Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe03g01286 ATGGCATCCAATAGGGGTCAAGGTGGCATCCAGCAATTGCTAGCTGCTGAACAAGAAGCTCAACACATAGTTAATGCTGCAAGAAATGGGAAAACGGCTAGACTAAAACAGGCCAAGGATGAGGCTGAGAAGGAGATTGCAGAATATCGAGCTCAAGTGGAGTATGAGTTCCAGAAGAAACTCACGGAGAGTAGTGGAGACTCGGGGGCAAATGTCAAGCGGCTCGAACAAGAGACGGATGAAAAGATCCATCACTTGAAGAATGAGGCCTCGAGAATTTCGCATGGTGTGGTCAGCATGCTCCTCAAACAAGTGACGACCAATTTAAGAGTATGGTTGGAGATGAGCTCAGGCGCAGAAGGCTGTGTTGGATCATGGATGATGGGTGTGGTCAGTGGTGTGGGTGGAGCTTTTACGCAATCCCATTATACCCGCCACCGAACCCCCCAACCCAATCCAACCCAACCCAACCCAACCCAACCCCTTTATTCTTCTTCCTCATCATCCCCTCCATCCCTCCCTCTCTCCGCCATTGCTTTTTTCTATCGCATTTTGATTCCCTTTTCTTTTCCAATTGTGGGTTTTCTGTCAGTTTCTGGAAATTCCATGGGAAATACTAGCAGCAGTGGAGCTAACGGTCGGAGGAGACACGGTAGCCGGCGGAGCCACCCAACTCCGCCTCCTCCGGCTGCTCCGCAACCCGAAATCACGGCCAACAGATATGTTTTCGCTGCTGCTACCCCATACCCGTCTCAGTATCCAAACCAACACCCATCATATTACCAATATCCGGCCTACTATCCACCCCAGCCGCCTCCAACATCCATGCCGATGCCTTTGCCGGCGCCATACGATCACCACCACCGAGGAGCTCATCCCCACATGGATCCGGCGAATTGGGTCGGTGGGAGGTATCCTTGTGGGCCAGTTATGCCTCCTCAAACCCCCTACGTAGAGCACCAGAAAGCAGTTACCATACGAAATGATGTCAACCTGAAGAAGGAGACTCTGAGGATTGAACCGGACAGCCAAAATCCGGGGAAGTTTCTCGTCACCTTTATGTTTGATGCAACGGTTCCCGGCAGCATCACTGTTATGTTCTTTGCGAAAGAAGGCGAAGGTTGTAATCTGACACCCATGAAGGAAGACGTTCTAAAACCGGTGACGGTAGATTTTGAGAAGGGCCTGGGGCAAAAGTTCAGGCAGCCGGTCGGAACAGGGATTGAACTGGCAACATTTGAGGAAGAGTTATTGAAATTAAATGAGATGGATGTGTATCCTCTGGCAATAAAAGCAGAGGCTCTTCCAGACAATCAAACTGGAGCTGATGGAAGCCAAATACCAGGCACTAACAACTCCCAAATTACTCAGGCGGTGATCGAAAAAGACAGAGGTGAGTACCAGGTGAAAGTTTTGAAGCAGATTTTGTGGGTCAATAATATGAGATATGAGCTGCAAGAGATATTTGGGATTGGAAATTCAGTTGAGGGTGATGTTGATGGAAATGATCCTGGAAAAGAATGCGTCATTTGCTTGTCCGAACCACCCGACACCACTGTTCTTCCTTGCCGGCACATGGTAATTGTTATAATTTCTTCTCCGATTCTTTCTTGGGCTACTATACTTATCTTTTTGTTGTTGTTGTTGTTGCTGTTGCTGCTGCTGCAGTGCATGTGCAATGGCTGTGCAAAGGTTTTGAGGTTCCAGACGAATCGCTGCCCTATCTGCAGACAACCGGTCGACAGGCTTTTGGAGATCAAGGTCAGTGGTGGATCCGACAAATGA 1785 48.96 MASNRGQGGIQQLLAAEQEAQHIVNAARNGKTARLKQAKDEAEKEIAEYRAQVEYEFQKKLTESSGDSGANVKRLEQETDEKIHHLKNEASRISHGVVSMLLKQVTTNLRVWLEMSSGAEGCVGSWMMGVVSGVGGAFTQSHYTRHRTPQPNPTQPNPTQPLYSSSSSSPPSLPLSAIAFFYRILIPFSFPIVGFLSVSGNSMGNTSSSGANGRRRHGSRRSHPTPPPPAAPQPEITANRYVFAAATPYPSQYPNQHPSYYQYPAYYPPQPPPTSMPMPLPAPYDHHHRGAHPHMDPANWVGGRYPCGPVMPPQTPYVEHQKAVTIRNDVNLKKETLRIEPDSQNPGKFLVTFMFDATVPGSITVMFFAKEGEGCNLTPMKEDVLKPVTVDFEKGLGQKFRQPVGTGIELATFEEELLKLNEMDVYPLAIKAEALPDNQTGADGSQIPGTNNSQITQAVIEKDRGEYQVKVLKQILWVNNMRYELQEIFGIGNSVEGDVDGNDPGKECVICLSEPPDTTVLPCRHMVIVIISSPILSWATILIFLLLLLLLLLLLQCMCNGCAKVLRFQTNRCPICRQPVDRLLEIKVSGGSDK 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31383824 31389741 + Bpe013179.1 Bpe03g01286 101791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe03g01286 594 MobiDBLite consensus disorder prediction 143 168 - -
Bpe03g01286 594 MobiDBLite consensus disorder prediction 203 235 - -
Bpe03g01286 594 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 556 593 - -
Bpe03g01286 594 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 493 529 IPR013083 -
Bpe03g01286 594 Gene3D - 1 111 - -
Bpe03g01286 594 PANTHER MAHOGUNIN 556 593 IPR045194 GO:0061630
Bpe03g01286 594 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 507 577 IPR045195 -
Bpe03g01286 594 Pfam Vacuolar (H+)-ATPase G subunit 7 107 IPR005124 GO:0016471|GO:0046961|GO:1902600
Bpe03g01286 594 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 553 587 IPR013083 -
Bpe03g01286 594 PANTHER RING/U-BOX SUPERFAMILY PROTEIN-RELATED 203 533 - -
Bpe03g01286 594 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 6 107 IPR005124 GO:0016471|GO:0046961|GO:1902600
Bpe03g01286 594 Coils Coil 28 59 - -
Bpe03g01286 594 PANTHER MAHOGUNIN 203 533 IPR045194 GO:0061630
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g01286 Bpe-Chr3:31383824 Bpe14g01321 Bpe-Chr14:10219145 2.98E-78 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe03g01286 - - mcha:111015152 537.724