Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01266 ATGTCTCCGGCAATGGTGATAGCGACGACGGAGAGAAATCATGAAAGTCTCTCAGAAAATACCCAATACCAGAAAGGAGTGAAGCTCATAGTTGAAAATGGAGTAACAAAAGTCCCATCCAAATACGTCCTACCCAATTCTGATCGTCCCTCTGCAGATAAACAAGCCCAAAAATTAGCCTTCGACGATCATATTAAACTGCCTGTAATCGATTTTGCAAAATTGCGAGGTCCTAATAGGGATCAAGTCCTTCGTTCCCTTGCTAACGCATGCGAAACATATGGGTTTTTTCAGCTGGTGAACCATGAGATTTGCAGCGATGTTATAAGGAGTATGATGGAGGTGAGCAAGAGGTTTTTCCAGCTTCCATTTGAGGAAAGAGCTAAGTACATGACGTCTGATATGAGCTTCCCAGTTCGATATGGAACCAGCTTTAACCAAAACAAAGACCAAGTCTTTTGCTGGAGAGATTTCTTGAAGCTAACGTGCCACCCTTTATCAGAATCTCTCCCTTACTGGCCTTCTTCTCCATCGGATTTGAGGGAAACGGCGGCTACCTACGCAGAAGAAACAAGAGGGTTGTTCTTAACGCTGGTGGAAGCCATTGTTGAGAGCTTAGGACTGAACCAGAACGACGACGATATCTTGAAACAAATAGAAGGCGGCACGCAACTAATGGTGGTGAATTGTTACCCGCCTTGTCCAGAACCAGATCTAACCCTAGGAATGCCACCTCATTCTGACTATGGCTTCCTCACTCTTCTTCTTCAAGACCAAGTTGAAGGCCTCCAAATCCATTTCCAAGACAAATGGCTCACCGTTCAACCCCTCGCTAACTCTTTCGTCATCAACGTCGGCGATCACCTCGAGGTGAAAGAGGAATTGCGGAAGGAAACTCTTCTACTTGCCAAGTCAATGAATCAGACAGAAGAAGAGTCGGAGAATATGCATCAACAACTTCTTGATAAAGAAATCGAGCTTGCTACATTTGTGCAGAAGTACAAGAAGCTGCGTGTAGATTACCACAAGCGAGCACTTACCCTTTTGGCTGCTAAAACGTCTTCTGAGAATTGA 1074 44.69 MSPAMVIATTERNHESLSENTQYQKGVKLIVENGVTKVPSKYVLPNSDRPSADKQAQKLAFDDHIKLPVIDFAKLRGPNRDQVLRSLANACETYGFFQLVNHEICSDVIRSMMEVSKRFFQLPFEERAKYMTSDMSFPVRYGTSFNQNKDQVFCWRDFLKLTCHPLSESLPYWPSSPSDLRETAATYAEETRGLFLTLVEAIVESLGLNQNDDDILKQIEGGTQLMVVNCYPPCPEPDLTLGMPPHSDYGFLTLLLQDQVEGLQIHFQDKWLTVQPLANSFVINVGDHLEVKEELRKETLLLAKSMNQTEEESENMHQQLLDKEIELATFVQKYKKLRVDYHKRALTLLAAKTSSEN 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31227514 31238544 - Bpe013162.1 Bpe03g01266 101771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01266 357 Pfam Modifier of rudimentary (Mod(r)) protein 298 346 IPR009851 -
Bpe03g01266 357 ProSiteProfiles VPS37 C-terminal domain profile. 286 357 IPR009851 -
Bpe03g01266 357 Pfam 2OG-Fe(II) oxygenase superfamily 225 291 IPR044861 -
Bpe03g01266 357 Gene3D Helix hairpin bin 295 353 IPR029012 -
Bpe03g01266 357 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE-RELATED 21 302 - -
Bpe03g01266 357 SUPERFAMILY Clavaminate synthase-like 25 291 - -
Bpe03g01266 357 Coils Coil 292 326 - -
Bpe03g01266 357 Pfam non-haem dioxygenase in morphine synthesis N-terminal 67 168 IPR026992 -
Bpe03g01266 357 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 302 - -
Bpe03g01266 357 Gene3D - 17 294 IPR027443 -
Bpe03g01266 357 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 221 357 IPR005123 -
Bpe03g01266 357 SUPERFAMILY Endosomal sorting complex assembly domain 302 344 IPR037202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01266 Bpe-Chr3:31227514 Bpe04g00653 Bpe-Chr4:4112182 1.35E-145 dispersed
Bpe03g01266 Bpe-Chr3:31227514 Bpe04g00776 Bpe-Chr4:4987101 7.51E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01266 - - fve:101302283 414.075