Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01275 ATGGCCATTCTCCGCATTGCCGTAGGTAGGCGGGAGGAGGCCACTCATCCCGACGCATTGAAGGCCGCGTTGGCTGAGTTCTTTTCAACGTTGATTTTCGTTTTCGCTGGCCAAGGTTCTGGCATGGCCTTCTCTAAGCTGACGAACGACGGCTCTGCTACCCCATCCGGCCTCATTGCGGCCTCTCTCGCTCACGGGTTTGGCCTTTTTGTGGCCGTGTCTGTCGGTGCGAATATCTCCGGCGGCCATGTTAACCCTGCTGTCACCTTCGGAGCATTCGTCGGAGGTAACATCACTCTTTTACGTGCCATTCTTTATTGGATCGGCCAACTTCTCGGGTCAACCGTCGCCTGTTTGCTCCTCTGGTTCGTCACTGACATGTCTACAACAGCTTTCTCTCTGTCATCCGGCGTGGGAGTTTGGAACGCTGTCGTTTTCGAAATTGTGATGACATTTGGATTAGTCTACACAGTTTACGCCACTGCCATCGATCCCAAGAAGGGCAACCTGGGAACCATTGCTCCGATTGCCATTGGTTTGATCGTGGGCGCTAACATTTTAGTCGGCGGAGCTTTTGACGGAGCCTCCATGAACCCAGCCGTGTCTTTTGGCCCAGCCTTGGTTAGCTGGACATGGAAGAACCAATGGGTCTATTGGGTCGGACCACTCATCGGTGGCGGCTTAGCCGGTATAGTGTACGAGTTCTTCTTTATCAACCGTAGCCACGAGCAGCTTCCGACAACCGACTAT 750 53.73 MAILRIAVGRREEATHPDALKAALAEFFSTLIFVFAGQGSGMAFSKLTNDGSATPSGLIAASLAHGFGLFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRAILYWIGQLLGSTVACLLLWFVTDMSTTAFSLSSGVGVWNAVVFEIVMTFGLVYTVYATAIDPKKGNLGTIAPIAIGLIVGANILVGGAFDGASMNPAVSFGPALVSWTWKNQWVYWVGPLIGGGLAGIVYEFFFINRSHEQLPTTDY 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31280109 31281199 + Bpe025432 Bpe03g01275 101780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01275 250 PANTHER AQUAPORIN TIP1-1 1 250 - -
Bpe03g01275 250 SUPERFAMILY Aquaporin-like 12 245 IPR023271 -
Bpe03g01275 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01275 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01275 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01275 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01275 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01275 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01275 250 CDD MIP 21 236 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01275 250 PANTHER AQUAPORIN-8 1 250 IPR034294 -
Bpe03g01275 250 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bpe03g01275 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Bpe03g01275 250 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe03g01275 Bpe04g00677 CCT
Bpe02g00774 Bpe03g01275 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00774 Bpe-Chr2:5541767 Bpe03g01275 Bpe-Chr3:31280109 3.45E-123 dispersed
Bpe03g01275 Bpe-Chr3:31280109 Bpe11g00779 Bpe-Chr11:5813498 1.75E-128 dispersed
Bpe12g00622 Bpe-Chr12:11888495 Bpe03g01275 Bpe-Chr3:31280109 2.82E-97 transposed
Bpe14g00514 Bpe-Chr14:4529349 Bpe03g01275 Bpe-Chr3:31280109 1.14E-83 transposed
Bpe03g01275 Bpe-Chr3:31280109 Bpe04g00677 Bpe-Chr4:4293103 1.72E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01275 K09873 - nnu:104587343 435.647