCGTGACTGGATCTCGTGTTGCAGTCCATTATGTTGCTAAGTGGAGAGGCATCACATTTATGACAAGCAGGCAAGGGATGGGTGTTGGTGGAGGAACGCCTTATGGATTCGATGTAGGCCAATCTGAAAGAGGGTCAGTGCTCAAAGGATTAGATTTAGGTGTACAAGGCATGAGGGTGGGAGGGCAGAGACTGCTAATTGTTCCTCCTGAGTTAGCATATGGAAGCAAAGGAGTTCAGGAGATTCCCCCTAATGCAACCATTGAGGTAGAATTTCATCATATAATTTCCCACACTTTCTGCAATTAA | 675 | 46.22 | MELFLLPCHQTKPTILQKLTFMESTGKSSPKRNSYALPCRCSSSSSDCEFTEQTKQPLRGDGRRELLGAILSTAAGVYVCDAAEAVSTSRRALRGSKIPESEFTTLPNGLKYYDIKVGSGTKAVTGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGQSERGSVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNATIEVEFHHIISHTFCN | 224 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 31202745 | 31204333 | + | Bpe013157.1 | Bpe03g01261 | 101766 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bpe03g01261 | 224 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 121 | 211 | IPR001179 | GO:0003755 | |
| Bpe03g01261 | 224 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 5 | 214 | - | - | |
| Bpe03g01261 | 224 | Gene3D | - | 81 | 220 | IPR046357 | GO:0003755 | |
| Bpe03g01261 | 224 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC | 5 | 214 | - | - | |
| Bpe03g01261 | 224 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 126 | 220 | IPR001179 | GO:0003755 | |
| Bpe03g01261 | 224 | SUPERFAMILY | FKBP-like | 80 | 211 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bpe02g00299 | Bpe-Chr2:1981983 | Bpe03g01261 | Bpe-Chr3:31202745 | 1.55E-18 | dispersed | |
| Bpe02g01012 | Bpe-Chr2:10319753 | Bpe03g01261 | Bpe-Chr3:31202745 | 3.48E-15 | dispersed | |
| Bpe03g01261 | Bpe-Chr3:31202745 | Bpe13g00459 | Bpe-Chr13:12097157 | 1.05E-16 | dispersed | |
| Bpe11g00599 | Bpe-Chr11:4561943 | Bpe03g01261 | Bpe-Chr3:31202745 | 4.26E-06 | dispersed | |
| Bpe03g01261 | Bpe-Chr3:31202745 | Bpe03g00097 | Bpe-Chr3:1464278 | 2.87E-13 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bpe03g01261 | - | - | mdm:103423311 | 322.783 |